RNA–Protein interactions for RNA: ENST00000557172.5

KLC1-223, Transcript of kinesin light chain 1, human

TSL 4

Gene KLC1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLC1-223	ENST00000557172	STARD3NL	O95772	234 aa		12.52	□□□□□ -0.41
KLC1-223	ENST00000557172	RRP1	P56182	461 aa	Known RBP	12.52	□□□□□ -0.41
KLC1-223	ENST00000557172	C1QBP	Q07021	282 aa	Known RBP	12.52	□□□□□ -0.41
KLC1-223	ENST00000557172	DBF4	Q9UBU7	674 aa	Predicted RBP	12.52	□□□□□ -0.41
KLC1-223	ENST00000557172	USP16	Q9Y5T5	823 aa		12.52	□□□□□ -0.41
KLC1-223	ENST00000557172	SCN11A	Q9UI33	1791 aa		12.51	□□□□□ -0.41
KLC1-223	ENST00000557172	LOC102724428	A0A0B4J2F2	783 aa		12.51	□□□□□ -0.41
KLC1-223	ENST00000557172	CANX	P27824	592 aa	Known RBP	12.51	□□□□□ -0.41
KLC1-223	ENST00000557172	SIK1	P57059	783 aa		12.51	□□□□□ -0.41
KLC1-223	ENST00000557172	DNAJC10	Q8IXB1	793 aa		12.51	□□□□□ -0.41
KLC1-223	ENST00000557172	FRAT1	Q92837	279 aa	Predicted RBP	12.51	□□□□□ -0.41
KLC1-223	ENST00000557172	SLC4A9	Q96Q91	983 aa		12.51	□□□□□ -0.41
KLC1-223	ENST00000557172	NOB1	Q9ULX3	412 aa	Known RBP	12.51	□□□□□ -0.41
KLC1-223	ENST00000557172	PLIN1	O60240	522 aa		12.5	□□□□□ -0.41
KLC1-223	ENST00000557172	MS4A1	P11836	297 aa		12.5	□□□□□ -0.41
KLC1-223	ENST00000557172	ATP6V1A	P38606	617 aa		12.5	□□□□□ -0.41
KLC1-223	ENST00000557172	ZKSCAN2	Q63HK3	967 aa		12.5	□□□□□ -0.41
KLC1-223	ENST00000557172	ARHGAP45	Q92619	1136 aa		12.5	□□□□□ -0.41
KLC1-223	ENST00000557172	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
KLC1-223	ENST00000557172	KIF16B	Q96L93	1317 aa		12.5	□□□□□ -0.41
KLC1-223	ENST00000557172	PALLD	Q8WX93	1383 aa		12.5	□□□□□ -0.41
KLC1-223	ENST00000557172	SBF2	Q86WG5	1849 aa		12.5	□□□□□ -0.41
KLC1-223	ENST00000557172	NUP188	Q5SRE5	1749 aa		12.49	□□□□□ -0.41
KLC1-223	ENST00000557172	NEFL	P07196	543 aa		12.49	□□□□□ -0.41
KLC1-223	ENST00000557172	HYPK	Q9NX55	129 aa		12.49	□□□□□ -0.41
KLC1-223	ENST00000557172	CHPF2	Q9P2E5	772 aa		12.49	□□□□□ -0.41
KLC1-223	ENST00000557172	SRCAP	Q6ZRS2	3230 aa		12.49	□□□□□ -0.41
KLC1-223	ENST00000557172	ERBB4	Q15303	1308 aa		12.48	□□□□□ -0.41
KLC1-223	ENST00000557172	CYP19A1	P11511	503 aa	Predicted RBP	12.48	□□□□□ -0.41
KLC1-223	ENST00000557172	HMGB2	P26583	209 aa	Known RBP	12.48	□□□□□ -0.41
KLC1-223	ENST00000557172	PDE3A	Q14432	1141 aa		12.48	□□□□□ -0.41
KLC1-223	ENST00000557172	PDIA6	Q15084	440 aa		12.48	□□□□□ -0.41
KLC1-223	ENST00000557172	API5	Q9BZZ5	524 aa	Known RBP	12.48	□□□□□ -0.41
KLC1-223	ENST00000557172	PTPRC	P08575	1304 aa		12.47	□□□□□ -0.41
KLC1-223	ENST00000557172	APBA3	O96018	575 aa		12.47	□□□□□ -0.41
KLC1-223	ENST00000557172	A1BG	P04217	495 aa		12.47	□□□□□ -0.41
KLC1-223	ENST00000557172	ATF7IP	Q6VMQ6	1270 aa		12.47	□□□□□ -0.41
KLC1-223	ENST00000557172	G2E3	Q7L622	706 aa		12.47	□□□□□ -0.41
KLC1-223	ENST00000557172	TOGARAM1	Q9Y4F4	1720 aa		12.47	□□□□□ -0.41
KLC1-223	ENST00000557172	KCP	Q6ZWJ8	1503 aa		12.47	□□□□□ -0.41
KLC1-223	ENST00000557172	NBPF26	B4DH59	902 aa		12.46	□□□□□ -0.41
KLC1-223	ENST00000557172	PLSCR1	O15162	318 aa		12.46	□□□□□ -0.41
KLC1-223	ENST00000557172	ANXA1	P04083	346 aa		12.46	□□□□□ -0.41
KLC1-223	ENST00000557172	MYL6B	P14649	208 aa		12.46	□□□□□ -0.41
KLC1-223	ENST00000557172	FLII	Q13045	1269 aa		12.46	□□□□□ -0.41
KLC1-223	ENST00000557172	SF3B2	Q13435	895 aa	Known RBP	12.46	□□□□□ -0.41
KLC1-223	ENST00000557172	ITPK1	Q13572	414 aa		12.46	□□□□□ -0.41
KLC1-223	ENST00000557172	PROSER3	Q2NL68	480 aa		12.46	□□□□□ -0.41
KLC1-223	ENST00000557172	NBPF14	Q5TI25	921 aa		12.46	□□□□□ -0.41
KLC1-223	ENST00000557172	NBPF10	Q6P3W6	841 aa	Known RBP	12.46	□□□□□ -0.41
KLC1-223	ENST00000557172	DEFB132	Q7Z7B7	95 aa		12.46	□□□□□ -0.41
KLC1-223	ENST00000557172	NBPF15	Q8N660	670 aa		12.46	□□□□□ -0.41
KLC1-223	ENST00000557172	CCNL1	Q9UK58	526 aa	Predicted RBP	12.46	□□□□□ -0.41
KLC1-223	ENST00000557172	SIPA1L3	O60292	1781 aa	Predicted RBP	12.46	□□□□□ -0.42
KLC1-223	ENST00000557172	KDM3B	Q7LBC6	1761 aa		12.46	□□□□□ -0.42
KLC1-223	ENST00000557172	TRIM27	P14373	513 aa		12.45	□□□□□ -0.42
KLC1-223	ENST00000557172	FKBP5	Q13451	457 aa	Predicted RBP	12.45	□□□□□ -0.42
KLC1-223	ENST00000557172	SLC27A3	Q5K4L6	730 aa		12.45	□□□□□ -0.42
KLC1-223	ENST00000557172	DZIP1L	Q8IYY4	767 aa	Known RBP	12.45	□□□□□ -0.42
KLC1-223	ENST00000557172	PHAX	Q9H814	394 aa	Known RBP	12.45	□□□□□ -0.42
KLC1-223	ENST00000557172	DDX58	O95786	925 aa	Known RBP	12.44	□□□□□ -0.42
KLC1-223	ENST00000557172	BAG6	P46379	1132 aa		12.44	□□□□□ -0.42
KLC1-223	ENST00000557172	RC3H1	Q5TC82	1133 aa	Known RBP	12.44	□□□□□ -0.42
KLC1-223	ENST00000557172	C20orf194	Q5TEA3	1177 aa		12.44	□□□□□ -0.42
KLC1-223	ENST00000557172	COPS6	Q7L5N1	327 aa		12.44	□□□□□ -0.42
KLC1-223	ENST00000557172	NPM2	Q86SE8	214 aa	Known RBP	12.44	□□□□□ -0.42
KLC1-223	ENST00000557172	FTSJ3	Q8IY81	847 aa	Known RBP	12.44	□□□□□ -0.42
KLC1-223	ENST00000557172	CLUAP1	Q96AJ1	413 aa		12.44	□□□□□ -0.42
KLC1-223	ENST00000557172	CCDC87	Q9NVE4	849 aa		12.44	□□□□□ -0.42
KLC1-223	ENST00000557172	DOT1L	Q8TEK3	1739 aa		12.43	□□□□□ -0.42
KLC1-223	ENST00000557172	IL6ST	P40189	918 aa	Predicted RBP	12.43	□□□□□ -0.42
KLC1-223	ENST00000557172	CRKL	P46109	303 aa	Known RBP	12.43	□□□□□ -0.42
KLC1-223	ENST00000557172	PIP4K2A	P48426	406 aa	Predicted RBP	12.43	□□□□□ -0.42
KLC1-223	ENST00000557172	KCNQ4	P56696	695 aa		12.43	□□□□□ -0.42
KLC1-223	ENST00000557172	IRX6	P78412	446 aa	Predicted RBP	12.43	□□□□□ -0.42
KLC1-223	ENST00000557172	AIMP1	Q12904	312 aa	Known RBP	12.43	□□□□□ -0.42
KLC1-223	ENST00000557172	TXNRD1	Q16881	649 aa		12.43	□□□□□ -0.42
KLC1-223	ENST00000557172	INTS5	Q6P9B9	1019 aa	Known RBP	12.43	□□□□□ -0.42
KLC1-223	ENST00000557172	ANKRD13D	Q6ZTN6	518 aa		12.43	□□□□□ -0.42
KLC1-223	ENST00000557172	LRP10	Q7Z4F1	713 aa		12.43	□□□□□ -0.42
KLC1-223	ENST00000557172	PANK1	Q8TE04	598 aa		12.43	□□□□□ -0.42
KLC1-223	ENST00000557172	XAGE3	Q8WTP9	111 aa		12.43	□□□□□ -0.42
KLC1-223	ENST00000557172	FKBP8	Q14318	412 aa		12.42	□□□□□ -0.42
KLC1-223	ENST00000557172	KSR2	Q6VAB6	950 aa		12.42	□□□□□ -0.42
KLC1-223	ENST00000557172	PROM2	Q8N271	834 aa		12.42	□□□□□ -0.42
KLC1-223	ENST00000557172	LINC00116	Q8NCU8	138 aa		12.42	□□□□□ -0.42
KLC1-223	ENST00000557172	TNN	Q9UQP3	1299 aa		12.42	□□□□□ -0.42
KLC1-223	ENST00000557172	PI4KAP2	A4QPH2	592 aa		12.41	□□□□□ -0.42
KLC1-223	ENST00000557172	RLBP1	P12271	317 aa		12.41	□□□□□ -0.42
KLC1-223	ENST00000557172	ERICH6B	Q5W0A0	696 aa		12.41	□□□□□ -0.42
KLC1-223	ENST00000557172	RIC3	Q7Z5B4	369 aa		12.41	□□□□□ -0.42
KLC1-223	ENST00000557172	PI4KAP1	Q8N8J0	262 aa		12.41	□□□□□ -0.42
KLC1-223	ENST00000557172	LRRC4B	Q9NT99	713 aa		12.41	□□□□□ -0.42
KLC1-223	ENST00000557172	ZBTB1	Q9Y2K1	713 aa		12.41	□□□□□ -0.42
KLC1-223	ENST00000557172	ITGB4	P16144	1822 aa		12.41	□□□□□ -0.42
KLC1-223	ENST00000557172	PAPPA	Q13219	1627 aa		12.4	□□□□□ -0.42
KLC1-223	ENST00000557172	CNTNAP4	Q9C0A0	1308 aa		12.4	□□□□□ -0.42
KLC1-223	ENST00000557172		F6X3S4	739 aa		12.4	□□□□□ -0.42
KLC1-223	ENST00000557172	RPS6KA4	O75676	772 aa		12.4	□□□□□ -0.42
KLC1-223	ENST00000557172	CCT4	P50991	539 aa	Known RBP	12.4	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms