RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 DDX54Q8TDD1 881 aaKnown RBP12.04□□□□□ -0.48
CHD8-214ENST00000557727 UPF1Q92900 1129 aaKnown RBP eCLIP12.04□□□□□ -0.486e-10■■■■■ 33.3
CHD8-214ENST00000557727 ADAMTS8Q9UP79 889 aa12.04□□□□□ -0.48
CHD8-214ENST00000557727 POTEB3A0JP26 581 aa12.03□□□□□ -0.48
CHD8-214ENST00000557727 DOK7Q18PE1 504 aa12.03□□□□□ -0.48
CHD8-214ENST00000557727 AMOTQ4VCS5 1084 aa12.03□□□□□ -0.48
CHD8-214ENST00000557727 PLEKHO1Q53GL0 409 aaPredicted RBP12.03□□□□□ -0.48
CHD8-214ENST00000557727 POTEBQ6S5H4 581 aa12.03□□□□□ -0.48
CHD8-214ENST00000557727 MICALL2Q8IY33 904 aa12.03□□□□□ -0.48
CHD8-214ENST00000557727 SPG7Q9UQ90 795 aa12.03□□□□□ -0.48
CHD8-214ENST00000557727 KCNQ2O43526 872 aa12.02□□□□□ -0.49
CHD8-214ENST00000557727 HOXB1P14653 301 aaPredicted RBP12.02□□□□□ -0.49
CHD8-214ENST00000557727 UBR2Q8IWV8 1755 aa12.02□□□□□ -0.49
CHD8-214ENST00000557727 NUP188Q5SRE5 1749 aa12.01□□□□□ -0.49
CHD8-214ENST00000557727 ZNF530Q6P9A1 599 aaPredicted RBP12.01□□□□□ -0.49
CHD8-214ENST00000557727 IFNL2Q8IZJ0 200 aa12.01□□□□□ -0.49
CHD8-214ENST00000557727 ZNF710Q8N1W2 664 aa12.01□□□□□ -0.49
CHD8-214ENST00000557727 MRS2Q9HD23 443 aa12.01□□□□□ -0.49
CHD8-214ENST00000557727 TAF1LQ8IZX4 1826 aa12□□□□□ -0.49
CHD8-214ENST00000557727 SOCS7O14512 581 aa12□□□□□ -0.49
CHD8-214ENST00000557727 TRIM37O94972 964 aa12□□□□□ -0.49
CHD8-214ENST00000557727 AKAP4Q5JQC9 854 aa12□□□□□ -0.49
CHD8-214ENST00000557727 MS4A4AQ96JQ5 239 aa12□□□□□ -0.49
CHD8-214ENST00000557727 TAOK2Q9UL54 1235 aa12□□□□□ -0.49
CHD8-214ENST00000557727 CEMIPQ8WUJ3 1361 aa12□□□□□ -0.49
CHD8-214ENST00000557727 MAP3K5Q99683 1374 aa12□□□□□ -0.49
CHD8-214ENST00000557727 CCER2I3L3R5 266 aa11.99□□□□□ -0.49
CHD8-214ENST00000557727 ACSBG1Q96GR2 724 aa11.99□□□□□ -0.49
CHD8-214ENST00000557727 KRTAP3-3Q9BYR6 98 aa11.99□□□□□ -0.49
CHD8-214ENST00000557727 KRTAP3-2Q9BYR7 98 aa11.99□□□□□ -0.49
CHD8-214ENST00000557727 BCL11BQ9C0K0 894 aaPredicted RBP11.99□□□□□ -0.49
CHD8-214ENST00000557727 CICQ96RK0 1608 aaPredicted RBP11.99□□□□□ -0.49
CHD8-214ENST00000557727 ZNF831Q5JPB2 1677 aa11.99□□□□□ -0.49
CHD8-214ENST00000557727 KDM3BQ7LBC6 1761 aa11.99□□□□□ -0.49
CHD8-214ENST00000557727 PRIM1P49642 420 aaKnown RBP11.98□□□□□ -0.49
CHD8-214ENST00000557727 WDR43Q15061 677 aaKnown RBP eCLIP11.98□□□□□ -0.49
CHD8-214ENST00000557727 MPRIPQ6WCQ1 1025 aa11.98□□□□□ -0.49
CHD8-214ENST00000557727 CCDC146Q8IYE0 955 aa11.98□□□□□ -0.49
CHD8-214ENST00000557727 IL17REQ8NFR9 667 aa11.98□□□□□ -0.49
CHD8-214ENST00000557727 DCAF5Q96JK2 942 aa11.98□□□□□ -0.49
CHD8-214ENST00000557727 LGR6Q9HBX8 967 aa11.98□□□□□ -0.49
CHD8-214ENST00000557727 RIMBP2O15034 1052 aa11.97□□□□□ -0.49
CHD8-214ENST00000557727 GAS2L2Q8NHY3 880 aa11.97□□□□□ -0.49
CHD8-214ENST00000557727 RUNDC1Q96C34 613 aa11.97□□□□□ -0.49
CHD8-214ENST00000557727 TJP1Q07157 1748 aa11.97□□□□□ -0.49
CHD8-214ENST00000557727 RNMTO43148 476 aaKnown RBP11.96□□□□□ -0.49
CHD8-214ENST00000557727 NFE2L2Q16236 605 aa11.96□□□□□ -0.49
CHD8-214ENST00000557727 C1orf141Q5JVX7 400 aa11.96□□□□□ -0.49
CHD8-214ENST00000557727 TMEM92Q6UXU6 159 aa11.96□□□□□ -0.49
CHD8-214ENST00000557727 CCDC125Q86Z20 511 aa11.96□□□□□ -0.49
CHD8-214ENST00000557727 PIGBQ92521 554 aa11.96□□□□□ -0.49
CHD8-214ENST00000557727 COL5A3P25940 1745 aaPredicted RBP11.96□□□□□ -0.49
CHD8-214ENST00000557727 TUBGCP6Q96RT7 1819 aa11.95□□□□□ -0.5
CHD8-214ENST00000557727 C5P01031 1676 aa11.95□□□□□ -0.5
CHD8-214ENST00000557727 GNAT3A8MTJ3 354 aa11.95□□□□□ -0.5
CHD8-214ENST00000557727 ERVV-2B6SEH9 535 aa11.95□□□□□ -0.5
CHD8-214ENST00000557727 HSP90AB1P08238 724 aaKnown RBP11.95□□□□□ -0.5
CHD8-214ENST00000557727 TMPOP42166 694 aaKnown RBP11.95□□□□□ -0.5
CHD8-214ENST00000557727 DEFB132Q7Z7B7 95 aa11.95□□□□□ -0.5
CHD8-214ENST00000557727 CAMKK2Q96RR4 588 aa11.95□□□□□ -0.5
CHD8-214ENST00000557727 KCPQ6ZWJ8 1503 aa11.95□□□□□ -0.5
CHD8-214ENST00000557727 PLSCR1O15162 318 aa11.94□□□□□ -0.5
CHD8-214ENST00000557727 ZSWIM6Q9HCJ5 1215 aa11.94□□□□□ -0.5
CHD8-214ENST00000557727 MAPK8IP3Q9UPT6 1336 aa11.93□□□□□ -0.5
CHD8-214ENST00000557727 MYH14Q7Z406 1995 aaKnown RBP11.93□□□□□ -0.5
CHD8-214ENST00000557727 APAF1O14727 1248 aa11.93□□□□□ -0.5
CHD8-214ENST00000557727 HTATSF1O43719 755 aaKnown RBP11.93□□□□□ -0.5
CHD8-214ENST00000557727 DCTN1Q14203 1278 aa11.93□□□□□ -0.5
CHD8-214ENST00000557727 MCM10Q7L590 875 aa11.93□□□□□ -0.5
CHD8-214ENST00000557727 PNNQ9H307 717 aaKnown RBP11.93□□□□□ -0.5
CHD8-214ENST00000557727 SLC52A2Q9HAB3 445 aa11.93□□□□□ -0.5
CHD8-214ENST00000557727 RRP7AQ9Y3A4 280 aaKnown RBP11.93□□□□□ -0.5
CHD8-214ENST00000557727 APBA3O96018 575 aa11.92□□□□□ -0.5
CHD8-214ENST00000557727 EN1Q05925 392 aaPredicted RBP11.92□□□□□ -0.5
CHD8-214ENST00000557727 NFATC2IPQ8NCF5 419 aa11.92□□□□□ -0.5
CHD8-214ENST00000557727 THUMPD2Q9BTF0 503 aaKnown RBP11.92□□□□□ -0.5
CHD8-214ENST00000557727 ATG3Q9NT62 314 aa11.92□□□□□ -0.5
CHD8-214ENST00000557727 ASAP1Q9ULH1 1129 aa11.92□□□□□ -0.5
CHD8-214ENST00000557727 QSER1Q2KHR3 1735 aa11.91□□□□□ -0.5
CHD8-214ENST00000557727 RIPK4P57078 832 aa11.91□□□□□ -0.5
CHD8-214ENST00000557727 EZH2Q15910 746 aaKnown RBP11.91□□□□□ -0.5
CHD8-214ENST00000557727 FAM9BQ8IZU0 186 aa11.91□□□□□ -0.5
CHD8-214ENST00000557727 SYTL4Q96C24 671 aaPredicted RBP11.91□□□□□ -0.5
CHD8-214ENST00000557727 TMOD3Q9NYL9 352 aa11.91□□□□□ -0.5
CHD8-214ENST00000557727 UBR3Q6ZT12 1888 aa11.91□□□□□ -0.5
CHD8-214ENST00000557727 PALLDQ8WX93 1383 aa11.91□□□□□ -0.5
CHD8-214ENST00000557727 FBXO22Q8NEZ5 403 aa11.9□□□□□ -0.5
CHD8-214ENST00000557727 SLC4A9Q96Q91 983 aa11.9□□□□□ -0.5
CHD8-214ENST00000557727 LRRC4BQ9NT99 713 aa11.9□□□□□ -0.5
CHD8-214ENST00000557727 LAMB4A4D0S4 1761 aa11.9□□□□□ -0.51
CHD8-214ENST00000557727 C4BP0C0L5 1744 aa11.89□□□□□ -0.51
CHD8-214ENST00000557727 SENP3-EIF4A1A0A087X0R7 540 aa11.89□□□□□ -0.51
CHD8-214ENST00000557727 BAG6P46379 1132 aa11.89□□□□□ -0.51
CHD8-214ENST00000557727 CABP4P57796 275 aa11.89□□□□□ -0.51
CHD8-214ENST00000557727 SLC39A6Q13433 755 aa11.88□□□□□ -0.51
CHD8-214ENST00000557727 TXNRD1Q16881 649 aa11.88□□□□□ -0.51
CHD8-214ENST00000557727 ZNF521Q96K83 1311 aa11.87□□□□□ -0.51
CHD8-214ENST00000557727 KCNQ3O43525 872 aa11.87□□□□□ -0.51
CHD8-214ENST00000557727 NEFMP07197 916 aa11.87□□□□□ -0.51
CHD8-214ENST00000557727 KCNQ4P56696 695 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms