RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 CANXP27824 592 aaKnown RBP18.2■□□□□ 0.5
SNRPA1-204ENST00000558020 DDR1Q08345 913 aa18.2■□□□□ 0.5
SNRPA1-204ENST00000558020 ZNF790Q6PG37 636 aa18.2■□□□□ 0.5
SNRPA1-204ENST00000558020 COL3A1P02461 1466 aaPredicted RBP18.2■□□□□ 0.5
SNRPA1-204ENST00000558020 N4BP2Q86UW6 1770 aaPredicted RBP18.19■□□□□ 0.5
SNRPA1-204ENST00000558020 POLRMTO00411 1230 aaKnown RBP18.19■□□□□ 0.5
SNRPA1-204ENST00000558020 KCNA3P22001 575 aa18.19■□□□□ 0.5
SNRPA1-204ENST00000558020 PRKAR2BP31323 418 aa18.19■□□□□ 0.5
SNRPA1-204ENST00000558020 ZBTB1Q9Y2K1 713 aa18.19■□□□□ 0.5
SNRPA1-204ENST00000558020 ADAMTS7Q9UKP4 1686 aa18.18■□□□□ 0.5
SNRPA1-204ENST00000558020 COL15A1P39059 1388 aa18.18■□□□□ 0.5
SNRPA1-204ENST00000558020 U2AF1L5P0DN76 240 aaPredicted RBP18.18■□□□□ 0.5
SNRPA1-204ENST00000558020 U2AF1Q01081 240 aaKnown RBP eCLIP18.18■□□□□ 0.5
SNRPA1-204ENST00000558020 RTF1Q92541 710 aaKnown RBP18.18■□□□□ 0.5
SNRPA1-204ENST00000558020 FMNL2Q96PY5 1086 aa18.18■□□□□ 0.5
SNRPA1-204ENST00000558020 VIRMAQ69YN4 1812 aaKnown RBP18.18■□□□□ 0.5
SNRPA1-204ENST00000558020 KCPQ6ZWJ8 1503 aa18.18■□□□□ 0.5
SNRPA1-204ENST00000558020 PPP2R1AP30153 589 aa18.17■□□□□ 0.5
SNRPA1-204ENST00000558020 NFIXQ14938 502 aa18.17■□□□□ 0.5
SNRPA1-204ENST00000558020 ZNF496Q96IT1 587 aaPredicted RBP18.17■□□□□ 0.5
SNRPA1-204ENST00000558020 PHACTR3Q96KR7 559 aa18.17■□□□□ 0.5
SNRPA1-204ENST00000558020 BTBD11A6QL63 1104 aa18.16■□□□□ 0.5
SNRPA1-204ENST00000558020 RSPH6AQ9H0K4 717 aa18.16■□□□□ 0.5
SNRPA1-204ENST00000558020 HEG1Q9ULI3 1381 aa18.16■□□□□ 0.5
SNRPA1-204ENST00000558020 SERPINB2P05120 415 aa18.15■□□□□ 0.5
SNRPA1-204ENST00000558020 NEFMP07197 916 aa18.15■□□□□ 0.5
SNRPA1-204ENST00000558020 EIF5P55010 431 aaKnown RBP18.15■□□□□ 0.5
SNRPA1-204ENST00000558020 KIAA1551Q9HCM1 1747 aa18.15■□□□□ 0.5
SNRPA1-204ENST00000558020 CHRNA5P30532 468 aa18.14■□□□□ 0.49
SNRPA1-204ENST00000558020 IL6STP40189 918 aaPredicted RBP18.13■□□□□ 0.49
SNRPA1-204ENST00000558020 ZNF330Q9Y3S2 320 aaPredicted RBP18.13■□□□□ 0.49
SNRPA1-204ENST00000558020 CEMIPQ8WUJ3 1361 aa18.13■□□□□ 0.49
SNRPA1-204ENST00000558020 UBR2Q8IWV8 1755 aa18.12■□□□□ 0.49
SNRPA1-204ENST00000558020 H0YIN7 160 aa18.12■□□□□ 0.49
SNRPA1-204ENST00000558020 HTATSF1O43719 755 aaKnown RBP18.12■□□□□ 0.49
SNRPA1-204ENST00000558020 C9orf131Q5VYM1 1079 aa18.12■□□□□ 0.49
SNRPA1-204ENST00000558020 PDZRN3Q9UPQ7 1066 aa18.12■□□□□ 0.49
SNRPA1-204ENST00000558020 BICDL1Q6ZP65 573 aa18.11■□□□□ 0.49
SNRPA1-204ENST00000558020 BCL2L12Q9HB09 334 aa18.11■□□□□ 0.49
SNRPA1-204ENST00000558020 BRCA1P38398 1863 aaKnown RBP18.1■□□□□ 0.49
SNRPA1-204ENST00000558020 KIF3CO14782 793 aa18.1■□□□□ 0.49
SNRPA1-204ENST00000558020 HSPA6P17066 643 aa18.1■□□□□ 0.49
SNRPA1-204ENST00000558020 TTLL6Q8N841 843 aa18.1■□□□□ 0.49
SNRPA1-204ENST00000558020 TBC1D2BQ9UPU7 963 aa18.1■□□□□ 0.49
SNRPA1-204ENST00000558020 ARFGEF1Q9Y6D6 1849 aa18.09■□□□□ 0.49
SNRPA1-204ENST00000558020 KDM2BQ8NHM5 1336 aa18.09■□□□□ 0.49
SNRPA1-204ENST00000558020 NPHP1O15259 732 aa18.09■□□□□ 0.49
SNRPA1-204ENST00000558020 TOMM70O94826 608 aa18.09■□□□□ 0.49
SNRPA1-204ENST00000558020 SNRPA1P09661 255 aaKnown RBP18.09■□□□□ 0.49
SNRPA1-204ENST00000558020 C2CD5Q86YS7 1000 aa18.09■□□□□ 0.49
SNRPA1-204ENST00000558020 SETDB2Q96T68 719 aa18.09■□□□□ 0.49
SNRPA1-204ENST00000558020 PNNQ9H307 717 aaKnown RBP18.09■□□□□ 0.49
SNRPA1-204ENST00000558020 A1BGP04217 495 aa18.08■□□□□ 0.48
SNRPA1-204ENST00000558020 PDE6BP35913 854 aa18.08■□□□□ 0.48
SNRPA1-204ENST00000558020 MCM10Q7L590 875 aa18.08■□□□□ 0.48
SNRPA1-204ENST00000558020 C16orf71Q8IYS4 520 aaPredicted RBP18.08■□□□□ 0.48
SNRPA1-204ENST00000558020 BRIP1Q9BX63 1249 aa18.08■□□□□ 0.48
SNRPA1-204ENST00000558020 RNF181Q9P0P0 153 aa18.08■□□□□ 0.48
SNRPA1-204ENST00000558020 CEP350Q5VT06 3117 aa18.07■□□□□ 0.48
SNRPA1-204ENST00000558020 TAF7Q15545 349 aaPredicted RBP18.07■□□□□ 0.48
SNRPA1-204ENST00000558020 TBC1D9BQ66K14 1250 aa18.07■□□□□ 0.48
SNRPA1-204ENST00000558020 SIPA1L3O60292 1781 aaPredicted RBP18.07■□□□□ 0.48
SNRPA1-204ENST00000558020 KCNQ3O43525 872 aa18.06■□□□□ 0.48
SNRPA1-204ENST00000558020 CARMIL3Q8ND23 1372 aa18.05■□□□□ 0.48
SNRPA1-204ENST00000558020 CLEC4GQ6UXB4 293 aa18.05■□□□□ 0.48
SNRPA1-204ENST00000558020 DZIP3Q86Y13 1208 aaKnown RBP18.05■□□□□ 0.48
SNRPA1-204ENST00000558020 ZNF652Q9Y2D9 606 aa18.05■□□□□ 0.48
SNRPA1-204ENST00000558020 USP16Q9Y5T5 823 aa18.05■□□□□ 0.48
SNRPA1-204ENST00000558020 AFDNP55196 1824 aaKnown RBP18.05■□□□□ 0.48
SNRPA1-204ENST00000558020 LMNB1P20700 586 aa18.04■□□□□ 0.48
SNRPA1-204ENST00000558020 PNISRQ8TF01 805 aaKnown RBP18.04■□□□□ 0.48
SNRPA1-204ENST00000558020 ZNF622Q969S3 477 aaKnown RBP eCLIP18.04■□□□□ 0.48
SNRPA1-204ENST00000558020 NMRK2Q9NPI5 230 aa18.04■□□□□ 0.48
SNRPA1-204ENST00000558020 NRXN2Q9P2S2 1712 aa18.03■□□□□ 0.48
SNRPA1-204ENST00000558020 ZC3H4Q9UPT8 1303 aaKnown RBP18.03■□□□□ 0.48
SNRPA1-204ENST00000558020 CAMTA2O94983 1202 aa18.03■□□□□ 0.48
SNRPA1-204ENST00000558020 ST5P78524 1137 aa18.03■□□□□ 0.48
SNRPA1-204ENST00000558020 DCTN1Q14203 1278 aa18.03■□□□□ 0.48
SNRPA1-204ENST00000558020 CNBD1Q8NA66 436 aa18.03■□□□□ 0.48
SNRPA1-204ENST00000558020 APLP1P51693 650 aa18.02■□□□□ 0.48
SNRPA1-204ENST00000558020 PRR5LQ6MZQ0 368 aa18.02■□□□□ 0.48
SNRPA1-204ENST00000558020 RGL2O15211 777 aa18.01■□□□□ 0.47
SNRPA1-204ENST00000558020 RBM46Q8TBY0 533 aaKnown RBP18.01■□□□□ 0.47
SNRPA1-204ENST00000558020 CNKSR1Q969H4 720 aa18■□□□□ 0.47
SNRPA1-204ENST00000558020 MAPK8IP3Q9UPT6 1336 aa17.99■□□□□ 0.47
SNRPA1-204ENST00000558020 TPTE2Q6XPS3 522 aa17.99■□□□□ 0.47
SNRPA1-204ENST00000558020 NBPF5PQ86XG9 351 aaPredicted RBP17.99■□□□□ 0.47
SNRPA1-204ENST00000558020 RRAGCQ9HB90 399 aa17.99■□□□□ 0.47
SNRPA1-204ENST00000558020 PRAMEF22A3QJZ6 481 aa17.98■□□□□ 0.47
SNRPA1-204ENST00000558020 PIP4K2AP48426 406 aaPredicted RBP17.98■□□□□ 0.47
SNRPA1-204ENST00000558020 RASSF7Q02833 373 aa17.98■□□□□ 0.47
SNRPA1-204ENST00000558020 FSTL1Q12841 308 aa17.98■□□□□ 0.47
SNRPA1-204ENST00000558020 NFE2L2Q16236 605 aa17.98■□□□□ 0.47
SNRPA1-204ENST00000558020 SOGA3Q5TF21 947 aa17.98■□□□□ 0.47
SNRPA1-204ENST00000558020 STYK1Q6J9G0 422 aa17.98■□□□□ 0.47
SNRPA1-204ENST00000558020 MIS18AQ9NYP9 233 aa17.98■□□□□ 0.47
SNRPA1-204ENST00000558020 SBF1O95248 1867 aa17.97■□□□□ 0.47
SNRPA1-204ENST00000558020 SCN7AQ01118 1682 aa17.97■□□□□ 0.47
SNRPA1-204ENST00000558020 C21orf2O43822 256 aa17.97■□□□□ 0.47
SNRPA1-204ENST00000558020 RALBP1Q15311 655 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms