RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 ZPR1O75312 459 aa30.16■■■□□ 2.42
TMEM260-214ENST00000556975 FMNL2Q96PY5 1086 aa30.16■■■□□ 2.42
TMEM260-214ENST00000556975 C10orf71Q711Q0 1435 aa30.15■■■□□ 2.42
TMEM260-214ENST00000556975 TM4SF1P30408 202 aa30.15■■■□□ 2.42
TMEM260-214ENST00000556975 NARFQ9UHQ1 456 aa30.15■■■□□ 2.42
TMEM260-214ENST00000556975 COL15A1P39059 1388 aa30.15■■■□□ 2.42
TMEM260-214ENST00000556975 USPL1Q5W0Q7 1092 aa30.14■■■□□ 2.42
TMEM260-214ENST00000556975 MCM10Q7L590 875 aa30.14■■■□□ 2.42
TMEM260-214ENST00000556975 PLEKHF1Q96S99 279 aa30.14■■■□□ 2.42
TMEM260-214ENST00000556975 KCNQ3O43525 872 aa30.12■■■□□ 2.41
TMEM260-214ENST00000556975 NEFMP07197 916 aa30.12■■■□□ 2.41
TMEM260-214ENST00000556975 EIF5P55010 431 aaKnown RBP30.12■■■□□ 2.41
TMEM260-214ENST00000556975 PXDNLA1KZ92 1463 aa30.12■■■□□ 2.41
TMEM260-214ENST00000556975 CANXP27824 592 aaKnown RBP30.11■■■□□ 2.41
TMEM260-214ENST00000556975 DDR1Q08345 913 aa30.11■■■□□ 2.41
TMEM260-214ENST00000556975 PNNQ9H307 717 aaKnown RBP30.11■■■□□ 2.41
TMEM260-214ENST00000556975 KIAA1551Q9HCM1 1747 aa30.1■■■□□ 2.41
TMEM260-214ENST00000556975 C1QTNF8P60827 252 aa30.1■■■□□ 2.41
TMEM260-214ENST00000556975 SENP3-EIF4A1A0A087X0R7 540 aa30.09■■■□□ 2.41
TMEM260-214ENST00000556975 DCTN1Q14203 1278 aa30.09■■■□□ 2.41
TMEM260-214ENST00000556975 A0A087WZG4 1122 aa30.08■■■□□ 2.41
TMEM260-214ENST00000556975 POLRMTO00411 1230 aaKnown RBP30.08■■■□□ 2.41
TMEM260-214ENST00000556975 A0A0G2JLW4 131 aa30.07■■■□□ 2.4
TMEM260-214ENST00000556975 BCL2L12Q9HB09 334 aa30.07■■■□□ 2.4
TMEM260-214ENST00000556975 GIGYF1O75420 1035 aaPredicted RBP30.06■■■□□ 2.4
TMEM260-214ENST00000556975 IL6STP40189 918 aaPredicted RBP30.06■■■□□ 2.4
TMEM260-214ENST00000556975 TAF7Q15545 349 aaPredicted RBP30.06■■■□□ 2.4
TMEM260-214ENST00000556975 N4BP2Q86UW6 1770 aaPredicted RBP30.05■■■□□ 2.4
TMEM260-214ENST00000556975 WWC3Q9ULE0 1092 aa30.05■■■□□ 2.4
TMEM260-214ENST00000556975 DPEP1P16444 411 aa30.04■■■□□ 2.4
TMEM260-214ENST00000556975 NFIXQ14938 502 aa30.04■■■□□ 2.4
TMEM260-214ENST00000556975 NFE2L2Q16236 605 aa30.04■■■□□ 2.4
TMEM260-214ENST00000556975 DLG5Q8TDM6 1919 aa30.04■■■□□ 2.4
TMEM260-214ENST00000556975 MYBBP1AQ9BQG0 1328 aaKnown RBP30.03■■■□□ 2.4
TMEM260-214ENST00000556975 A1BGP04217 495 aa30.03■■■□□ 2.4
TMEM260-214ENST00000556975 USP16Q9Y5T5 823 aa30.03■■■□□ 2.4
TMEM260-214ENST00000556975 SNRPA1P09661 255 aaKnown RBP30.02■■■□□ 2.4
TMEM260-214ENST00000556975 KCNA3P22001 575 aa30.02■■■□□ 2.4
TMEM260-214ENST00000556975 MAPK8IP3Q9UPT6 1336 aa30■■■□□ 2.39
TMEM260-214ENST00000556975 PNISRQ8TF01 805 aaKnown RBP29.99■■■□□ 2.39
TMEM260-214ENST00000556975 BRCA1P38398 1863 aaKnown RBP29.99■■■□□ 2.39
TMEM260-214ENST00000556975 PRAMEF22A3QJZ6 481 aa29.98■■■□□ 2.39
TMEM260-214ENST00000556975 BCS1LQ9Y276 419 aa29.98■■■□□ 2.39
TMEM260-214ENST00000556975 NRXN2Q9P2S2 1712 aa29.98■■■□□ 2.39
TMEM260-214ENST00000556975 SERPINB2P05120 415 aa29.97■■■□□ 2.39
TMEM260-214ENST00000556975 PIM2Q9P1W9 311 aa29.97■■■□□ 2.39
TMEM260-214ENST00000556975 TBC1D2BQ9UPU7 963 aa29.97■■■□□ 2.39
TMEM260-214ENST00000556975 AFDNP55196 1824 aaKnown RBP29.96■■■□□ 2.39
TMEM260-214ENST00000556975 NPM2Q86SE8 214 aaKnown RBP29.96■■■□□ 2.39
TMEM260-214ENST00000556975 MIS18AQ9NYP9 233 aa29.95■■■□□ 2.39
TMEM260-214ENST00000556975 ZNF330Q9Y3S2 320 aaPredicted RBP29.95■■■□□ 2.39
TMEM260-214ENST00000556975 ATP10DQ9P241 1426 aa29.95■■■□□ 2.38
TMEM260-214ENST00000556975 ADCY9O60503 1353 aa29.93■■■□□ 2.38
TMEM260-214ENST00000556975 SCN7AQ01118 1682 aa29.93■■■□□ 2.38
TMEM260-214ENST00000556975 CAMTA2O94983 1202 aa29.93■■■□□ 2.38
TMEM260-214ENST00000556975 ZEB1P37275 1124 aaPredicted RBP29.92■■■□□ 2.38
TMEM260-214ENST00000556975 TBC1D9BQ66K14 1250 aa29.92■■■□□ 2.38
TMEM260-214ENST00000556975 KDM3BQ7LBC6 1761 aa29.91■■■□□ 2.38
TMEM260-214ENST00000556975 CHRNA5P30532 468 aa29.91■■■□□ 2.38
TMEM260-214ENST00000556975 THUMPD2Q9BTF0 503 aaKnown RBP29.91■■■□□ 2.38
TMEM260-214ENST00000556975 PRKRIP1Q9H875 184 aaPredicted RBP29.91■■■□□ 2.38
TMEM260-214ENST00000556975 BICDL1Q6ZP65 573 aa29.9■■■□□ 2.38
TMEM260-214ENST00000556975 DZIP3Q86Y13 1208 aaKnown RBP29.9■■■□□ 2.38
TMEM260-214ENST00000556975 ARFGEF1Q9Y6D6 1849 aa29.89■■■□□ 2.38
TMEM260-214ENST00000556975 NBPF26B4DH59 902 aa29.89■■■□□ 2.38
TMEM260-214ENST00000556975 RIPK4P57078 832 aa29.89■■■□□ 2.38
TMEM260-214ENST00000556975 DALRD3Q5D0E6 543 aaKnown RBP29.89■■■□□ 2.38
TMEM260-214ENST00000556975 NBPF10Q6P3W6 841 aaKnown RBP29.89■■■□□ 2.38
TMEM260-214ENST00000556975 NBPF15Q8N660 670 aa29.89■■■□□ 2.38
TMEM260-214ENST00000556975 TMPOP42166 694 aaKnown RBP29.88■■■□□ 2.37
TMEM260-214ENST00000556975 PIP4K2AP48426 406 aaPredicted RBP29.88■■■□□ 2.37
TMEM260-214ENST00000556975 EIF4A1P60842 406 aaKnown RBP29.88■■■□□ 2.37
TMEM260-214ENST00000556975 CLEC4GQ6UXB4 293 aa29.87■■■□□ 2.37
TMEM260-214ENST00000556975 ARHGAP27Q6ZUM4 889 aa29.87■■■□□ 2.37
TMEM260-214ENST00000556975 CEP350Q5VT06 3117 aa29.86■■■□□ 2.37
TMEM260-214ENST00000556975 RGL2O15211 777 aa29.86■■■□□ 2.37
TMEM260-214ENST00000556975 ZNF526Q8TF50 670 aaPredicted RBP29.86■■■□□ 2.37
TMEM260-214ENST00000556975 CARMIL3Q8ND23 1372 aa29.86■■■□□ 2.37
TMEM260-214ENST00000556975 BCORQ6W2J9 1755 aa29.85■■■□□ 2.37
TMEM260-214ENST00000556975 SETDB2Q96T68 719 aa29.85■■■□□ 2.37
TMEM260-214ENST00000556975 GPBP1L1Q9HC44 474 aaPredicted RBP29.85■■■□□ 2.37
TMEM260-214ENST00000556975 LMOD3Q0VAK6 560 aa29.84■■■□□ 2.37
TMEM260-214ENST00000556975 BABAM1Q9NWV8 329 aa29.84■■■□□ 2.37
TMEM260-214ENST00000556975 LAMB4A4D0S4 1761 aa29.83■■■□□ 2.37
TMEM260-214ENST00000556975 WDR43Q15061 677 aaKnown RBP eCLIP29.83■■■□□ 2.37
TMEM260-214ENST00000556975 PRR5LQ6MZQ0 368 aa29.82■■■□□ 2.36
TMEM260-214ENST00000556975 RUNDC1Q96C34 613 aa29.82■■■□□ 2.36
TMEM260-214ENST00000556975 BRIP1Q9BX63 1249 aa29.82■■■□□ 2.36
TMEM260-214ENST00000556975 PDZRN3Q9UPQ7 1066 aa29.82■■■□□ 2.36
TMEM260-214ENST00000556975 ADAMTS8Q9UP79 889 aa29.81■■■□□ 2.36
TMEM260-214ENST00000556975 ZNF652Q9Y2D9 606 aa29.81■■■□□ 2.36
TMEM260-214ENST00000556975 DLEC1Q9Y238 1755 aa29.8■■■□□ 2.36
TMEM260-214ENST00000556975 H0YIN7 160 aa29.8■■■□□ 2.36
TMEM260-214ENST00000556975 C2CD5Q86YS7 1000 aa29.8■■■□□ 2.36
TMEM260-214ENST00000556975 TSPYL4Q9UJ04 414 aa29.8■■■□□ 2.36
TMEM260-214ENST00000556975 PDE6BP35913 854 aa29.79■■■□□ 2.36
TMEM260-214ENST00000556975 CCDC146Q8IYE0 955 aa29.79■■■□□ 2.36
TMEM260-214ENST00000556975 TTLL6Q8N841 843 aa29.78■■■□□ 2.36
TMEM260-214ENST00000556975 ANKRD31Q8N7Z5 1873 aa29.77■■■□□ 2.36
TMEM260-214ENST00000556975 CNBD1Q8NA66 436 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms