RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 APPP05067 770 aa18.48■□□□□ 0.55
AP4E1-202ENST00000558439 DDX11Q96FC9 970 aa18.48■□□□□ 0.55
AP4E1-202ENST00000558439 NECAB1Q8N987 351 aa18.47■□□□□ 0.55
AP4E1-202ENST00000558439 CAMK4Q16566 473 aa18.47■□□□□ 0.55
AP4E1-202ENST00000558439 SYTL4Q96C24 671 aaPredicted RBP18.47■□□□□ 0.55
AP4E1-202ENST00000558439 QRICH2Q9H0J4 1663 aa18.47■□□□□ 0.55
AP4E1-202ENST00000558439 NBPF7P0C2Y1 421 aaPredicted RBP18.47■□□□□ 0.55
AP4E1-202ENST00000558439 BRPF1P55201 1214 aaPredicted RBP18.47■□□□□ 0.55
AP4E1-202ENST00000558439 PLEKHG3A1L390 1219 aa18.46■□□□□ 0.55
AP4E1-202ENST00000558439 PPFIA3O75145 1194 aa18.46■□□□□ 0.55
AP4E1-202ENST00000558439 SASS6Q6UVJ0 657 aa18.46■□□□□ 0.55
AP4E1-202ENST00000558439 FAM135BQ49AJ0 1406 aa18.46■□□□□ 0.55
AP4E1-202ENST00000558439 IL17REQ8NFR9 667 aa18.46■□□□□ 0.55
AP4E1-202ENST00000558439 USP25Q9UHP3 1055 aa18.46■□□□□ 0.55
AP4E1-202ENST00000558439 HIP1O00291 1037 aa18.45■□□□□ 0.54
AP4E1-202ENST00000558439 CABP4P57796 275 aa18.45■□□□□ 0.54
AP4E1-202ENST00000558439 ZNF592Q92610 1267 aa18.45■□□□□ 0.54
AP4E1-202ENST00000558439 ATP5J2-PTCD1G3V325 749 aa18.45■□□□□ 0.54
AP4E1-202ENST00000558439 PTCD1O75127 700 aaKnown RBP18.45■□□□□ 0.54
AP4E1-202ENST00000558439 PDCP20941 246 aa18.45■□□□□ 0.54
AP4E1-202ENST00000558439 NRDCO43847 1150 aa18.45■□□□□ 0.54
AP4E1-202ENST00000558439 PALD1Q9ULE6 856 aa18.45■□□□□ 0.54
AP4E1-202ENST00000558439 CPLX1O14810 134 aa18.44■□□□□ 0.54
AP4E1-202ENST00000558439 STX6O43752 255 aa18.44■□□□□ 0.54
AP4E1-202ENST00000558439 KRT85P78386 507 aa18.44■□□□□ 0.54
AP4E1-202ENST00000558439 ANKRD24Q8TF21 1146 aa18.44■□□□□ 0.54
AP4E1-202ENST00000558439 TFIP11Q9UBB9 837 aaKnown RBP18.44■□□□□ 0.54
AP4E1-202ENST00000558439 CNPY2Q9Y2B0 182 aa18.44■□□□□ 0.54
AP4E1-202ENST00000558439 ROBO2Q9HCK4 1378 aa18.44■□□□□ 0.54
AP4E1-202ENST00000558439 SOS1Q07889 1333 aaPredicted RBP18.44■□□□□ 0.54
AP4E1-202ENST00000558439 AMOTQ4VCS5 1084 aa18.44■□□□□ 0.54
AP4E1-202ENST00000558439 KCNQ3O43525 872 aa18.43■□□□□ 0.54
AP4E1-202ENST00000558439 GJB2P29033 226 aa18.43■□□□□ 0.54
AP4E1-202ENST00000558439 USP48Q86UV5 1035 aa18.43■□□□□ 0.54
AP4E1-202ENST00000558439 TRIM5Q9C035 493 aa18.43■□□□□ 0.54
AP4E1-202ENST00000558439 USP44Q9H0E7 712 aa18.43■□□□□ 0.54
AP4E1-202ENST00000558439 NPHP1O15259 732 aa18.43■□□□□ 0.54
AP4E1-202ENST00000558439 STRN4Q9NRL3 753 aa18.43■□□□□ 0.54
AP4E1-202ENST00000558439 MAP3K5Q99683 1374 aa18.43■□□□□ 0.54
AP4E1-202ENST00000558439 TMEM2Q9UHN6 1383 aa18.43■□□□□ 0.54
AP4E1-202ENST00000558439 RBSNQ9H1K0 784 aa18.42■□□□□ 0.54
AP4E1-202ENST00000558439 ABCA9Q8IUA7 1624 aa18.42■□□□□ 0.54
AP4E1-202ENST00000558439 LARP1Q6PKG0 1096 aaKnown RBP18.42■□□□□ 0.54
AP4E1-202ENST00000558439 INO80Q9ULG1 1556 aaPredicted RBP18.42■□□□□ 0.54
AP4E1-202ENST00000558439 SBNO1A3KN83 1393 aa18.42■□□□□ 0.54
AP4E1-202ENST00000558439 LRSAM1Q6UWE0 723 aa18.42■□□□□ 0.54
AP4E1-202ENST00000558439 ZSCAN31Q96LW9 406 aaPredicted RBP18.42■□□□□ 0.54
AP4E1-202ENST00000558439 AATKQ6ZMQ8 1374 aa18.41■□□□□ 0.54
AP4E1-202ENST00000558439 PNPLA6Q8IY17 1366 aa18.41■□□□□ 0.54
AP4E1-202ENST00000558439 HCLS1P14317 486 aaPredicted RBP18.41■□□□□ 0.54
AP4E1-202ENST00000558439 AK2P54819 239 aa18.41■□□□□ 0.54
AP4E1-202ENST00000558439 CHRNA2Q15822 529 aa18.41■□□□□ 0.54
AP4E1-202ENST00000558439 TBX22Q9Y458 520 aa18.41■□□□□ 0.54
AP4E1-202ENST00000558439 FKBP4Q02790 459 aaKnown RBP eCLIP18.41■□□□□ 0.54
AP4E1-202ENST00000558439 NBPF6Q5VWK0 638 aa18.41■□□□□ 0.54
AP4E1-202ENST00000558439 UBE3BQ7Z3V4 1068 aa18.41■□□□□ 0.54
AP4E1-202ENST00000558439 UNC5CLQ8IV45 518 aa18.41■□□□□ 0.54
AP4E1-202ENST00000558439 NBPF4Q96M43 638 aa18.41■□□□□ 0.54
AP4E1-202ENST00000558439 LMBRD1Q9NUN5 540 aa18.41■□□□□ 0.54
AP4E1-202ENST00000558439 KIAA0232Q92628 1395 aa18.4■□□□□ 0.54
AP4E1-202ENST00000558439 ANAPC15P60006 121 aa18.4■□□□□ 0.54
AP4E1-202ENST00000558439 ZNF830Q96NB3 372 aaPredicted RBP18.4■□□□□ 0.54
AP4E1-202ENST00000558439 LETM1O95202 739 aaPredicted RBP18.4■□□□□ 0.54
AP4E1-202ENST00000558439 SPATA32Q96LK8 384 aa18.4■□□□□ 0.54
AP4E1-202ENST00000558439 TNMDQ9H2S6 317 aa18.4■□□□□ 0.54
AP4E1-202ENST00000558439 HYPKQ9NX55 129 aa18.4■□□□□ 0.54
AP4E1-202ENST00000558439 FAM177BA6PVY3 158 aa18.4■□□□□ 0.54
AP4E1-202ENST00000558439 TPM2P07951 284 aa18.4■□□□□ 0.54
AP4E1-202ENST00000558439 CCDC192P0DO97 292 aa18.4■□□□□ 0.54
AP4E1-202ENST00000558439 GIMAP6Q6P9H5 292 aa18.4■□□□□ 0.54
AP4E1-202ENST00000558439 CCDC73Q6ZRK6 1079 aa18.4■□□□□ 0.54
AP4E1-202ENST00000558439 SETBP1Q9Y6X0 1596 aa18.4■□□□□ 0.54
AP4E1-202ENST00000558439 A0A087WZG4 1122 aa18.39■□□□□ 0.53
AP4E1-202ENST00000558439 FSD2A1L4K1 749 aa18.39■□□□□ 0.53
AP4E1-202ENST00000558439 KRT28Q7Z3Y7 464 aa18.39■□□□□ 0.53
AP4E1-202ENST00000558439 CKAP2LQ8IYA6 745 aa18.39■□□□□ 0.53
AP4E1-202ENST00000558439 KLHDC4Q8TBB5 520 aa18.39■□□□□ 0.53
AP4E1-202ENST00000558439 EVI5LQ96CN4 794 aa18.39■□□□□ 0.53
AP4E1-202ENST00000558439 SDF4Q9BRK5 362 aa18.39■□□□□ 0.53
AP4E1-202ENST00000558439 TOM1L2Q6ZVM7 507 aa18.39■□□□□ 0.53
AP4E1-202ENST00000558439 COPS6Q7L5N1 327 aa18.39■□□□□ 0.53
AP4E1-202ENST00000558439 ARHGAP31Q2M1Z3 1444 aa18.39■□□□□ 0.53
AP4E1-202ENST00000558439 ATP7BP35670 1465 aa18.39■□□□□ 0.53
AP4E1-202ENST00000558439 UQCRHLA0A096LP55 91 aa18.38■□□□□ 0.53
AP4E1-202ENST00000558439 UQCRHP07919 91 aa18.38■□□□□ 0.53
AP4E1-202ENST00000558439 IQSEC2Q5JU85 1478 aa18.38■□□□□ 0.53
AP4E1-202ENST00000558439 CCDC183Q5T5S1 534 aa18.38■□□□□ 0.53
AP4E1-202ENST00000558439 FMNL2Q96PY5 1086 aa18.38■□□□□ 0.53
AP4E1-202ENST00000558439 KIDINS220Q9ULH0 1771 aa18.38■□□□□ 0.53
AP4E1-202ENST00000558439 XAGE3Q8WTP9 111 aa18.38■□□□□ 0.53
AP4E1-202ENST00000558439 ANKRD1Q15327 319 aa18.38■□□□□ 0.53
AP4E1-202ENST00000558439 KSR2Q6VAB6 950 aa18.38■□□□□ 0.53
AP4E1-202ENST00000558439 RBM8AQ9Y5S9 174 aaKnown RBP18.38■□□□□ 0.53
AP4E1-202ENST00000558439 GRM8O00222 908 aa18.37■□□□□ 0.53
AP4E1-202ENST00000558439 ZSCAN22P10073 491 aaPredicted RBP18.37■□□□□ 0.53
AP4E1-202ENST00000558439 KIF2CQ99661 725 aa18.37■□□□□ 0.53
AP4E1-202ENST00000558439 GCP02774 474 aa18.37■□□□□ 0.53
AP4E1-202ENST00000558439 AKAP4Q5JQC9 854 aa18.37■□□□□ 0.53
AP4E1-202ENST00000558439 RALYLQ86SE5 291 aaKnown RBP18.37■□□□□ 0.53
AP4E1-202ENST00000558439 LRRC2Q9BYS8 371 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms