RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 SPDYE4A6NLX3 237 aa14.23□□□□□ -0.13
PSMC6-215ENST00000557517 U2SURPO15042 1029 aaKnown RBP14.23□□□□□ -0.13
PSMC6-215ENST00000557517 PPP2R1AP30153 589 aa14.23□□□□□ -0.13
PSMC6-215ENST00000557517 INTS5Q6P9B9 1019 aaKnown RBP14.23□□□□□ -0.13
PSMC6-215ENST00000557517 IL17REQ8NFR9 667 aa14.23□□□□□ -0.13
PSMC6-215ENST00000557517 COL3A1P02461 1466 aaPredicted RBP14.23□□□□□ -0.13
PSMC6-215ENST00000557517 GYS1P13807 737 aa14.22□□□□□ -0.13
PSMC6-215ENST00000557517 RFC4P35249 363 aa14.22□□□□□ -0.13
PSMC6-215ENST00000557517 CRKLP46109 303 aaKnown RBP14.22□□□□□ -0.13
PSMC6-215ENST00000557517 CFAP53Q96M91 514 aa14.22□□□□□ -0.13
PSMC6-215ENST00000557517 MMP10P09238 476 aa14.21□□□□□ -0.13
PSMC6-215ENST00000557517 SLC39A6Q13433 755 aa14.21□□□□□ -0.13
PSMC6-215ENST00000557517 VSIG10Q8N0Z9 540 aa14.21□□□□□ -0.13
PSMC6-215ENST00000557517 GAS2L2Q8NHY3 880 aa14.21□□□□□ -0.13
PSMC6-215ENST00000557517 PHACTR3Q96KR7 559 aa14.21□□□□□ -0.13
PSMC6-215ENST00000557517 CICQ96RK0 1608 aaPredicted RBP14.21□□□□□ -0.13
PSMC6-215ENST00000557517 GNAT3A8MTJ3 354 aa14.2□□□□□ -0.14
PSMC6-215ENST00000557517 FCHSD2O94868 740 aa14.2□□□□□ -0.14
PSMC6-215ENST00000557517 CYP19A1P11511 503 aaPredicted RBP14.2□□□□□ -0.14
PSMC6-215ENST00000557517 DNAJC10Q8IXB1 793 aa14.2□□□□□ -0.14
PSMC6-215ENST00000557517 RSPH6AQ9H0K4 717 aa14.2□□□□□ -0.14
PSMC6-215ENST00000557517 NUDCQ9Y266 331 aa14.2□□□□□ -0.14
PSMC6-215ENST00000557517 KIF3CO14782 793 aa14.19□□□□□ -0.14
PSMC6-215ENST00000557517 CLCN6P51797 869 aa14.19□□□□□ -0.14
PSMC6-215ENST00000557517 TGFB2P61812 414 aa14.19□□□□□ -0.14
PSMC6-215ENST00000557517 ZNF831Q5JPB2 1677 aa14.18□□□□□ -0.14
PSMC6-215ENST00000557517 ZNF526Q8TF50 670 aaPredicted RBP14.18□□□□□ -0.14
PSMC6-215ENST00000557517 CCDC87Q9NVE4 849 aa14.18□□□□□ -0.14
PSMC6-215ENST00000557517 UBR3Q6ZT12 1888 aa14.18□□□□□ -0.14
PSMC6-215ENST00000557517 PRKAR2BP31323 418 aa14.17□□□□□ -0.14
PSMC6-215ENST00000557517 ZNF790Q6PG37 636 aa14.17□□□□□ -0.14
PSMC6-215ENST00000557517 USP42Q9H9J4 1324 aaKnown RBP14.16□□□□□ -0.14
PSMC6-215ENST00000557517 U2AF1L5P0DN76 240 aaPredicted RBP14.16□□□□□ -0.14
PSMC6-215ENST00000557517 TM4SF1P30408 202 aa14.16□□□□□ -0.14
PSMC6-215ENST00000557517 U2AF1Q01081 240 aaKnown RBP eCLIP14.16□□□□□ -0.14
PSMC6-215ENST00000557517 TEFQ10587 303 aa14.16□□□□□ -0.14
PSMC6-215ENST00000557517 LHX8Q68G74 356 aa14.16□□□□□ -0.14
PSMC6-215ENST00000557517 CREBZFQ9NS37 354 aa14.16□□□□□ -0.14
PSMC6-215ENST00000557517 CEMIPQ8WUJ3 1361 aa14.16□□□□□ -0.14
PSMC6-215ENST00000557517 MRC1P22897 1456 aa14.16□□□□□ -0.14
PSMC6-215ENST00000557517 APLP1P51693 650 aa14.15□□□□□ -0.14
PSMC6-215ENST00000557517 FKBP8Q14318 412 aa14.15□□□□□ -0.14
PSMC6-215ENST00000557517 DNAJC5GQ8N7S2 189 aa14.15□□□□□ -0.14
PSMC6-215ENST00000557517 ZNF496Q96IT1 587 aaPredicted RBP14.15□□□□□ -0.14
PSMC6-215ENST00000557517 TEX13AQ9BXU3 409 aaPredicted RBP14.15□□□□□ -0.14
PSMC6-215ENST00000557517 SRP68Q9UHB9 627 aaKnown RBP14.15□□□□□ -0.14
PSMC6-215ENST00000557517 PARP3Q9Y6F1 533 aa14.15□□□□□ -0.14
PSMC6-215ENST00000557517 SOS1Q07889 1333 aaPredicted RBP14.15□□□□□ -0.15
PSMC6-215ENST00000557517 HTATSF1O43719 755 aaKnown RBP14.14□□□□□ -0.15
PSMC6-215ENST00000557517 STARD3NLO95772 234 aa14.14□□□□□ -0.15
PSMC6-215ENST00000557517 TTC5Q8N0Z6 440 aa14.14□□□□□ -0.15
PSMC6-215ENST00000557517 NARFQ9UHQ1 456 aa14.14□□□□□ -0.15
PSMC6-215ENST00000557517 WWC3Q9ULE0 1092 aa14.14□□□□□ -0.15
PSMC6-215ENST00000557517 KCNA3P22001 575 aa14.13□□□□□ -0.15
PSMC6-215ENST00000557517 EIF5P55010 431 aaKnown RBP14.13□□□□□ -0.15
PSMC6-215ENST00000557517 ZBTB1Q9Y2K1 713 aa14.13□□□□□ -0.15
PSMC6-215ENST00000557517 KIF13BQ9NQT8 1826 aa14.13□□□□□ -0.15
PSMC6-215ENST00000557517 KIAA1551Q9HCM1 1747 aa14.12□□□□□ -0.15
PSMC6-215ENST00000557517 ADAMTS7Q9UKP4 1686 aa14.12□□□□□ -0.15
PSMC6-215ENST00000557517 A0A0G2JLW4 131 aa14.12□□□□□ -0.15
PSMC6-215ENST00000557517 ZPR1O75312 459 aa14.12□□□□□ -0.15
PSMC6-215ENST00000557517 DDR1Q08345 913 aa14.12□□□□□ -0.15
PSMC6-215ENST00000557517 USPL1Q5W0Q7 1092 aa14.12□□□□□ -0.15
PSMC6-215ENST00000557517 BCL2L12Q9HB09 334 aa14.12□□□□□ -0.15
PSMC6-215ENST00000557517 HEG1Q9ULI3 1381 aa14.11□□□□□ -0.15
PSMC6-215ENST00000557517 KCPQ6ZWJ8 1503 aa14.11□□□□□ -0.15
PSMC6-215ENST00000557517 BTBD11A6QL63 1104 aa14.11□□□□□ -0.15
PSMC6-215ENST00000557517 POLRMTO00411 1230 aaKnown RBP14.11□□□□□ -0.15
PSMC6-215ENST00000557517 WDR90Q96KV7 1748 aa14.11□□□□□ -0.15
PSMC6-215ENST00000557517 FMNL2Q96PY5 1086 aa14.11□□□□□ -0.15
PSMC6-215ENST00000557517 KCNQ3O43525 872 aa14.1□□□□□ -0.15
PSMC6-215ENST00000557517 TOMM70O94826 608 aa14.1□□□□□ -0.15
PSMC6-215ENST00000557517 DPEP1P16444 411 aa14.1□□□□□ -0.15
PSMC6-215ENST00000557517 CANXP27824 592 aaKnown RBP14.1□□□□□ -0.15
PSMC6-215ENST00000557517 RTF1Q92541 710 aaKnown RBP14.1□□□□□ -0.15
PSMC6-215ENST00000557517 PLEKHF1Q96S99 279 aa14.1□□□□□ -0.15
PSMC6-215ENST00000557517 C10orf71Q711Q0 1435 aa14.09□□□□□ -0.15
PSMC6-215ENST00000557517 IL6STP40189 918 aaPredicted RBP14.09□□□□□ -0.15
PSMC6-215ENST00000557517 NFIXQ14938 502 aa14.09□□□□□ -0.15
PSMC6-215ENST00000557517 MCM10Q7L590 875 aa14.09□□□□□ -0.15
PSMC6-215ENST00000557517 PXDNLA1KZ92 1463 aa14.09□□□□□ -0.15
PSMC6-215ENST00000557517 COL5A3P25940 1745 aaPredicted RBP14.09□□□□□ -0.15
PSMC6-215ENST00000557517 SCN11AQ9UI33 1791 aa14.09□□□□□ -0.15
PSMC6-215ENST00000557517 A0A087WZG4 1122 aa14.08□□□□□ -0.16
PSMC6-215ENST00000557517 RALBP1Q15311 655 aa14.08□□□□□ -0.16
PSMC6-215ENST00000557517 ZNF579Q8NAF0 562 aaKnown RBP14.08□□□□□ -0.16
PSMC6-215ENST00000557517 USP16Q9Y5T5 823 aa14.08□□□□□ -0.16
PSMC6-215ENST00000557517 POTEIP0CG38 1075 aa14.07□□□□□ -0.16
PSMC6-215ENST00000557517 DCTN1Q14203 1278 aa14.07□□□□□ -0.16
PSMC6-215ENST00000557517 TAF7Q15545 349 aaPredicted RBP14.07□□□□□ -0.16
PSMC6-215ENST00000557517 PIM2Q9P1W9 311 aa14.07□□□□□ -0.16
PSMC6-215ENST00000557517 COL15A1P39059 1388 aa14.07□□□□□ -0.16
PSMC6-215ENST00000557517 BRCA1P38398 1863 aaKnown RBP14.06□□□□□ -0.16
PSMC6-215ENST00000557517 A1BGP04217 495 aa14.06□□□□□ -0.16
PSMC6-215ENST00000557517 SNRPA1P09661 255 aaKnown RBP14.06□□□□□ -0.16
PSMC6-215ENST00000557517 DCBLD2Q96PD2 775 aa14.06□□□□□ -0.16
PSMC6-215ENST00000557517 PNNQ9H307 717 aaKnown RBP14.06□□□□□ -0.16
PSMC6-215ENST00000557517 BCS1LQ9Y276 419 aa14.06□□□□□ -0.16
PSMC6-215ENST00000557517 N4BP2Q86UW6 1770 aaPredicted RBP14.06□□□□□ -0.16
PSMC6-215ENST00000557517 MYH14Q7Z406 1995 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms