RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 ANKRD24Q8TF21 1146 aa8.39□□□□□ -1.07
ATXN3-245ENST00000556958 CCDC87Q9NVE4 849 aa8.39□□□□□ -1.07
ATXN3-245ENST00000556958 COL24A1Q17RW2 1714 aa8.39□□□□□ -1.07
ATXN3-245ENST00000556958 NHSQ6T4R5 1651 aa8.39□□□□□ -1.07
ATXN3-245ENST00000556958 CNTNAP1P78357 1384 aa8.38□□□□□ -1.07
ATXN3-245ENST00000556958 ZCRB1Q8TBF4 217 aaKnown RBP8.38□□□□□ -1.07
ATXN3-245ENST00000556958 DCAF11Q8TEB1 546 aa8.38□□□□□ -1.07
ATXN3-245ENST00000556958 SMARCC1Q92922 1105 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-245ENST00000556958 SLIT3O75094 1523 aa8.38□□□□□ -1.07
ATXN3-245ENST00000556958 TTC21BQ7Z4L5 1316 aa8.37□□□□□ -1.07
ATXN3-245ENST00000556958 TTC21AQ8NDW8 1320 aa8.37□□□□□ -1.07
ATXN3-245ENST00000556958 HSPA8P11142 646 aaKnown RBP8.37□□□□□ -1.07
ATXN3-245ENST00000556958 VEGFBP49765 207 aa8.37□□□□□ -1.07
ATXN3-245ENST00000556958 DCAF5Q96JK2 942 aa8.37□□□□□ -1.07
ATXN3-245ENST00000556958 TRPM1Q7Z4N2 1603 aa8.36□□□□□ -1.07
ATXN3-245ENST00000556958 CICQ96RK0 1608 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-245ENST00000556958 ADGRB1O14514 1584 aa8.36□□□□□ -1.07
ATXN3-245ENST00000556958 TMF1P82094 1093 aa8.36□□□□□ -1.07
ATXN3-245ENST00000556958 SMIM5Q71RC9 77 aa8.36□□□□□ -1.07
ATXN3-245ENST00000556958 BEGAINQ9BUH8 593 aa8.36□□□□□ -1.07
ATXN3-245ENST00000556958 NSD2O96028 1365 aa8.35□□□□□ -1.07
ATXN3-245ENST00000556958 LMNB1P20700 586 aa8.35□□□□□ -1.07
ATXN3-245ENST00000556958 PRPF38BQ5VTL8 546 aaKnown RBP8.35□□□□□ -1.07
ATXN3-245ENST00000556958 MS4A4AQ96JQ5 239 aa8.35□□□□□ -1.07
ATXN3-245ENST00000556958 PARP3Q9Y6F1 533 aa8.35□□□□□ -1.07
ATXN3-245ENST00000556958 QSER1Q2KHR3 1735 aa8.34□□□□□ -1.07
ATXN3-245ENST00000556958 TMEM88BA6NKF7 163 aa8.34□□□□□ -1.07
ATXN3-245ENST00000556958 KCNA3P22001 575 aa8.34□□□□□ -1.07
ATXN3-245ENST00000556958 PALLDQ8WX93 1383 aa8.34□□□□□ -1.07
ATXN3-245ENST00000556958 AKAP12Q02952 1782 aa8.33□□□□□ -1.08
ATXN3-245ENST00000556958 DEFB115Q30KQ5 88 aa8.33□□□□□ -1.08
ATXN3-245ENST00000556958 TRAPPC3LQ5T215 181 aa8.33□□□□□ -1.08
ATXN3-245ENST00000556958 ADGRD1Q6QNK2 874 aa8.33□□□□□ -1.08
ATXN3-245ENST00000556958 MPRIPQ6WCQ1 1025 aa8.33□□□□□ -1.08
ATXN3-245ENST00000556958 AMIGO3Q86WK7 504 aa8.33□□□□□ -1.08
ATXN3-245ENST00000556958 RGL2O15211 777 aa8.32□□□□□ -1.08
ATXN3-245ENST00000556958 GNPATO15228 680 aa8.32□□□□□ -1.08
ATXN3-245ENST00000556958 NUDT7P0C024 238 aa8.32□□□□□ -1.08
ATXN3-245ENST00000556958 GCC1Q96CN9 775 aa8.32□□□□□ -1.08
ATXN3-245ENST00000556958 CGNL1Q0VF96 1302 aa8.31□□□□□ -1.08
ATXN3-245ENST00000556958 BTAF1O14981 1849 aa8.31□□□□□ -1.08
ATXN3-245ENST00000556958 POTECB2RU33 542 aa8.31□□□□□ -1.08
ATXN3-245ENST00000556958 IP6K1Q92551 441 aa8.31□□□□□ -1.08
ATXN3-245ENST00000556958 LTV1Q96GA3 475 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-245ENST00000556958 LHX6Q9UPM6 363 aa8.31□□□□□ -1.08
ATXN3-245ENST00000556958 RTCBQ9Y3I0 505 aaKnown RBP8.31□□□□□ -1.08
ATXN3-245ENST00000556958 CENPJQ9HC77 1338 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-245ENST00000556958 ITSN1Q15811 1721 aa8.3□□□□□ -1.08
ATXN3-245ENST00000556958 LOC102724428A0A0B4J2F2 783 aa8.3□□□□□ -1.08
ATXN3-245ENST00000556958 SIK1P57059 783 aa8.3□□□□□ -1.08
ATXN3-245ENST00000556958 IRX2Q9BZI1 471 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-245ENST00000556958 COL18A1P39060 1754 aa8.3□□□□□ -1.08
ATXN3-245ENST00000556958 EVC2Q86UK5 1308 aa8.29□□□□□ -1.08
ATXN3-245ENST00000556958 WDR33Q9C0J8 1336 aaKnown RBP8.29□□□□□ -1.08
ATXN3-245ENST00000556958 RASSF10A6NK89 507 aa8.29□□□□□ -1.08
ATXN3-245ENST00000556958 RFC4P35249 363 aa8.29□□□□□ -1.08
ATXN3-245ENST00000556958 LDHDQ86WU2 507 aa8.29□□□□□ -1.08
ATXN3-245ENST00000556958 RAPGEF4Q8WZA2 1011 aa8.29□□□□□ -1.08
ATXN3-245ENST00000556958 MCOLN1Q9GZU1 580 aa8.29□□□□□ -1.08
ATXN3-245ENST00000556958 PASKQ96RG2 1323 aa8.29□□□□□ -1.08
ATXN3-245ENST00000556958 IQCA1LA6NCM1 817 aa8.28□□□□□ -1.08
ATXN3-245ENST00000556958 CA12O43570 354 aa8.28□□□□□ -1.08
ATXN3-245ENST00000556958 ECE1P42892 770 aa8.28□□□□□ -1.08
ATXN3-245ENST00000556958 RASSF7Q02833 373 aa8.28□□□□□ -1.08
ATXN3-245ENST00000556958 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.28□□□□□ -1.08
ATXN3-245ENST00000556958 LINC00116Q8NCU8 138 aa8.28□□□□□ -1.08
ATXN3-245ENST00000556958 USP31Q70CQ4 1352 aa8.27□□□□□ -1.09
ATXN3-245ENST00000556958 HRO43593 1189 aa8.27□□□□□ -1.09
ATXN3-245ENST00000556958 RGS20O76081 388 aa8.27□□□□□ -1.09
ATXN3-245ENST00000556958 GYS1P13807 737 aa8.27□□□□□ -1.09
ATXN3-245ENST00000556958 TATP17735 454 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-245ENST00000556958 ATP6V1AP38606 617 aa8.27□□□□□ -1.09
ATXN3-245ENST00000556958 PPARGC1BQ86YN6 1023 aaKnown RBP8.27□□□□□ -1.09
ATXN3-245ENST00000556958 PIGBQ92521 554 aa8.27□□□□□ -1.09
ATXN3-245ENST00000556958 KTN1Q86UP2 1357 aaKnown RBP8.26□□□□□ -1.09
ATXN3-245ENST00000556958 SLC24A1O60721 1099 aa8.26□□□□□ -1.09
ATXN3-245ENST00000556958 CHRNA5P30532 468 aa8.26□□□□□ -1.09
ATXN3-245ENST00000556958 DGKZQ13574 1117 aa8.26□□□□□ -1.09
ATXN3-245ENST00000556958 ERFEQ4G0M1 354 aa8.26□□□□□ -1.09
ATXN3-245ENST00000556958 ARHGEF1Q92888 912 aaKnown RBP8.26□□□□□ -1.09
ATXN3-245ENST00000556958 ABT1Q9ULW3 272 aaKnown RBP8.26□□□□□ -1.09
ATXN3-245ENST00000556958 PCDH11XQ9BZA7 1347 aa8.26□□□□□ -1.09
ATXN3-245ENST00000556958 PCDH11YQ9BZA8 1340 aa8.26□□□□□ -1.09
ATXN3-245ENST00000556958 ITGBL1O95965 494 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-245ENST00000556958 AMPHP49418 695 aa8.25□□□□□ -1.09
ATXN3-245ENST00000556958 NBPF1Q3BBV0 1214 aa8.25□□□□□ -1.09
ATXN3-245ENST00000556958 RC3H1Q5TC82 1133 aaKnown RBP8.25□□□□□ -1.09
ATXN3-245ENST00000556958 NME9Q86XW9 330 aa8.25□□□□□ -1.09
ATXN3-245ENST00000556958 TTLL6Q8N841 843 aa8.25□□□□□ -1.09
ATXN3-245ENST00000556958 GPR101Q96P66 508 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-245ENST00000556958 KDM6AO15550 1401 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-245ENST00000556958 NFAT5O94916 1531 aa8.24□□□□□ -1.09
ATXN3-245ENST00000556958 PDE4DIPQ5VU43 2346 aa8.24□□□□□ -1.09
ATXN3-245ENST00000556958 ARHGAP33O14559 1287 aa8.24□□□□□ -1.09
ATXN3-245ENST00000556958 RPS6KA4O75676 772 aa8.24□□□□□ -1.09
ATXN3-245ENST00000556958 MAP2K2P36507 400 aa8.24□□□□□ -1.09
ATXN3-245ENST00000556958 NBPF15Q8N660 670 aa8.24□□□□□ -1.09
ATXN3-245ENST00000556958 KCTD12Q96CX2 325 aaKnown RBP8.24□□□□□ -1.09
ATXN3-245ENST00000556958 WNK3Q9BYP7 1800 aa8.24□□□□□ -1.09
ATXN3-245ENST00000556958 KAT6BQ8WYB5 2073 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms