RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-227	ENST00000557599	C1orf141	Q5JVX7	400 aa		13.7	□□□□□ -0.22
PRKCH-227	ENST00000557599	KLHL34	Q8N239	644 aa		13.7	□□□□□ -0.22
PRKCH-227	ENST00000557599	PHACTR3	Q96KR7	559 aa		13.7	□□□□□ -0.22
PRKCH-227	ENST00000557599	NRXN2	Q9P2S2	1712 aa		13.7	□□□□□ -0.22
PRKCH-227	ENST00000557599	IL16	Q14005	1332 aa		13.69	□□□□□ -0.22
PRKCH-227	ENST00000557599	GNPAT	O15228	680 aa		13.69	□□□□□ -0.22
PRKCH-227	ENST00000557599	HTATSF1	O43719	755 aa	Known RBP	13.69	□□□□□ -0.22
PRKCH-227	ENST00000557599	PHF14	O94880	888 aa		13.69	□□□□□ -0.22
PRKCH-227	ENST00000557599	ADRA2B	P18089	450 aa		13.69	□□□□□ -0.22
PRKCH-227	ENST00000557599	ATP10D	Q9P241	1426 aa		13.68	□□□□□ -0.22
PRKCH-227	ENST00000557599	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.68	□□□□□ -0.22
PRKCH-227	ENST00000557599	ZNF521	Q96K83	1311 aa		13.67	□□□□□ -0.22
PRKCH-227	ENST00000557599	GNAT3	A8MTJ3	354 aa		13.67	□□□□□ -0.22
PRKCH-227	ENST00000557599	MTHFSD	Q2M296	383 aa	Known RBP	13.67	□□□□□ -0.22
PRKCH-227	ENST00000557599	DLEC1	Q9Y238	1755 aa		13.67	□□□□□ -0.22
PRKCH-227	ENST00000557599	GYS1	P13807	737 aa		13.66	□□□□□ -0.22
PRKCH-227	ENST00000557599	DLG5	Q8TDM6	1919 aa		13.66	□□□□□ -0.22
PRKCH-227	ENST00000557599	RPS6KA4	O75676	772 aa		13.65	□□□□□ -0.22
PRKCH-227	ENST00000557599	GNAI1	P63096	354 aa		13.65	□□□□□ -0.22
PRKCH-227	ENST00000557599	SLFN5	Q08AF3	891 aa		13.65	□□□□□ -0.22
PRKCH-227	ENST00000557599	AKAP4	Q5JQC9	854 aa		13.65	□□□□□ -0.22
PRKCH-227	ENST00000557599	ARHGEF1	Q92888	912 aa	Known RBP	13.65	□□□□□ -0.22
PRKCH-227	ENST00000557599	TRIM35	Q9UPQ4	493 aa		13.65	□□□□□ -0.22
PRKCH-227	ENST00000557599	NEFL	P07196	543 aa		13.64	□□□□□ -0.23
PRKCH-227	ENST00000557599	MMP10	P09238	476 aa		13.64	□□□□□ -0.23
PRKCH-227	ENST00000557599	PELP1	Q8IZL8	1130 aa	Known RBP	13.64	□□□□□ -0.23
PRKCH-227	ENST00000557599	RTCB	Q9Y3I0	505 aa	Known RBP	13.64	□□□□□ -0.23
PRKCH-227	ENST00000557599	AFDN	P55196	1824 aa	Known RBP	13.64	□□□□□ -0.23
PRKCH-227	ENST00000557599	SCN7A	Q01118	1682 aa		13.63	□□□□□ -0.23
PRKCH-227	ENST00000557599	GIGYF1	O75420	1035 aa	Predicted RBP	13.63	□□□□□ -0.23
PRKCH-227	ENST00000557599	CABP4	P57796	275 aa		13.63	□□□□□ -0.23
PRKCH-227	ENST00000557599	TRAPPC3L	Q5T215	181 aa		13.63	□□□□□ -0.23
PRKCH-227	ENST00000557599	NLGN1	Q8N2Q7	840 aa		13.63	□□□□□ -0.23
PRKCH-227	ENST00000557599	NFATC2IP	Q8NCF5	419 aa		13.63	□□□□□ -0.23
PRKCH-227	ENST00000557599	CDCA7L	Q96GN5	454 aa		13.63	□□□□□ -0.23
PRKCH-227	ENST00000557599	IFT57	Q9NWB7	429 aa		13.63	□□□□□ -0.23
PRKCH-227	ENST00000557599	LAS1L	Q9Y4W2	734 aa	Known RBP	13.63	□□□□□ -0.23
PRKCH-227	ENST00000557599	USP42	Q9H9J4	1324 aa	Known RBP	13.63	□□□□□ -0.23
PRKCH-227	ENST00000557599	TGFB2	P61812	414 aa		13.62	□□□□□ -0.23
PRKCH-227	ENST00000557599	CRKL	P46109	303 aa	Known RBP	13.61	□□□□□ -0.23
PRKCH-227	ENST00000557599	TEF	Q10587	303 aa		13.61	□□□□□ -0.23
PRKCH-227	ENST00000557599	INTS5	Q6P9B9	1019 aa	Known RBP	13.61	□□□□□ -0.23
PRKCH-227	ENST00000557599	RBM42	Q9BTD8	480 aa	Known RBP	13.61	□□□□□ -0.23
PRKCH-227	ENST00000557599	SLC52A2	Q9HAB3	445 aa		13.61	□□□□□ -0.23
PRKCH-227	ENST00000557599	KCNA3	P22001	575 aa		13.6	□□□□□ -0.23
PRKCH-227	ENST00000557599	DUSP27	Q5VZP5	1158 aa		13.6	□□□□□ -0.23
PRKCH-227	ENST00000557599	MCM10	Q7L590	875 aa		13.6	□□□□□ -0.23
PRKCH-227	ENST00000557599	CFAP44	Q96MT7	982 aa		13.6	□□□□□ -0.23
PRKCH-227	ENST00000557599	CT47B1	P0C2W7	299 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKCH-227	ENST00000557599	LGR6	Q9HBX8	967 aa		13.59	□□□□□ -0.23
PRKCH-227	ENST00000557599	RCAN3	Q9UKA8	241 aa		13.59	□□□□□ -0.23
PRKCH-227	ENST00000557599	SOS1	Q07889	1333 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKCH-227	ENST00000557599	BCOR	Q6W2J9	1755 aa		13.58	□□□□□ -0.23
PRKCH-227	ENST00000557599	RNMT	O43148	476 aa	Known RBP	13.58	□□□□□ -0.24
PRKCH-227	ENST00000557599	PTCD1	O75127	700 aa	Known RBP	13.58	□□□□□ -0.24
PRKCH-227	ENST00000557599	DDR1	Q08345	913 aa		13.58	□□□□□ -0.24
PRKCH-227	ENST00000557599	DCTN1	Q14203	1278 aa		13.58	□□□□□ -0.24
PRKCH-227	ENST00000557599	TRMT2A	Q8IZ69	625 aa	Known RBP	13.58	□□□□□ -0.24
PRKCH-227	ENST00000557599	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.58	□□□□□ -0.24
PRKCH-227	ENST00000557599	THUMPD2	Q9BTF0	503 aa	Known RBP	13.58	□□□□□ -0.24
PRKCH-227	ENST00000557599	BABAM1	Q9NWV8	329 aa		13.58	□□□□□ -0.24
PRKCH-227	ENST00000557599	SBF1	O95248	1867 aa		13.58	□□□□□ -0.24
PRKCH-227	ENST00000557599	FANCI	Q9NVI1	1328 aa		13.58	□□□□□ -0.24
PRKCH-227	ENST00000557599	CEMIP	Q8WUJ3	1361 aa		13.58	□□□□□ -0.24
PRKCH-227	ENST00000557599	CYP19A1	P11511	503 aa	Predicted RBP	13.57	□□□□□ -0.24
PRKCH-227	ENST00000557599	TM4SF1	P30408	202 aa		13.57	□□□□□ -0.24
PRKCH-227	ENST00000557599	RFC4	P35249	363 aa		13.57	□□□□□ -0.24
PRKCH-227	ENST00000557599	FKBP8	Q14318	412 aa		13.57	□□□□□ -0.24
PRKCH-227	ENST00000557599	VSIG10	Q8N0Z9	540 aa		13.57	□□□□□ -0.24
PRKCH-227	ENST00000557599	TSPYL4	Q9UJ04	414 aa		13.57	□□□□□ -0.24
PRKCH-227	ENST00000557599	ANKRD31	Q8N7Z5	1873 aa		13.57	□□□□□ -0.24
PRKCH-227	ENST00000557599	TAF7	Q15545	349 aa	Predicted RBP	13.56	□□□□□ -0.24
PRKCH-227	ENST00000557599	CHMP4A	Q9BY43	222 aa		13.56	□□□□□ -0.24
PRKCH-227	ENST00000557599	CCDC87	Q9NVE4	849 aa		13.56	□□□□□ -0.24
PRKCH-227	ENST00000557599	SRP68	Q9UHB9	627 aa	Known RBP	13.56	□□□□□ -0.24
PRKCH-227	ENST00000557599	COL15A1	P39059	1388 aa		13.56	□□□□□ -0.24
PRKCH-227	ENST00000557599	COL11A2	P13942	1736 aa	Predicted RBP	13.56	□□□□□ -0.24
PRKCH-227	ENST00000557599	POLRMT	O00411	1230 aa	Known RBP	13.55	□□□□□ -0.24
PRKCH-227	ENST00000557599	KIF3C	O14782	793 aa		13.55	□□□□□ -0.24
PRKCH-227	ENST00000557599	DNAJC10	Q8IXB1	793 aa		13.55	□□□□□ -0.24
PRKCH-227	ENST00000557599	TSR2	Q969E8	191 aa	Known RBP	13.55	□□□□□ -0.24
PRKCH-227	ENST00000557599	ZNF428	Q96B54	188 aa		13.55	□□□□□ -0.24
PRKCH-227	ENST00000557599	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.55	□□□□□ -0.24
PRKCH-227	ENST00000557599	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.54	□□□□□ -0.24
PRKCH-227	ENST00000557599		A0A0G2JLW4	131 aa		13.54	□□□□□ -0.24
PRKCH-227	ENST00000557599	CHL1	O00533	1208 aa		13.54	□□□□□ -0.24
PRKCH-227	ENST00000557599	ZNF853	P0CG23	659 aa		13.54	□□□□□ -0.24
PRKCH-227	ENST00000557599	DPEP1	P16444	411 aa		13.54	□□□□□ -0.24
PRKCH-227	ENST00000557599	IL17RE	Q8NFR9	667 aa		13.54	□□□□□ -0.24
PRKCH-227	ENST00000557599	BCL2L12	Q9HB09	334 aa		13.54	□□□□□ -0.24
PRKCH-227	ENST00000557599	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.54	□□□□□ -0.24
PRKCH-227	ENST00000557599	MBIP	Q9NS73	344 aa		13.54	□□□□□ -0.24
PRKCH-227	ENST00000557599	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.54	□□□□□ -0.24
PRKCH-227	ENST00000557599	ARFGEF2	Q9Y6D5	1785 aa		13.53	□□□□□ -0.24
PRKCH-227	ENST00000557599	EXOSC9	Q06265	439 aa	Known RBP	13.53	□□□□□ -0.24
PRKCH-227	ENST00000557599	SLC39A6	Q13433	755 aa		13.53	□□□□□ -0.24
PRKCH-227	ENST00000557599	ZBTB1	Q9Y2K1	713 aa		13.53	□□□□□ -0.24
PRKCH-227	ENST00000557599	PARP3	Q9Y6F1	533 aa		13.53	□□□□□ -0.24
PRKCH-227	ENST00000557599	BTBD11	A6QL63	1104 aa		13.52	□□□□□ -0.25
PRKCH-227	ENST00000557599	CANX	P27824	592 aa	Known RBP	13.52	□□□□□ -0.25

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