RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 POLRMTO00411 1230 aaKnown RBP21.32■■□□□ 1
TUBB3-213ENST00000557262 NUDCQ9Y266 331 aa21.32■■□□□ 1
TUBB3-213ENST00000557262 ZBTB1Q9Y2K1 713 aa21.32■■□□□ 1
TUBB3-213ENST00000557262 KCPQ6ZWJ8 1503 aa21.32■■□□□ 1
TUBB3-213ENST00000557262 STARD3NLO95772 234 aa21.31■■□□□ 1
TUBB3-213ENST00000557262 VIRMAQ69YN4 1812 aaKnown RBP21.31■■□□□ 1
TUBB3-213ENST00000557262 CANXP27824 592 aaKnown RBP21.3■■□□□ 1
TUBB3-213ENST00000557262 ZNF790Q6PG37 636 aa21.3■■□□□ 1
TUBB3-213ENST00000557262 PHACTR3Q96KR7 559 aa21.3■■□□□ 1
TUBB3-213ENST00000557262 TEX13AQ9BXU3 409 aaPredicted RBP21.3■■□□□ 1
TUBB3-213ENST00000557262 COL15A1P39059 1388 aa21.29■■□□□ 1
TUBB3-213ENST00000557262 PRKAR2BP31323 418 aa21.29■■□□□ 1
TUBB3-213ENST00000557262 ZNF496Q96IT1 587 aaPredicted RBP21.29■■□□□ 1
TUBB3-213ENST00000557262 RSPH6AQ9H0K4 717 aa21.29■■□□□ 1
TUBB3-213ENST00000557262 PPP2R1AP30153 589 aa21.28■■□□□ 1
TUBB3-213ENST00000557262 NFIXQ14938 502 aa21.28■■□□□ 1
TUBB3-213ENST00000557262 DALRD3Q5D0E6 543 aaKnown RBP21.28■■□□□ 1
TUBB3-213ENST00000557262 BCL2L12Q9HB09 334 aa21.28■■□□□ 1
TUBB3-213ENST00000557262 EIF5P55010 431 aaKnown RBP21.27■■□□□ 1
TUBB3-213ENST00000557262 HEG1Q9ULI3 1381 aa21.26■□□□□ 0.99
TUBB3-213ENST00000557262 A0A087WZG4 1122 aa21.26■□□□□ 0.99
TUBB3-213ENST00000557262 U2AF1L5P0DN76 240 aaPredicted RBP21.26■□□□□ 0.99
TUBB3-213ENST00000557262 CHRNA5P30532 468 aa21.26■□□□□ 0.99
TUBB3-213ENST00000557262 U2AF1Q01081 240 aaKnown RBP eCLIP21.26■□□□□ 0.99
TUBB3-213ENST00000557262 CEMIPQ8WUJ3 1361 aa21.25■□□□□ 0.99
TUBB3-213ENST00000557262 SERPINB2P05120 415 aa21.25■□□□□ 0.99
TUBB3-213ENST00000557262 FMNL2Q96PY5 1086 aa21.25■□□□□ 0.99
TUBB3-213ENST00000557262 CEP350Q5VT06 3117 aa21.25■□□□□ 0.99
TUBB3-213ENST00000557262 BRCA1P38398 1863 aaKnown RBP21.24■□□□□ 0.99
TUBB3-213ENST00000557262 BTBD11A6QL63 1104 aa21.24■□□□□ 0.99
TUBB3-213ENST00000557262 UBR2Q8IWV8 1755 aa21.23■□□□□ 0.99
TUBB3-213ENST00000557262 KIF3CO14782 793 aa21.22■□□□□ 0.99
TUBB3-213ENST00000557262 RTF1Q92541 710 aaKnown RBP21.22■□□□□ 0.99
TUBB3-213ENST00000557262 KCNQ3O43525 872 aa21.21■□□□□ 0.99
TUBB3-213ENST00000557262 IL6STP40189 918 aaPredicted RBP21.21■□□□□ 0.99
TUBB3-213ENST00000557262 C9orf131Q5VYM1 1079 aa21.21■□□□□ 0.99
TUBB3-213ENST00000557262 A1BGP04217 495 aa21.2■□□□□ 0.98
TUBB3-213ENST00000557262 BICDL1Q6ZP65 573 aa21.2■□□□□ 0.98
TUBB3-213ENST00000557262 HTATSF1O43719 755 aaKnown RBP21.19■□□□□ 0.98
TUBB3-213ENST00000557262 NPM2Q86SE8 214 aaKnown RBP21.19■□□□□ 0.98
TUBB3-213ENST00000557262 TBC1D2BQ9UPU7 963 aa21.19■□□□□ 0.98
TUBB3-213ENST00000557262 ZNF330Q9Y3S2 320 aaPredicted RBP21.19■□□□□ 0.98
TUBB3-213ENST00000557262 ARFGEF1Q9Y6D6 1849 aa21.19■□□□□ 0.98
TUBB3-213ENST00000557262 SIPA1L3O60292 1781 aaPredicted RBP21.18■□□□□ 0.98
TUBB3-213ENST00000557262 HSPA6P17066 643 aa21.18■□□□□ 0.98
TUBB3-213ENST00000557262 TBC1D9BQ66K14 1250 aa21.18■□□□□ 0.98
TUBB3-213ENST00000557262 USP16Q9Y5T5 823 aa21.18■□□□□ 0.98
TUBB3-213ENST00000557262 MCM10Q7L590 875 aa21.17■□□□□ 0.98
TUBB3-213ENST00000557262 AFDNP55196 1824 aaKnown RBP21.16■□□□□ 0.98
TUBB3-213ENST00000557262 H0YIN7 160 aa21.16■□□□□ 0.98
TUBB3-213ENST00000557262 C2CD5Q86YS7 1000 aa21.16■□□□□ 0.98
TUBB3-213ENST00000557262 TTLL6Q8N841 843 aa21.16■□□□□ 0.98
TUBB3-213ENST00000557262 NRXN2Q9P2S2 1712 aa21.15■□□□□ 0.98
TUBB3-213ENST00000557262 TOMM70O94826 608 aa21.15■□□□□ 0.98
TUBB3-213ENST00000557262 RNF181Q9P0P0 153 aa21.15■□□□□ 0.98
TUBB3-213ENST00000557262 SNRPA1P09661 255 aaKnown RBP21.14■□□□□ 0.97
TUBB3-213ENST00000557262 DCTN1Q14203 1278 aa21.14■□□□□ 0.97
TUBB3-213ENST00000557262 NMRK2Q9NPI5 230 aa21.14■□□□□ 0.97
TUBB3-213ENST00000557262 CAMTA2O94983 1202 aa21.13■□□□□ 0.97
TUBB3-213ENST00000557262 NEFMP07197 916 aa21.13■□□□□ 0.97
TUBB3-213ENST00000557262 TAF7Q15545 349 aaPredicted RBP21.13■□□□□ 0.97
TUBB3-213ENST00000557262 SETDB2Q96T68 719 aa21.13■□□□□ 0.97
TUBB3-213ENST00000557262 BRIP1Q9BX63 1249 aa21.13■□□□□ 0.97
TUBB3-213ENST00000557262 PDZRN3Q9UPQ7 1066 aa21.13■□□□□ 0.97
TUBB3-213ENST00000557262 PRAMEF22A3QJZ6 481 aa21.12■□□□□ 0.97
TUBB3-213ENST00000557262 PDE6BP35913 854 aa21.12■□□□□ 0.97
TUBB3-213ENST00000557262 DZIP3Q86Y13 1208 aaKnown RBP21.12■□□□□ 0.97
TUBB3-213ENST00000557262 PRR5LQ6MZQ0 368 aa21.11■□□□□ 0.97
TUBB3-213ENST00000557262 CARMIL3Q8ND23 1372 aa21.1■□□□□ 0.97
TUBB3-213ENST00000557262 KDM2BQ8NHM5 1336 aa21.1■□□□□ 0.97
TUBB3-213ENST00000557262 PIP4K2AP48426 406 aaPredicted RBP21.1■□□□□ 0.97
TUBB3-213ENST00000557262 CLEC4GQ6UXB4 293 aa21.09■□□□□ 0.97
TUBB3-213ENST00000557262 CCDC24Q8N4L8 307 aa21.09■□□□□ 0.97
TUBB3-213ENST00000557262 ZNF622Q969S3 477 aaKnown RBP eCLIP21.09■□□□□ 0.97
TUBB3-213ENST00000557262 NPHP1O15259 732 aa21.08■□□□□ 0.97
TUBB3-213ENST00000557262 LMNB1P20700 586 aa21.08■□□□□ 0.97
TUBB3-213ENST00000557262 RASSF7Q02833 373 aa21.08■□□□□ 0.97
TUBB3-213ENST00000557262 MIS18AQ9NYP9 233 aa21.08■□□□□ 0.97
TUBB3-213ENST00000557262 C16orf71Q8IYS4 520 aaPredicted RBP21.07■□□□□ 0.96
TUBB3-213ENST00000557262 CNBD1Q8NA66 436 aa21.07■□□□□ 0.96
TUBB3-213ENST00000557262 PLEKHF1Q96S99 279 aa21.07■□□□□ 0.96
TUBB3-213ENST00000557262 PNNQ9H307 717 aaKnown RBP21.07■□□□□ 0.96
TUBB3-213ENST00000557262 RRAGCQ9HB90 399 aa21.07■□□□□ 0.96
TUBB3-213ENST00000557262 SCN7AQ01118 1682 aa21.06■□□□□ 0.96
TUBB3-213ENST00000557262 RBM46Q8TBY0 533 aaKnown RBP21.06■□□□□ 0.96
TUBB3-213ENST00000557262 PNISRQ8TF01 805 aaKnown RBP21.06■□□□□ 0.96
TUBB3-213ENST00000557262 ZNF652Q9Y2D9 606 aa21.06■□□□□ 0.96
TUBB3-213ENST00000557262 SBF1O95248 1867 aa21.06■□□□□ 0.96
TUBB3-213ENST00000557262 ZC3H4Q9UPT8 1303 aaKnown RBP21.05■□□□□ 0.96
TUBB3-213ENST00000557262 DLEC1Q9Y238 1755 aa21.05■□□□□ 0.96
TUBB3-213ENST00000557262 NBPF26B4DH59 902 aa21.05■□□□□ 0.96
TUBB3-213ENST00000557262 APLP1P51693 650 aa21.05■□□□□ 0.96
TUBB3-213ENST00000557262 PRELPP51888 382 aa21.05■□□□□ 0.96
TUBB3-213ENST00000557262 ST5P78524 1137 aa21.05■□□□□ 0.96
TUBB3-213ENST00000557262 NBPF10Q6P3W6 841 aaKnown RBP21.05■□□□□ 0.96
TUBB3-213ENST00000557262 NBPF15Q8N660 670 aa21.05■□□□□ 0.96
TUBB3-213ENST00000557262 NFE2L2Q16236 605 aa21.04■□□□□ 0.96
TUBB3-213ENST00000557262 NFKBIEO00221 500 aa21.03■□□□□ 0.96
TUBB3-213ENST00000557262 RGL2O15211 777 aa21.03■□□□□ 0.96
TUBB3-213ENST00000557262 C21orf2O43822 256 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms