RNA–Protein interactions for RNA: ENST00000557662.1

RIPK3-207, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-207ENST00000557662 RSPH6AQ9H0K4 717 aa30.93■■■□□ 2.54
RIPK3-207ENST00000557662 SENP3-EIF4A1A0A087X0R7 540 aa30.92■■■□□ 2.54
RIPK3-207ENST00000557662 GNAT3A8MTJ3 354 aa30.92■■■□□ 2.54
RIPK3-207ENST00000557662 NARFQ9UHQ1 456 aa30.92■■■□□ 2.54
RIPK3-207ENST00000557662 CEP350Q5VT06 3117 aa30.92■■■□□ 2.54
RIPK3-207ENST00000557662 USPL1Q5W0Q7 1092 aa30.91■■■□□ 2.54
RIPK3-207ENST00000557662 BCL2L12Q9HB09 334 aa30.91■■■□□ 2.54
RIPK3-207ENST00000557662 BCS1LQ9Y276 419 aa30.91■■■□□ 2.54
RIPK3-207ENST00000557662 CNGB1Q14028 1251 aaPredicted RBP30.9■■■□□ 2.54
RIPK3-207ENST00000557662 PHACTR3Q96KR7 559 aa30.9■■■□□ 2.54
RIPK3-207ENST00000557662 GPBP1L1Q9HC44 474 aaPredicted RBP30.9■■■□□ 2.54
RIPK3-207ENST00000557662 HEG1Q9ULI3 1381 aa30.89■■■□□ 2.54
RIPK3-207ENST00000557662 ANKRD31Q8N7Z5 1873 aa30.89■■■□□ 2.53
RIPK3-207ENST00000557662 BCORQ6W2J9 1755 aa30.88■■■□□ 2.53
RIPK3-207ENST00000557662 ZNF790Q6PG37 636 aa30.88■■■□□ 2.53
RIPK3-207ENST00000557662 ZNF496Q96IT1 587 aaPredicted RBP30.88■■■□□ 2.53
RIPK3-207ENST00000557662 ZPR1O75312 459 aa30.87■■■□□ 2.53
RIPK3-207ENST00000557662 PPP2R1AP30153 589 aa30.87■■■□□ 2.53
RIPK3-207ENST00000557662 DLG5Q8TDM6 1919 aa30.86■■■□□ 2.53
RIPK3-207ENST00000557662 PRKAR2BP31323 418 aa30.86■■■□□ 2.53
RIPK3-207ENST00000557662 EIF5P55010 431 aaKnown RBP30.86■■■□□ 2.53
RIPK3-207ENST00000557662 NFIXQ14938 502 aa30.86■■■□□ 2.53
RIPK3-207ENST00000557662 TEFQ10587 303 aa30.85■■■□□ 2.53
RIPK3-207ENST00000557662 CFAP53Q96M91 514 aa30.85■■■□□ 2.53
RIPK3-207ENST00000557662 FCHSD2O94868 740 aa30.84■■■□□ 2.53
RIPK3-207ENST00000557662 TTC5Q8N0Z6 440 aa30.84■■■□□ 2.53
RIPK3-207ENST00000557662 PIM2Q9P1W9 311 aa30.83■■■□□ 2.53
RIPK3-207ENST00000557662 KIF3CO14782 793 aa30.81■■■□□ 2.52
RIPK3-207ENST00000557662 STARD3NLO95772 234 aa30.81■■■□□ 2.52
RIPK3-207ENST00000557662 ZNF526Q8TF50 670 aaPredicted RBP30.81■■■□□ 2.52
RIPK3-207ENST00000557662 CHRNA5P30532 468 aa30.8■■■□□ 2.52
RIPK3-207ENST00000557662 CANXP27824 592 aaKnown RBP30.79■■■□□ 2.52
RIPK3-207ENST00000557662 TEX13AQ9BXU3 409 aaPredicted RBP30.79■■■□□ 2.52
RIPK3-207ENST00000557662 COL11A2P13942 1736 aaPredicted RBP30.78■■■□□ 2.52
RIPK3-207ENST00000557662 CCDC88AQ3V6T2 1871 aa30.78■■■□□ 2.52
RIPK3-207ENST00000557662 ARHGAP27Q6ZUM4 889 aa30.78■■■□□ 2.52
RIPK3-207ENST00000557662 DALRD3Q5D0E6 543 aaKnown RBP30.77■■■□□ 2.52
RIPK3-207ENST00000557662 NUDCQ9Y266 331 aa30.77■■■□□ 2.52
RIPK3-207ENST00000557662 CARMIL3Q8ND23 1372 aa30.77■■■□□ 2.52
RIPK3-207ENST00000557662 KCNQ3O43525 872 aa30.76■■■□□ 2.51
RIPK3-207ENST00000557662 FMNL2Q96PY5 1086 aa30.76■■■□□ 2.51
RIPK3-207ENST00000557662 LAMB4A4D0S4 1761 aa30.75■■■□□ 2.51
RIPK3-207ENST00000557662 SERPINB2P05120 415 aa30.75■■■□□ 2.51
RIPK3-207ENST00000557662 KDM3BQ7LBC6 1761 aa30.74■■■□□ 2.51
RIPK3-207ENST00000557662 A0A087WZG4 1122 aa30.74■■■□□ 2.51
RIPK3-207ENST00000557662 U2AF1L5P0DN76 240 aaPredicted RBP30.74■■■□□ 2.51
RIPK3-207ENST00000557662 IL6STP40189 918 aaPredicted RBP30.74■■■□□ 2.51
RIPK3-207ENST00000557662 U2AF1Q01081 240 aaKnown RBP eCLIP30.74■■■□□ 2.51
RIPK3-207ENST00000557662 ARFGEF2Q9Y6D5 1785 aa30.72■■■□□ 2.51
RIPK3-207ENST00000557662 BTBD11A6QL63 1104 aa30.72■■■□□ 2.51
RIPK3-207ENST00000557662 TNRC6CQ9HCJ0 1690 aaKnown RBP30.71■■■□□ 2.51
RIPK3-207ENST00000557662 FER1L6Q2WGJ9 1857 aa30.7■■■□□ 2.51
RIPK3-207ENST00000557662 A1BGP04217 495 aa30.7■■■□□ 2.51
RIPK3-207ENST00000557662 C9orf131Q5VYM1 1079 aa30.7■■■□□ 2.51
RIPK3-207ENST00000557662 HTATSF1O43719 755 aaKnown RBP30.69■■■□□ 2.5
RIPK3-207ENST00000557662 TBC1D9BQ66K14 1250 aa30.69■■■□□ 2.5
RIPK3-207ENST00000557662 DICER1Q9UPY3 1922 aaKnown RBP30.69■■■□□ 2.5
RIPK3-207ENST00000557662 TIAM2Q8IVF5 1701 aa30.68■■■□□ 2.5
RIPK3-207ENST00000557662 HSPA6P17066 643 aa30.68■■■□□ 2.5
RIPK3-207ENST00000557662 MCM10Q7L590 875 aa30.68■■■□□ 2.5
RIPK3-207ENST00000557662 CACNA1SQ13698 1873 aa30.67■■■□□ 2.5
RIPK3-207ENST00000557662 CAMTA2O94983 1202 aa30.67■■■□□ 2.5
RIPK3-207ENST00000557662 TBC1D2BQ9UPU7 963 aa30.66■■■□□ 2.5
RIPK3-207ENST00000557662 USP16Q9Y5T5 823 aa30.66■■■□□ 2.5
RIPK3-207ENST00000557662 PRAMEF22A3QJZ6 481 aa30.64■■■□□ 2.5
RIPK3-207ENST00000557662 NMRK2Q9NPI5 230 aa30.64■■■□□ 2.5
RIPK3-207ENST00000557662 DCTN1Q14203 1278 aa30.63■■■□□ 2.49
RIPK3-207ENST00000557662 RTF1Q92541 710 aaKnown RBP30.63■■■□□ 2.49
RIPK3-207ENST00000557662 PRELPP51888 382 aa30.62■■■□□ 2.49
RIPK3-207ENST00000557662 PRR5LQ6MZQ0 368 aa30.62■■■□□ 2.49
RIPK3-207ENST00000557662 BICDL1Q6ZP65 573 aa30.62■■■□□ 2.49
RIPK3-207ENST00000557662 PLEKHF1Q96S99 279 aa30.62■■■□□ 2.49
RIPK3-207ENST00000557662 C2CD5Q86YS7 1000 aa30.61■■■□□ 2.49
RIPK3-207ENST00000557662 RNF181Q9P0P0 153 aa30.61■■■□□ 2.49
RIPK3-207ENST00000557662 SLX4Q8IY92 1834 aa30.61■■■□□ 2.49
RIPK3-207ENST00000557662 TOMM70O94826 608 aa30.6■■■□□ 2.49
RIPK3-207ENST00000557662 SNRPA1P09661 255 aaKnown RBP30.6■■■□□ 2.49
RIPK3-207ENST00000557662 TTLL6Q8N841 843 aa30.6■■■□□ 2.49
RIPK3-207ENST00000557662 BRIP1Q9BX63 1249 aa30.6■■■□□ 2.49
RIPK3-207ENST00000557662 ZC3H4Q9UPT8 1303 aaKnown RBP30.59■■■□□ 2.49
RIPK3-207ENST00000557662 H0YIN7 160 aa30.58■■■□□ 2.49
RIPK3-207ENST00000557662 RASSF7Q02833 373 aa30.58■■■□□ 2.49
RIPK3-207ENST00000557662 DZIP3Q86Y13 1208 aaKnown RBP30.58■■■□□ 2.49
RIPK3-207ENST00000557662 PDZRN3Q9UPQ7 1066 aa30.58■■■□□ 2.49
RIPK3-207ENST00000557662 ZNF330Q9Y3S2 320 aaPredicted RBP30.58■■■□□ 2.49
RIPK3-207ENST00000557662 NUP98P52948 1817 aa30.57■■■□□ 2.48
RIPK3-207ENST00000557662 NBPF26B4DH59 902 aa30.57■■■□□ 2.48
RIPK3-207ENST00000557662 PIP4K2AP48426 406 aaPredicted RBP30.57■■■□□ 2.48
RIPK3-207ENST00000557662 NBPF10Q6P3W6 841 aaKnown RBP30.57■■■□□ 2.48
RIPK3-207ENST00000557662 NBPF15Q8N660 670 aa30.57■■■□□ 2.48
RIPK3-207ENST00000557662 WDR90Q96KV7 1748 aa30.56■■■□□ 2.48
RIPK3-207ENST00000557662 RGL2O15211 777 aa30.56■■■□□ 2.48
RIPK3-207ENST00000557662 TAF7Q15545 349 aaPredicted RBP30.56■■■□□ 2.48
RIPK3-207ENST00000557662 NFKBIEO00221 500 aa30.55■■■□□ 2.48
RIPK3-207ENST00000557662 CLEC4GQ6UXB4 293 aa30.55■■■□□ 2.48
RIPK3-207ENST00000557662 PDE6BP35913 854 aa30.54■■■□□ 2.48
RIPK3-207ENST00000557662 SETDB2Q96T68 719 aa30.54■■■□□ 2.48
RIPK3-207ENST00000557662 LMNB1P20700 586 aa30.53■■■□□ 2.48
RIPK3-207ENST00000557662 KDM2BQ8NHM5 1336 aa30.52■■■□□ 2.48
RIPK3-207ENST00000557662 RBM46Q8TBY0 533 aaKnown RBP30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms