RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 HEG1Q9ULI3 1381 aa15.87■□□□□ 0.13
HERC1-202ENST00000558324 BTBD11A6QL63 1104 aa15.87■□□□□ 0.13
HERC1-202ENST00000558324 KCNQ3O43525 872 aa15.87■□□□□ 0.13
HERC1-202ENST00000558324 DDR1Q08345 913 aa15.87■□□□□ 0.13
HERC1-202ENST00000558324 DCTN1Q14203 1278 aa15.87■□□□□ 0.13
HERC1-202ENST00000558324 ZNF330Q9Y3S2 320 aaPredicted RBP15.87■□□□□ 0.13
HERC1-202ENST00000558324 A0A0G2JLW4 131 aa15.86■□□□□ 0.13
HERC1-202ENST00000558324 STARD3NLO95772 234 aa15.86■□□□□ 0.13
HERC1-202ENST00000558324 FMNL2Q96PY5 1086 aa15.86■□□□□ 0.13
HERC1-202ENST00000558324 NEFMP07197 916 aa15.85■□□□□ 0.13
HERC1-202ENST00000558324 KIAA1551Q9HCM1 1747 aa15.85■□□□□ 0.13
HERC1-202ENST00000558324 N4BP2Q86UW6 1770 aaPredicted RBP15.85■□□□□ 0.13
HERC1-202ENST00000558324 KIF13BQ9NQT8 1826 aa15.84■□□□□ 0.13
HERC1-202ENST00000558324 DPEP1P16444 411 aa15.84■□□□□ 0.13
HERC1-202ENST00000558324 TGFB2P61812 414 aa15.84■□□□□ 0.13
HERC1-202ENST00000558324 NARFQ9UHQ1 456 aa15.84■□□□□ 0.13
HERC1-202ENST00000558324 POLRMTO00411 1230 aaKnown RBP15.83■□□□□ 0.12
HERC1-202ENST00000558324 BCS1LQ9Y276 419 aa15.83■□□□□ 0.12
HERC1-202ENST00000558324 NFIXQ14938 502 aa15.82■□□□□ 0.12
HERC1-202ENST00000558324 RALBP1Q15311 655 aa15.82■□□□□ 0.12
HERC1-202ENST00000558324 TEX13AQ9BXU3 409 aaPredicted RBP15.82■□□□□ 0.12
HERC1-202ENST00000558324 BCL2L12Q9HB09 334 aa15.82■□□□□ 0.12
HERC1-202ENST00000558324 PRAMEF22A3QJZ6 481 aa15.81■□□□□ 0.12
HERC1-202ENST00000558324 A1BGP04217 495 aa15.81■□□□□ 0.12
HERC1-202ENST00000558324 TM4SF1P30408 202 aa15.81■□□□□ 0.12
HERC1-202ENST00000558324 EIF5P55010 431 aaKnown RBP15.81■□□□□ 0.12
HERC1-202ENST00000558324 BICDL1Q6ZP65 573 aa15.81■□□□□ 0.12
HERC1-202ENST00000558324 MAPK8IP3Q9UPT6 1336 aa15.81■□□□□ 0.12
HERC1-202ENST00000558324 HTATSF1O43719 755 aaKnown RBP15.8■□□□□ 0.12
HERC1-202ENST00000558324 PIP4K2AP48426 406 aaPredicted RBP15.8■□□□□ 0.12
HERC1-202ENST00000558324 PLEKHF1Q96S99 279 aa15.8■□□□□ 0.12
HERC1-202ENST00000558324 MIS18AQ9NYP9 233 aa15.8■□□□□ 0.12
HERC1-202ENST00000558324 TBC1D2BQ9UPU7 963 aa15.8■□□□□ 0.12
HERC1-202ENST00000558324 ATP10DQ9P241 1426 aa15.79■□□□□ 0.12
HERC1-202ENST00000558324 A0A087WZG4 1122 aa15.79■□□□□ 0.12
HERC1-202ENST00000558324 CHRNA5P30532 468 aa15.79■□□□□ 0.12
HERC1-202ENST00000558324 NFE2L2Q16236 605 aa15.79■□□□□ 0.12
HERC1-202ENST00000558324 NPM2Q86SE8 214 aaKnown RBP15.79■□□□□ 0.12
HERC1-202ENST00000558324 THUMPD2Q9BTF0 503 aaKnown RBP15.79■□□□□ 0.12
HERC1-202ENST00000558324 USP16Q9Y5T5 823 aa15.79■□□□□ 0.12
HERC1-202ENST00000558324 SCN7AQ01118 1682 aa15.79■□□□□ 0.12
HERC1-202ENST00000558324 MYBBP1AQ9BQG0 1328 aaKnown RBP15.78■□□□□ 0.12
HERC1-202ENST00000558324 IL6STP40189 918 aaPredicted RBP15.78■□□□□ 0.12
HERC1-202ENST00000558324 TAF7Q15545 349 aaPredicted RBP15.78■□□□□ 0.12
HERC1-202ENST00000558324 ZNF526Q8TF50 670 aaPredicted RBP15.78■□□□□ 0.12
HERC1-202ENST00000558324 DLG5Q8TDM6 1919 aa15.77■□□□□ 0.12
HERC1-202ENST00000558324 SERPINB2P05120 415 aa15.77■□□□□ 0.12
HERC1-202ENST00000558324 SNRPA1P09661 255 aaKnown RBP15.77■□□□□ 0.12
HERC1-202ENST00000558324 KCNA3P22001 575 aa15.77■□□□□ 0.12
HERC1-202ENST00000558324 PNNQ9H307 717 aaKnown RBP15.77■□□□□ 0.12
HERC1-202ENST00000558324 PIM2Q9P1W9 311 aa15.77■□□□□ 0.12
HERC1-202ENST00000558324 GIGYF1O75420 1035 aaPredicted RBP15.76■□□□□ 0.11
HERC1-202ENST00000558324 TBC1D9BQ66K14 1250 aa15.76■□□□□ 0.11
HERC1-202ENST00000558324 ARHGAP27Q6ZUM4 889 aa15.76■□□□□ 0.11
HERC1-202ENST00000558324 ADCY9O60503 1353 aa15.75■□□□□ 0.11
HERC1-202ENST00000558324 CARMIL3Q8ND23 1372 aa15.75■□□□□ 0.11
HERC1-202ENST00000558324 AFDNP55196 1824 aaKnown RBP15.75■□□□□ 0.11
HERC1-202ENST00000558324 DALRD3Q5D0E6 543 aaKnown RBP15.75■□□□□ 0.11
HERC1-202ENST00000558324 DZIP3Q86Y13 1208 aaKnown RBP15.75■□□□□ 0.11
HERC1-202ENST00000558324 BRCA1P38398 1863 aaKnown RBP15.75■□□□□ 0.11
HERC1-202ENST00000558324 NRXN2Q9P2S2 1712 aa15.74■□□□□ 0.11
HERC1-202ENST00000558324 CAMTA2O94983 1202 aa15.74■□□□□ 0.11
HERC1-202ENST00000558324 CCDC146Q8IYE0 955 aa15.74■□□□□ 0.11
HERC1-202ENST00000558324 CCDC24Q8N4L8 307 aa15.74■□□□□ 0.11
HERC1-202ENST00000558324 GPBP1L1Q9HC44 474 aaPredicted RBP15.73■□□□□ 0.11
HERC1-202ENST00000558324 BCORQ6W2J9 1755 aa15.72■□□□□ 0.11
HERC1-202ENST00000558324 KDM3BQ7LBC6 1761 aa15.72■□□□□ 0.11
HERC1-202ENST00000558324 NBPF26B4DH59 902 aa15.72■□□□□ 0.11
HERC1-202ENST00000558324 RIPK4P57078 832 aa15.72■□□□□ 0.11
HERC1-202ENST00000558324 C1QTNF8P60827 252 aa15.72■□□□□ 0.11
HERC1-202ENST00000558324 NBPF10Q6P3W6 841 aaKnown RBP15.72■□□□□ 0.11
HERC1-202ENST00000558324 C2CD5Q86YS7 1000 aa15.72■□□□□ 0.11
HERC1-202ENST00000558324 NBPF15Q8N660 670 aa15.72■□□□□ 0.11
HERC1-202ENST00000558324 PNISRQ8TF01 805 aaKnown RBP15.72■□□□□ 0.11
HERC1-202ENST00000558324 RRP7AQ9Y3A4 280 aaKnown RBP15.72■□□□□ 0.11
HERC1-202ENST00000558324 NPHP1O15259 732 aa15.71■□□□□ 0.11
HERC1-202ENST00000558324 WDR43Q15061 677 aaKnown RBP eCLIP15.71■□□□□ 0.11
HERC1-202ENST00000558324 SETDB2Q96T68 719 aa15.71■□□□□ 0.11
HERC1-202ENST00000558324 LAMB4A4D0S4 1761 aa15.71■□□□□ 0.11
HERC1-202ENST00000558324 EIF4A1P60842 406 aaKnown RBP15.7■□□□□ 0.1
HERC1-202ENST00000558324 NEUROD2Q15784 382 aa15.7■□□□□ 0.1
HERC1-202ENST00000558324 PRR5LQ6MZQ0 368 aa15.7■□□□□ 0.1
HERC1-202ENST00000558324 NGEFQ8N5V2 710 aa15.7■□□□□ 0.1
HERC1-202ENST00000558324 ARFGEF1Q9Y6D6 1849 aa15.7■□□□□ 0.1
HERC1-202ENST00000558324 H0YIN7 160 aa15.69■□□□□ 0.1
HERC1-202ENST00000558324 TMPOP42166 694 aaKnown RBP15.69■□□□□ 0.1
HERC1-202ENST00000558324 CNBD1Q8NA66 436 aa15.69■□□□□ 0.1
HERC1-202ENST00000558324 PRKRIP1Q9H875 184 aaPredicted RBP15.69■□□□□ 0.1
HERC1-202ENST00000558324 TSPYL4Q9UJ04 414 aa15.69■□□□□ 0.1
HERC1-202ENST00000558324 ZNF652Q9Y2D9 606 aa15.68■□□□□ 0.1
HERC1-202ENST00000558324 DLEC1Q9Y238 1755 aa15.67■□□□□ 0.1
HERC1-202ENST00000558324 SENP3-EIF4A1A0A087X0R7 540 aa15.67■□□□□ 0.1
HERC1-202ENST00000558324 LMOD3Q0VAK6 560 aa15.67■□□□□ 0.1
HERC1-202ENST00000558324 C9orf131Q5VYM1 1079 aa15.67■□□□□ 0.1
HERC1-202ENST00000558324 ZNF622Q969S3 477 aaKnown RBP eCLIP15.67■□□□□ 0.16e-8■■□□□ 13.3
HERC1-202ENST00000558324 ANKRD31Q8N7Z5 1873 aa15.67■□□□□ 0.1
HERC1-202ENST00000558324 COL11A2P13942 1736 aaPredicted RBP15.66■□□□□ 0.1
HERC1-202ENST00000558324 FAM177BA6PVY3 158 aa15.66■□□□□ 0.1
HERC1-202ENST00000558324 MYL6BP14649 208 aa15.66■□□□□ 0.1
HERC1-202ENST00000558324 ST5P78524 1137 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms