RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 COL22A1Q8NFW1 1626 aaPredicted RBP16.18■□□□□ 0.18
CPNE6-204ENST00000557829 CACNA1FO60840 1977 aa16.17■□□□□ 0.18
CPNE6-204ENST00000557829 TUBGCP6Q96RT7 1819 aa16.17■□□□□ 0.18
CPNE6-204ENST00000557829 CSB-PGBD3P0DP91 1061 aa16.17■□□□□ 0.18
CPNE6-204ENST00000557829 ERC2O15083 957 aa16.16■□□□□ 0.18
CPNE6-204ENST00000557829 CCT4P50991 539 aaKnown RBP16.16■□□□□ 0.18
CPNE6-204ENST00000557829 LMO7Q8WWI1 1683 aa16.16■□□□□ 0.18
CPNE6-204ENST00000557829 ANP32BQ92688 251 aaKnown RBP16.16■□□□□ 0.18
CPNE6-204ENST00000557829 NASPP49321 788 aaPredicted RBP16.15■□□□□ 0.18
CPNE6-204ENST00000557829 NAP1L5Q96NT1 182 aaPredicted RBP16.15■□□□□ 0.18
CPNE6-204ENST00000557829 LMBRD1Q9NUN5 540 aa16.15■□□□□ 0.18
CPNE6-204ENST00000557829 SPATA31A6Q5VVP1 1343 aa16.14■□□□□ 0.17
CPNE6-204ENST00000557829 MEIS3Q99687 375 aa16.14■□□□□ 0.17
CPNE6-204ENST00000557829 N4BP2Q86UW6 1770 aaPredicted RBP16.14■□□□□ 0.17
CPNE6-204ENST00000557829 MCM2P49736 904 aa16.14■□□□□ 0.17
CPNE6-204ENST00000557829 OTUD7AQ8TE49 926 aaPredicted RBP16.14■□□□□ 0.17
CPNE6-204ENST00000557829 COL5A2P05997 1499 aaPredicted RBP16.13■□□□□ 0.17
CPNE6-204ENST00000557829 ERBB4Q15303 1308 aa16.13■□□□□ 0.17
CPNE6-204ENST00000557829 ADAMTS2O95450 1211 aa16.13■□□□□ 0.17
CPNE6-204ENST00000557829 HS1BP3Q53T59 392 aa16.13■□□□□ 0.17
CPNE6-204ENST00000557829 SLC4A2P04920 1241 aa16.13■□□□□ 0.17
CPNE6-204ENST00000557829 FAM208AQ9UK61 1670 aaKnown RBP16.12■□□□□ 0.17
CPNE6-204ENST00000557829 WDR17Q8IZU2 1322 aa16.12■□□□□ 0.17
CPNE6-204ENST00000557829 GNAT3A8MTJ3 354 aa16.12■□□□□ 0.17
CPNE6-204ENST00000557829 KRT24Q2M2I5 525 aa16.12■□□□□ 0.17
CPNE6-204ENST00000557829 MCTP1Q6DN14 999 aa16.12■□□□□ 0.17
CPNE6-204ENST00000557829 RTF1Q92541 710 aaKnown RBP16.12■□□□□ 0.17
CPNE6-204ENST00000557829 MAP3K5Q99683 1374 aa16.12■□□□□ 0.17
CPNE6-204ENST00000557829 SOS1Q07889 1333 aaPredicted RBP16.12■□□□□ 0.17
CPNE6-204ENST00000557829 HTATSF1O43719 755 aaKnown RBP16.11■□□□□ 0.17
CPNE6-204ENST00000557829 SMARCA5O60264 1052 aaPredicted RBP16.11■□□□□ 0.17
CPNE6-204ENST00000557829 PDE1AP54750 535 aa16.11■□□□□ 0.17
CPNE6-204ENST00000557829 STRN4Q9NRL3 753 aa16.11■□□□□ 0.17
CPNE6-204ENST00000557829 IL17RAQ96F46 866 aa16.11■□□□□ 0.17
CPNE6-204ENST00000557829 RGS17Q9UGC6 210 aaPredicted RBP16.11■□□□□ 0.17
CPNE6-204ENST00000557829 MEGF6O75095 1541 aa16.1■□□□□ 0.17
CPNE6-204ENST00000557829 EPB41L2O43491 1005 aaKnown RBP16.1■□□□□ 0.17
CPNE6-204ENST00000557829 PLEKHO1Q53GL0 409 aaPredicted RBP16.1■□□□□ 0.17
CPNE6-204ENST00000557829 LARP1Q6PKG0 1096 aaKnown RBP16.1■□□□□ 0.17
CPNE6-204ENST00000557829 GNAI2P04899 355 aa16.1■□□□□ 0.17
CPNE6-204ENST00000557829 ZNF530Q6P9A1 599 aaPredicted RBP16.1■□□□□ 0.17
CPNE6-204ENST00000557829 TOM1L2Q6ZVM7 507 aa16.1■□□□□ 0.17
CPNE6-204ENST00000557829 IL17REQ8NFR9 667 aa16.1■□□□□ 0.17
CPNE6-204ENST00000557829 BTG4Q9NY30 223 aa16.1■□□□□ 0.17
CPNE6-204ENST00000557829 SALL3Q9BXA9 1300 aa16.09■□□□□ 0.17
CPNE6-204ENST00000557829 ANAPC15P60006 121 aa16.09■□□□□ 0.17
CPNE6-204ENST00000557829 ZSCAN23Q3MJ62 389 aa16.09■□□□□ 0.17
CPNE6-204ENST00000557829 ZSCAN30Q86W11 494 aa16.09■□□□□ 0.17
CPNE6-204ENST00000557829 RAPGEF4Q8WZA2 1011 aa16.09■□□□□ 0.17
CPNE6-204ENST00000557829 AMOTQ4VCS5 1084 aa16.09■□□□□ 0.17
CPNE6-204ENST00000557829 GNAI3P08754 354 aa16.08■□□□□ 0.16
CPNE6-204ENST00000557829 EVA1CP58658 441 aa16.08■□□□□ 0.16
CPNE6-204ENST00000557829 C8orf37Q96NL8 207 aa16.08■□□□□ 0.16
CPNE6-204ENST00000557829 MIS18AQ9NYP9 233 aa16.08■□□□□ 0.16
CPNE6-204ENST00000557829 TPM2P07951 284 aa16.07■□□□□ 0.16
CPNE6-204ENST00000557829 TATP17735 454 aaPredicted RBP16.07■□□□□ 0.16
CPNE6-204ENST00000557829 MCCP23508 829 aa16.07■□□□□ 0.16
CPNE6-204ENST00000557829 SRCIN1Q9C0H9 1055 aa16.07■□□□□ 0.16
CPNE6-204ENST00000557829 TSPYL4Q9UJ04 414 aa16.07■□□□□ 0.16
CPNE6-204ENST00000557829 ZDHHC9Q9Y397 364 aa16.07■□□□□ 0.16
CPNE6-204ENST00000557829 CUL4AQ13619 759 aa16.07■□□□□ 0.16
CPNE6-204ENST00000557829 MEX3CQ5U5Q3 659 aaKnown RBP16.07■□□□□ 0.16
CPNE6-204ENST00000557829 LGR6Q9HBX8 967 aa16.07■□□□□ 0.16
CPNE6-204ENST00000557829 BABAM1Q9NWV8 329 aa16.07■□□□□ 0.16
CPNE6-204ENST00000557829 AOX1Q06278 1338 aa16.07■□□□□ 0.16
CPNE6-204ENST00000557829 AKAP4Q5JQC9 854 aa16.06■□□□□ 0.16
CPNE6-204ENST00000557829 CAVIN1Q6NZI2 390 aaKnown RBP16.06■□□□□ 0.16
CPNE6-204ENST00000557829 INTS4Q96HW7 963 aaKnown RBP16.06■□□□□ 0.16
CPNE6-204ENST00000557829 CARD10Q9BWT7 1032 aa16.06■□□□□ 0.16
CPNE6-204ENST00000557829 STAP2Q9UGK3 403 aa16.06■□□□□ 0.16
CPNE6-204ENST00000557829 KDM3BQ7LBC6 1761 aa16.06■□□□□ 0.16
CPNE6-204ENST00000557829 EP400Q96L91 3159 aa16.06■□□□□ 0.16
CPNE6-204ENST00000557829 PXDNLA1KZ92 1463 aa16.06■□□□□ 0.16
CPNE6-204ENST00000557829 ATP8B2P98198 1209 aa16.06■□□□□ 0.16
CPNE6-204ENST00000557829 MPRIPQ6WCQ1 1025 aa16.06■□□□□ 0.16
CPNE6-204ENST00000557829 ZGPATQ8N5A5 531 aaKnown RBP16.06■□□□□ 0.16
CPNE6-204ENST00000557829 PDLIM2Q96JY6 352 aa16.06■□□□□ 0.16
CPNE6-204ENST00000557829 ESYT1Q9BSJ8 1104 aa16.06■□□□□ 0.16
CPNE6-204ENST00000557829 STK31Q9BXU1 1019 aa16.06■□□□□ 0.16
CPNE6-204ENST00000557829 LRRCC1Q9C099 1032 aa16.06■□□□□ 0.16
CPNE6-204ENST00000557829 MBD3O95983 291 aa16.05■□□□□ 0.16
CPNE6-204ENST00000557829 TERF1P54274 439 aa16.05■□□□□ 0.16
CPNE6-204ENST00000557829 PKP1Q13835 747 aa16.05■□□□□ 0.16
CPNE6-204ENST00000557829 HSP90AA2PQ14568 343 aaPredicted RBP16.05■□□□□ 0.16
CPNE6-204ENST00000557829 G2E3Q7L622 706 aa16.05■□□□□ 0.16
CPNE6-204ENST00000557829 COL14A1Q05707 1796 aaKnown RBP16.05■□□□□ 0.16
CPNE6-204ENST00000557829 CEMIPQ8WUJ3 1361 aa16.05■□□□□ 0.16
CPNE6-204ENST00000557829 APBB1O00213 710 aa16.04■□□□□ 0.16
CPNE6-204ENST00000557829 PRPF40AO75400 957 aaKnown RBP16.04■□□□□ 0.16
CPNE6-204ENST00000557829 CCDC30Q5VVM6 783 aa16.04■□□□□ 0.16
CPNE6-204ENST00000557829 NCLP19338 710 aaKnown RBP16.04■□□□□ 0.16
CPNE6-204ENST00000557829 C1orf141Q5JVX7 400 aa16.04■□□□□ 0.16
CPNE6-204ENST00000557829 TMX3Q96JJ7 454 aa16.04■□□□□ 0.16
CPNE6-204ENST00000557829 MX1P20591 662 aa16.03■□□□□ 0.16
CPNE6-204ENST00000557829 SLC4A10Q6U841 1118 aa16.03■□□□□ 0.16
CPNE6-204ENST00000557829 GPT2Q8TD30 523 aa16.03■□□□□ 0.16
CPNE6-204ENST00000557829 AFF2P51816 1311 aa16.03■□□□□ 0.16
CPNE6-204ENST00000557829 SIPA1L3O60292 1781 aaPredicted RBP16.03■□□□□ 0.16
CPNE6-204ENST00000557829 OFD1O75665 1012 aa16.03■□□□□ 0.16
CPNE6-204ENST00000557829 BRD1O95696 1058 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms