RNA–Protein interactions for RNA: ENST00000557493.1

TGFB3-207, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-207ENST00000557493 TSPYL4Q9UJ04 414 aa13.66□□□□□ -0.22
TGFB3-207ENST00000557493 RNMTO43148 476 aaKnown RBP13.65□□□□□ -0.22
TGFB3-207ENST00000557493 RARSP54136 660 aaKnown RBP13.65□□□□□ -0.22
TGFB3-207ENST00000557493 MSL1Q68DK7 614 aa13.65□□□□□ -0.22
TGFB3-207ENST00000557493 COL23A1Q86Y22 540 aaPredicted RBP13.65□□□□□ -0.22
TGFB3-207ENST00000557493 ZCRB1Q8TBF4 217 aaKnown RBP13.65□□□□□ -0.22
TGFB3-207ENST00000557493 CCNL1Q9UK58 526 aaPredicted RBP13.65□□□□□ -0.22
TGFB3-207ENST00000557493 SOS1Q07889 1333 aaPredicted RBP13.64□□□□□ -0.23
TGFB3-207ENST00000557493 KDM6AO15550 1401 aaPredicted RBP13.64□□□□□ -0.23
TGFB3-207ENST00000557493 TAF7Q15545 349 aaPredicted RBP13.64□□□□□ -0.23
TGFB3-207ENST00000557493 DNAJC5GQ8N7S2 189 aa13.64□□□□□ -0.23
TGFB3-207ENST00000557493 DDX54Q8TDD1 881 aaKnown RBP13.64□□□□□ -0.23
TGFB3-207ENST00000557493 CAPN15O75808 1086 aa13.63□□□□□ -0.23
TGFB3-207ENST00000557493 CANXP27824 592 aaKnown RBP13.63□□□□□ -0.23
TGFB3-207ENST00000557493 TWISTNBQ3B726 338 aaPredicted RBP13.63□□□□□ -0.23
TGFB3-207ENST00000557493 ALDH1L2Q3SY69 923 aa13.63□□□□□ -0.23
TGFB3-207ENST00000557493 MPRIPQ6WCQ1 1025 aa13.63□□□□□ -0.23
TGFB3-207ENST00000557493 DCAF5Q96JK2 942 aa13.63□□□□□ -0.23
TGFB3-207ENST00000557493 KIF16BQ96L93 1317 aa13.63□□□□□ -0.23
TGFB3-207ENST00000557493 PRIM1P49642 420 aaKnown RBP13.62□□□□□ -0.23
TGFB3-207ENST00000557493 IRX6P78412 446 aaPredicted RBP13.62□□□□□ -0.23
TGFB3-207ENST00000557493 LGR6Q9HBX8 967 aa13.62□□□□□ -0.23
TGFB3-207ENST00000557493 SMC4Q9NTJ3 1288 aa13.62□□□□□ -0.23
TGFB3-207ENST00000557493 CYP27B1O15528 508 aa13.61□□□□□ -0.23
TGFB3-207ENST00000557493 BCAR3O75815 825 aa13.61□□□□□ -0.23
TGFB3-207ENST00000557493 TOMM70O94826 608 aa13.61□□□□□ -0.23
TGFB3-207ENST00000557493 TUBGCP6Q96RT7 1819 aa13.61□□□□□ -0.23
TGFB3-207ENST00000557493 VAMP4O75379 141 aa13.6□□□□□ -0.23
TGFB3-207ENST00000557493 HMGB2P26583 209 aaKnown RBP13.6□□□□□ -0.23
TGFB3-207ENST00000557493 COL13A1Q5TAT6 717 aaPredicted RBP13.6□□□□□ -0.23
TGFB3-207ENST00000557493 FLAD1Q8NFF5 587 aa13.6□□□□□ -0.23
TGFB3-207ENST00000557493 KAT6BQ8WYB5 2073 aa13.6□□□□□ -0.23
TGFB3-207ENST00000557493 BTBD11A6QL63 1104 aa13.59□□□□□ -0.23
TGFB3-207ENST00000557493 MS4A1P11836 297 aa13.59□□□□□ -0.23
TGFB3-207ENST00000557493 NKX1-1Q15270 411 aaPredicted RBP13.59□□□□□ -0.23
TGFB3-207ENST00000557493 C8orf58Q8NAV2 365 aa13.59□□□□□ -0.23
TGFB3-207ENST00000557493 SSH1Q8WYL5 1049 aa13.59□□□□□ -0.23
TGFB3-207ENST00000557493 CHMP4AQ9BY43 222 aa13.59□□□□□ -0.23
TGFB3-207ENST00000557493 SLC52A2Q9HAB3 445 aa13.59□□□□□ -0.23
TGFB3-207ENST00000557493 PLIN1O60240 522 aa13.58□□□□□ -0.24
TGFB3-207ENST00000557493 HOXB7P09629 217 aa13.58□□□□□ -0.24
TGFB3-207ENST00000557493 PRELPP51888 382 aa13.58□□□□□ -0.24
TGFB3-207ENST00000557493 BRPF1P55201 1214 aaPredicted RBP13.58□□□□□ -0.24
TGFB3-207ENST00000557493 TNS4Q8IZW8 715 aa13.58□□□□□ -0.24
TGFB3-207ENST00000557493 TSPYL6Q8N831 410 aa13.58□□□□□ -0.24
TGFB3-207ENST00000557493 BCL2L13Q9BXK5 485 aa13.58□□□□□ -0.24
TGFB3-207ENST00000557493 MIS18AQ9NYP9 233 aa13.58□□□□□ -0.24
TGFB3-207ENST00000557493 WWC3Q9ULE0 1092 aa13.58□□□□□ -0.24
TGFB3-207ENST00000557493 TOGARAM1Q9Y4F4 1720 aa13.58□□□□□ -0.24
TGFB3-207ENST00000557493 IPO8O15397 1037 aaKnown RBP13.57□□□□□ -0.24
TGFB3-207ENST00000557493 PDE3AQ14432 1141 aa13.57□□□□□ -0.24
TGFB3-207ENST00000557493 ZKSCAN2Q63HK3 967 aa13.57□□□□□ -0.24
TGFB3-207ENST00000557493 FRAT1Q92837 279 aaPredicted RBP13.57□□□□□ -0.24
TGFB3-207ENST00000557493 ERVV-2B6SEH9 535 aa13.56□□□□□ -0.24
TGFB3-207ENST00000557493 ELL2O00472 640 aaPredicted RBP13.56□□□□□ -0.24
TGFB3-207ENST00000557493 CABP4P57796 275 aa13.56□□□□□ -0.24
TGFB3-207ENST00000557493 KLRG1Q96E93 195 aa13.56□□□□□ -0.24
TGFB3-207ENST00000557493 LY75O60449 1722 aa13.56□□□□□ -0.24
TGFB3-207ENST00000557493 CACNA1FO60840 1977 aa13.55□□□□□ -0.24
TGFB3-207ENST00000557493 EIF4A1P60842 406 aaKnown RBP13.55□□□□□ -0.24
TGFB3-207ENST00000557493 KRT24Q2M2I5 525 aa13.55□□□□□ -0.24
TGFB3-207ENST00000557493 MRPL50Q8N5N7 158 aaKnown RBP13.55□□□□□ -0.24
TGFB3-207ENST00000557493 JMYQ8N9B5 988 aa13.55□□□□□ -0.24
TGFB3-207ENST00000557493 PPP4R2Q9NY27 417 aa13.55□□□□□ -0.24
TGFB3-207ENST00000557493 DOT1LQ8TEK3 1739 aa13.54□□□□□ -0.24
TGFB3-207ENST00000557493 LAMB4A4D0S4 1761 aa13.54□□□□□ -0.24
TGFB3-207ENST00000557493 UBR2Q8IWV8 1755 aa13.54□□□□□ -0.24
TGFB3-207ENST00000557493 FTSJ3Q8IY81 847 aaKnown RBP13.54□□□□□ -0.24
TGFB3-207ENST00000557493 STK31Q9BXU1 1019 aa13.54□□□□□ -0.24
TGFB3-207ENST00000557493 CCDC30Q5VVM6 783 aa13.53□□□□□ -0.24
TGFB3-207ENST00000557493 ZNF790Q6PG37 636 aa13.53□□□□□ -0.24
TGFB3-207ENST00000557493 ATF7IPQ6VMQ6 1270 aa13.53□□□□□ -0.24
TGFB3-207ENST00000557493 TTC5Q8N0Z6 440 aa13.53□□□□□ -0.24
TGFB3-207ENST00000557493 RBM46Q8TBY0 533 aaKnown RBP13.53□□□□□ -0.24
TGFB3-207ENST00000557493 ARHGAP45Q92619 1136 aa13.53□□□□□ -0.24
TGFB3-207ENST00000557493 CRBNQ96SW2 442 aa13.53□□□□□ -0.24
TGFB3-207ENST00000557493 HEG1Q9ULI3 1381 aa13.53□□□□□ -0.24
TGFB3-207ENST00000557493 C20orf194Q5TEA3 1177 aa13.52□□□□□ -0.25
TGFB3-207ENST00000557493 HDGFL1Q5TGJ6 251 aa13.52□□□□□ -0.25
TGFB3-207ENST00000557493 C16orf71Q8IYS4 520 aaPredicted RBP13.52□□□□□ -0.25
TGFB3-207ENST00000557493 NFATC2IPQ8NCF5 419 aa13.52□□□□□ -0.25
TGFB3-207ENST00000557493 EXOC6Q8TAG9 804 aa13.52□□□□□ -0.25
TGFB3-207ENST00000557493 AK7Q96M32 723 aa13.52□□□□□ -0.25
TGFB3-207ENST00000557493 API5Q9BZZ5 524 aaKnown RBP13.52□□□□□ -0.25
TGFB3-207ENST00000557493 NOB1Q9ULX3 412 aaKnown RBP13.52□□□□□ -0.25
TGFB3-207ENST00000557493 CICQ96RK0 1608 aaPredicted RBP13.52□□□□□ -0.25
TGFB3-207ENST00000557493 C5P01031 1676 aa13.52□□□□□ -0.25
TGFB3-207ENST00000557493 ITGB4P16144 1822 aa13.52□□□□□ -0.25
TGFB3-207ENST00000557493 PTPRCP08575 1304 aa13.51□□□□□ -0.25
TGFB3-207ENST00000557493 TRIM27P14373 513 aa13.51□□□□□ -0.25
TGFB3-207ENST00000557493 DZIP1LQ8IYY4 767 aaKnown RBP13.51□□□□□ -0.25
TGFB3-207ENST00000557493 NMRK2Q9NPI5 230 aa13.51□□□□□ -0.25
TGFB3-207ENST00000557493 TMOD3Q9NYL9 352 aa13.51□□□□□ -0.25
TGFB3-207ENST00000557493 KCNQ3O43525 872 aa13.5□□□□□ -0.25
TGFB3-207ENST00000557493 KCNA4P22459 653 aa13.5□□□□□ -0.25
TGFB3-207ENST00000557493 HTRA3P83110 453 aa13.5□□□□□ -0.25
TGFB3-207ENST00000557493 FSTL1Q12841 308 aa13.5□□□□□ -0.25
TGFB3-207ENST00000557493 AAMPQ13685 434 aa13.5□□□□□ -0.25
TGFB3-207ENST00000557493 FMNL2Q96PY5 1086 aa13.5□□□□□ -0.25
TGFB3-207ENST00000557493 KCPQ6ZWJ8 1503 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms