RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 MS4A1P11836 297 aa30.35■■■□□ 2.45
SIX4-203ENST00000556952 CCDC30Q5VVM6 783 aa30.35■■■□□ 2.45
SIX4-203ENST00000556952 PALLDQ8WX93 1383 aa30.34■■■□□ 2.45
SIX4-203ENST00000556952 SLC39A6Q13433 755 aa30.34■■■□□ 2.45
SIX4-203ENST00000556952 ASAP1Q9ULH1 1129 aa30.33■■■□□ 2.45
SIX4-203ENST00000556952 GIGYF1O75420 1035 aaPredicted RBP30.32■■■□□ 2.45
SIX4-203ENST00000556952 C20orf194Q5TEA3 1177 aa30.32■■■□□ 2.45
SIX4-203ENST00000556952 ARHGAP45Q92619 1136 aa30.32■■■□□ 2.45
SIX4-203ENST00000556952 NOB1Q9ULX3 412 aaKnown RBP30.32■■■□□ 2.45
SIX4-203ENST00000556952 KCPQ6ZWJ8 1503 aa30.32■■■□□ 2.44
SIX4-203ENST00000556952 ATF7IPQ6VMQ6 1270 aa30.32■■■□□ 2.44
SIX4-203ENST00000556952 FMNL2Q96PY5 1086 aa30.32■■■□□ 2.44
SIX4-203ENST00000556952 STK31Q9BXU1 1019 aa30.32■■■□□ 2.44
SIX4-203ENST00000556952 LRRC4BQ9NT99 713 aa30.32■■■□□ 2.44
SIX4-203ENST00000556952 KCNQ4P56696 695 aa30.31■■■□□ 2.44
SIX4-203ENST00000556952 HDGFL1Q5TGJ6 251 aa30.31■■■□□ 2.44
SIX4-203ENST00000556952 TAF1LQ8IZX4 1826 aa30.31■■■□□ 2.44
SIX4-203ENST00000556952 ATG3Q9NT62 314 aa30.3■■■□□ 2.44
SIX4-203ENST00000556952 TCERG1O14776 1098 aaKnown RBP30.28■■■□□ 2.44
SIX4-203ENST00000556952 ZNF496Q96IT1 587 aaPredicted RBP30.28■■■□□ 2.44
SIX4-203ENST00000556952 TRIM27P14373 513 aa30.28■■■□□ 2.44
SIX4-203ENST00000556952 SMARCC1Q92922 1105 aaPredicted RBP30.28■■■□□ 2.44
SIX4-203ENST00000556952 CRBNQ96SW2 442 aa30.27■■■□□ 2.44
SIX4-203ENST00000556952 ANO8Q9HCE9 1232 aaPredicted RBP30.27■■■□□ 2.44
SIX4-203ENST00000556952 PTPRCP08575 1304 aa30.26■■■□□ 2.44
SIX4-203ENST00000556952 SLC4A2P04920 1241 aa30.26■■■□□ 2.43
SIX4-203ENST00000556952 FTSJ3Q8IY81 847 aaKnown RBP30.26■■■□□ 2.43
SIX4-203ENST00000556952 DZIP1LQ8IYY4 767 aaKnown RBP30.26■■■□□ 2.43
SIX4-203ENST00000556952 SNRPA1P09661 255 aaKnown RBP30.25■■■□□ 2.43
SIX4-203ENST00000556952 SLC27A3Q5K4L6 730 aa30.25■■■□□ 2.43
SIX4-203ENST00000556952 CCNL1Q9UK58 526 aaPredicted RBP30.25■■■□□ 2.43
SIX4-203ENST00000556952 EXOC6Q8TAG9 804 aa30.24■■■□□ 2.43
SIX4-203ENST00000556952 API5Q9BZZ5 524 aaKnown RBP30.24■■■□□ 2.43
SIX4-203ENST00000556952 EIF2S2P20042 333 aaKnown RBP30.23■■■□□ 2.43
SIX4-203ENST00000556952 PANK1Q8TE04 598 aa30.23■■■□□ 2.43
SIX4-203ENST00000556952 TUBGCP6Q96RT7 1819 aa30.22■■■□□ 2.43
SIX4-203ENST00000556952 PPP4R2Q9NY27 417 aa30.22■■■□□ 2.43
SIX4-203ENST00000556952 ZNF831Q5JPB2 1677 aa30.22■■■□□ 2.43
SIX4-203ENST00000556952 PSDA5PKW4 1024 aaPredicted RBP30.21■■■□□ 2.43
SIX4-203ENST00000556952 NECTIN2Q92692 538 aa30.21■■■□□ 2.43
SIX4-203ENST00000556952 LOC102724428A0A0B4J2F2 783 aa30.2■■■□□ 2.43
SIX4-203ENST00000556952 RLBP1P12271 317 aa30.2■■■□□ 2.43
SIX4-203ENST00000556952 SIK1P57059 783 aa30.2■■■□□ 2.43
SIX4-203ENST00000556952 CLUAP1Q96AJ1 413 aa30.2■■■□□ 2.43
SIX4-203ENST00000556952 DBF4Q9UBU7 674 aaPredicted RBP30.2■■■□□ 2.43
SIX4-203ENST00000556952 TNNQ9UQP3 1299 aa30.2■■■□□ 2.43
SIX4-203ENST00000556952 R3HDM1Q15032 1099 aaKnown RBP30.2■■■□□ 2.42
SIX4-203ENST00000556952 NBPF14Q5TI25 921 aa30.2■■■□□ 2.42
SIX4-203ENST00000556952 SLC4A9Q96Q91 983 aa30.2■■■□□ 2.42
SIX4-203ENST00000556952 TJP1Q07157 1748 aa30.19■■■□□ 2.42
SIX4-203ENST00000556952 PRAMEF22A3QJZ6 481 aa30.19■■■□□ 2.42
SIX4-203ENST00000556952 COL5A3P25940 1745 aaPredicted RBP30.19■■■□□ 2.42
SIX4-203ENST00000556952 ABCC4O15439 1325 aa30.19■■■□□ 2.42
SIX4-203ENST00000556952 N4BP2Q86UW6 1770 aaPredicted RBP30.19■■■□□ 2.42
SIX4-203ENST00000556952 VSIG10Q8N0Z9 540 aa30.18■■■□□ 2.42
SIX4-203ENST00000556952 RBM42Q9BTD8 480 aaKnown RBP30.18■■■□□ 2.42
SIX4-203ENST00000556952 CHPF2Q9P2E5 772 aa30.18■■■□□ 2.42
SIX4-203ENST00000556952 C4BP0C0L5 1744 aa30.17■■■□□ 2.42
SIX4-203ENST00000556952 ZNF827Q17R98 1081 aa30.17■■■□□ 2.42
SIX4-203ENST00000556952 COG6Q9Y2V7 657 aa30.17■■■□□ 2.42
SIX4-203ENST00000556952 CICQ96RK0 1608 aaPredicted RBP30.17■■■□□ 2.42
SIX4-203ENST00000556952 PTCD1O75127 700 aaKnown RBP30.16■■■□□ 2.42
SIX4-203ENST00000556952 FLIIQ13045 1269 aa30.16■■■□□ 2.42
SIX4-203ENST00000556952 ITPK1Q13572 414 aa30.16■■■□□ 2.42
SIX4-203ENST00000556952 MVPQ14764 893 aaKnown RBP30.16■■■□□ 2.42
SIX4-203ENST00000556952 AAMPQ13685 434 aa30.15■■■□□ 2.42
SIX4-203ENST00000556952 G2E3Q7L622 706 aa30.15■■■□□ 2.42
SIX4-203ENST00000556952 ATP6V1AP38606 617 aa30.14■■■□□ 2.42
SIX4-203ENST00000556952 ERBB4Q15303 1308 aa30.14■■■□□ 2.42
SIX4-203ENST00000556952 SLC15A2Q16348 729 aa30.14■■■□□ 2.42
SIX4-203ENST00000556952 QSER1Q2KHR3 1735 aa30.14■■■□□ 2.42
SIX4-203ENST00000556952 DDX21Q9NR30 783 aaKnown RBP eCLIP30.14■■■□□ 2.42
SIX4-203ENST00000556952 STK32BQ9NY57 414 aa30.14■■■□□ 2.42
SIX4-203ENST00000556952 AKT1S1Q96B36 256 aa30.13■■■□□ 2.41
SIX4-203ENST00000556952 HYPKQ9NX55 129 aa30.13■■■□□ 2.41
SIX4-203ENST00000556952 TMEM57Q8N5G2 664 aa30.12■■■□□ 2.41
SIX4-203ENST00000556952 LINC00116Q8NCU8 138 aa30.12■■■□□ 2.41
SIX4-203ENST00000556952 TEX13AQ9BXU3 409 aaPredicted RBP30.12■■■□□ 2.41
SIX4-203ENST00000556952 USP16Q9Y5T5 823 aa30.12■■■□□ 2.41
SIX4-203ENST00000556952 CASZ1Q86V15 1759 aa30.12■■■□□ 2.41
SIX4-203ENST00000556952 PXDNLA1KZ92 1463 aa30.12■■■□□ 2.41
SIX4-203ENST00000556952 DDX19BQ9UMR2 479 aa30.11■■■□□ 2.41
SIX4-203ENST00000556952 FKBP5Q13451 457 aaPredicted RBP30.11■■■□□ 2.41
SIX4-203ENST00000556952 UBR3Q6ZT12 1888 aa30.11■■■□□ 2.41
SIX4-203ENST00000556952 ITPRIPQ8IWB1 547 aa30.1■■■□□ 2.41
SIX4-203ENST00000556952 MYH14Q7Z406 1995 aaKnown RBP30.1■■■□□ 2.41
SIX4-203ENST00000556952 PDIA6Q15084 440 aa30.09■■■□□ 2.41
SIX4-203ENST00000556952 PHAXQ9H814 394 aaKnown RBP30.08■■■□□ 2.41
SIX4-203ENST00000556952 PROSER3Q2NL68 480 aa30.07■■■□□ 2.4
SIX4-203ENST00000556952 INTS3Q68E01 1043 aaKnown RBP30.07■■■□□ 2.4
SIX4-203ENST00000556952 PDGFDQ9GZP0 370 aaPredicted RBP30.07■■■□□ 2.4
SIX4-203ENST00000556952 CHMP4BQ9H444 224 aaKnown RBP30.07■■■□□ 2.4
SIX4-203ENST00000556952 ANXA1P04083 346 aa30.05■■■□□ 2.4
SIX4-203ENST00000556952 CCDC136Q96JN2 1154 aa30.04■■■□□ 2.4
SIX4-203ENST00000556952 DNAJC10Q8IXB1 793 aa30.03■■■□□ 2.4
SIX4-203ENST00000556952 STARD3NLO95772 234 aa30.03■■■□□ 2.4
SIX4-203ENST00000556952 CCT4P50991 539 aaKnown RBP30.03■■■□□ 2.4
SIX4-203ENST00000556952 AMIGO3Q86WK7 504 aa30.03■■■□□ 2.4
SIX4-203ENST00000556952 TFCP2L1Q9NZI6 479 aa30.03■■■□□ 2.4
SIX4-203ENST00000556952 LRP10Q7Z4F1 713 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms