RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 FBLN1P23142 703 aa13.54□□□□□ -0.24
HNRNPC-228ENST00000557033 R3HDM1Q15032 1099 aaKnown RBP13.54□□□□□ -0.24
HNRNPC-228ENST00000557033 LTV1Q96GA3 475 aaPredicted RBP13.54□□□□□ -0.24
HNRNPC-228ENST00000557033 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.54□□□□□ -0.24
HNRNPC-228ENST00000557033 POLR3EQ9NVU0 708 aa13.54□□□□□ -0.24
HNRNPC-228ENST00000557033 COG6Q9Y2V7 657 aa13.54□□□□□ -0.24
HNRNPC-228ENST00000557033 TNS2Q63HR2 1409 aa13.54□□□□□ -0.24
HNRNPC-228ENST00000557033 FAM208AQ9UK61 1670 aaKnown RBP13.53□□□□□ -0.24
HNRNPC-228ENST00000557033 AEBP1Q8IUX7 1158 aa13.53□□□□□ -0.24
HNRNPC-228ENST00000557033 RTL1A6NKG5 1358 aa13.53□□□□□ -0.24
HNRNPC-228ENST00000557033 KIF24Q5T7B8 1368 aa13.53□□□□□ -0.24
HNRNPC-228ENST00000557033 RREB1Q92766 1687 aa13.53□□□□□ -0.24
HNRNPC-228ENST00000557033 HSPA5P11021 654 aaKnown RBP13.52□□□□□ -0.25
HNRNPC-228ENST00000557033 RRS1Q15050 365 aaKnown RBP13.52□□□□□ -0.25
HNRNPC-228ENST00000557033 RGPD3A6NKT7 1758 aaPredicted RBP13.52□□□□□ -0.25
HNRNPC-228ENST00000557033 RGPD4Q7Z3J3 1758 aa13.52□□□□□ -0.25
HNRNPC-228ENST00000557033 KIF20BQ96Q89 1820 aa13.51□□□□□ -0.25
HNRNPC-228ENST00000557033 MYOM1P52179 1685 aa13.51□□□□□ -0.25
HNRNPC-228ENST00000557033 PTF1AQ7RTS3 328 aa13.51□□□□□ -0.25
HNRNPC-228ENST00000557033 LRP5O75197 1615 aa13.5□□□□□ -0.25
HNRNPC-228ENST00000557033 NSD3Q9BZ95 1437 aa13.5□□□□□ -0.25
HNRNPC-228ENST00000557033 CGNL1Q0VF96 1302 aa13.5□□□□□ -0.25
HNRNPC-228ENST00000557033 G3V3G9 751 aa13.5□□□□□ -0.25
HNRNPC-228ENST00000557033 BANK1Q8NDB2 785 aa13.5□□□□□ -0.25
HNRNPC-228ENST00000557033 CDHR5Q9HBB8 845 aa13.5□□□□□ -0.25
HNRNPC-228ENST00000557033 FAM217BQ9NTX9 383 aaPredicted RBP13.5□□□□□ -0.25
HNRNPC-228ENST00000557033 NUP188Q5SRE5 1749 aa13.5□□□□□ -0.25
HNRNPC-228ENST00000557033 INSRP06213 1382 aa13.49□□□□□ -0.25
HNRNPC-228ENST00000557033 IRX5P78411 483 aaPredicted RBP13.49□□□□□ -0.25
HNRNPC-228ENST00000557033 NBPF6Q5VWK0 638 aa13.49□□□□□ -0.25
HNRNPC-228ENST00000557033 NBPF4Q96M43 638 aa13.49□□□□□ -0.25
HNRNPC-228ENST00000557033 POLR3GLQ9BT43 218 aa13.49□□□□□ -0.25
HNRNPC-228ENST00000557033 OCEL1Q9H607 264 aa13.49□□□□□ -0.25
HNRNPC-228ENST00000557033 ANO8Q9HCE9 1232 aaPredicted RBP13.49□□□□□ -0.25
HNRNPC-228ENST00000557033 SMG6Q86US8 1419 aaKnown RBP13.48□□□□□ -0.25
HNRNPC-228ENST00000557033 SRCAPQ6ZRS2 3230 aa13.48□□□□□ -0.25
HNRNPC-228ENST00000557033 KCNQ2O43526 872 aa13.48□□□□□ -0.25
HNRNPC-228ENST00000557033 HSP90AB2PQ58FF8 381 aa13.48□□□□□ -0.25
HNRNPC-228ENST00000557033 DDX54Q8TDD1 881 aaKnown RBP13.48□□□□□ -0.25
HNRNPC-228ENST00000557033 ZNF330Q9Y3S2 320 aaPredicted RBP13.48□□□□□ -0.25
HNRNPC-228ENST00000557033 FLT4P35916 1363 aa13.47□□□□□ -0.25
HNRNPC-228ENST00000557033 TXNRD1Q16881 649 aa13.47□□□□□ -0.25
HNRNPC-228ENST00000557033 MYSM1Q5VVJ2 828 aa13.47□□□□□ -0.25
HNRNPC-228ENST00000557033 TMEM92Q6UXU6 159 aa13.47□□□□□ -0.25
HNRNPC-228ENST00000557033 RETREG2Q8NC44 543 aa13.47□□□□□ -0.25
HNRNPC-228ENST00000557033 ZCRB1Q8TBF4 217 aaKnown RBP13.47□□□□□ -0.25
HNRNPC-228ENST00000557033 SNRKQ9NRH2 765 aa13.47□□□□□ -0.25
HNRNPC-228ENST00000557033 RAPGEF4Q8WZA2 1011 aa13.46□□□□□ -0.25
HNRNPC-228ENST00000557033 ACSBG1Q96GR2 724 aa13.46□□□□□ -0.25
HNRNPC-228ENST00000557033 PANK3Q9H999 370 aa13.46□□□□□ -0.25
HNRNPC-228ENST00000557033 NHSQ6T4R5 1651 aa13.46□□□□□ -0.26
HNRNPC-228ENST00000557033 RGPD2P0DJD1 1756 aa13.45□□□□□ -0.26
HNRNPC-228ENST00000557033 WASHC2AQ641Q2 1341 aa13.45□□□□□ -0.26
HNRNPC-228ENST00000557033 C19orf67A6NJJ6 358 aa13.45□□□□□ -0.26
HNRNPC-228ENST00000557033 TATP17735 454 aaPredicted RBP13.44□□□□□ -0.26
HNRNPC-228ENST00000557033 RGS22Q8NE09 1264 aa13.44□□□□□ -0.26
HNRNPC-228ENST00000557033 EPAS1Q99814 870 aa13.44□□□□□ -0.26
HNRNPC-228ENST00000557033 EMILIN1Q9Y6C2 1016 aa13.44□□□□□ -0.26
HNRNPC-228ENST00000557033 PPM1GO15355 546 aaPredicted RBP13.43□□□□□ -0.26
HNRNPC-228ENST00000557033 RFC5P40937 340 aa13.43□□□□□ -0.26
HNRNPC-228ENST00000557033 STK32BQ9NY57 414 aa13.43□□□□□ -0.26
HNRNPC-228ENST00000557033 POLKQ9UBT6 870 aa13.43□□□□□ -0.26
HNRNPC-228ENST00000557033 MAP2P11137 1827 aaKnown RBP13.43□□□□□ -0.26
HNRNPC-228ENST00000557033 PHF14O94880 888 aa13.42□□□□□ -0.26
HNRNPC-228ENST00000557033 CLK2P49760 499 aaKnown RBP13.42□□□□□ -0.26
HNRNPC-228ENST00000557033 USHBP1Q8N6Y0 703 aa13.42□□□□□ -0.26
HNRNPC-228ENST00000557033 PTCD2Q8WV60 388 aaKnown RBP13.42□□□□□ -0.26
HNRNPC-228ENST00000557033 SPON1Q9HCB6 807 aa13.42□□□□□ -0.26
HNRNPC-228ENST00000557033 MEGF6O75095 1541 aa13.42□□□□□ -0.26
HNRNPC-228ENST00000557033 MAP3K7O43318 606 aa13.41□□□□□ -0.26
HNRNPC-228ENST00000557033 IRF5Q13568 498 aa13.41□□□□□ -0.26
HNRNPC-228ENST00000557033 SLC15A2Q16348 729 aa13.41□□□□□ -0.26
HNRNPC-228ENST00000557033 NSD2O96028 1365 aa13.41□□□□□ -0.26
HNRNPC-228ENST00000557033 KAT6BQ8WYB5 2073 aa13.41□□□□□ -0.26
HNRNPC-228ENST00000557033 BTAF1O14981 1849 aa13.41□□□□□ -0.26
HNRNPC-228ENST00000557033 ANKRD26Q9UPS8 1709 aa13.4□□□□□ -0.26
HNRNPC-228ENST00000557033 TMEM259Q4ZIN3 620 aa13.4□□□□□ -0.26
HNRNPC-228ENST00000557033 SLC27A3Q5K4L6 730 aa13.4□□□□□ -0.26
HNRNPC-228ENST00000557033 GALR2O43603 387 aaPredicted RBP13.39□□□□□ -0.27
HNRNPC-228ENST00000557033 OATP04181 439 aa13.39□□□□□ -0.27
HNRNPC-228ENST00000557033 ATN1P54259 1190 aaPredicted RBP13.39□□□□□ -0.27
HNRNPC-228ENST00000557033 METTL3Q86U44 580 aaKnown RBP13.39□□□□□ -0.27
HNRNPC-228ENST00000557033 SYTL4Q96C24 671 aaPredicted RBP13.39□□□□□ -0.27
HNRNPC-228ENST00000557033 L3MBTL3Q96JM7 780 aaPredicted RBP13.39□□□□□ -0.27
HNRNPC-228ENST00000557033 GZF1Q9H116 711 aaPredicted RBP13.39□□□□□ -0.27
HNRNPC-228ENST00000557033 KNSTRNQ9Y448 316 aa13.39□□□□□ -0.27
HNRNPC-228ENST00000557033 SHANK3Q9BYB0 1731 aa13.39□□□□□ -0.27
HNRNPC-228ENST00000557033 PCDH11XQ9BZA7 1347 aa13.39□□□□□ -0.27
HNRNPC-228ENST00000557033 PCDH11YQ9BZA8 1340 aa13.39□□□□□ -0.27
HNRNPC-228ENST00000557033 HMGB2P26583 209 aaKnown RBP13.38□□□□□ -0.27
HNRNPC-228ENST00000557033 TNNT2P45379 298 aaPredicted RBP13.38□□□□□ -0.27
HNRNPC-228ENST00000557033 IER5LQ5T953 404 aa13.38□□□□□ -0.27
HNRNPC-228ENST00000557033 TMCO4Q5TGY1 634 aa13.38□□□□□ -0.27
HNRNPC-228ENST00000557033 EYA1Q99502 592 aa13.38□□□□□ -0.27
HNRNPC-228ENST00000557033 NCAPD2Q15021 1401 aa13.38□□□□□ -0.27
HNRNPC-228ENST00000557033 PPP2R2DQ66LE6 453 aa13.37□□□□□ -0.27
HNRNPC-228ENST00000557033 MORC1Q86VD1 984 aa13.37□□□□□ -0.27
HNRNPC-228ENST00000557033 TBC1D2Q9BYX2 928 aa13.37□□□□□ -0.27
HNRNPC-228ENST00000557033 LRRC4BQ9NT99 713 aa13.37□□□□□ -0.27
HNRNPC-228ENST00000557033 SPG7Q9UQ90 795 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms