RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 PDZRN3Q9UPQ7 1066 aa23.01■■□□□ 1.27
CHGA-206ENST00000556876 KIF3CO14782 793 aa23■■□□□ 1.27
CHGA-206ENST00000556876 TOMM70O94826 608 aa23■■□□□ 1.27
CHGA-206ENST00000556876 COL15A1P39059 1388 aa23■■□□□ 1.27
CHGA-206ENST00000556876 SCN11AQ9UI33 1791 aa22.99■■□□□ 1.27
CHGA-206ENST00000556876 ZNF790Q6PG37 636 aa22.99■■□□□ 1.27
CHGA-206ENST00000556876 ZBTB1Q9Y2K1 713 aa22.99■■□□□ 1.27
CHGA-206ENST00000556876 MYH14Q7Z406 1995 aaKnown RBP22.99■■□□□ 1.27
CHGA-206ENST00000556876 NFIXQ14938 502 aa22.97■■□□□ 1.27
CHGA-206ENST00000556876 C9orf131Q5VYM1 1079 aa22.97■■□□□ 1.27
CHGA-206ENST00000556876 FMNL2Q96PY5 1086 aa22.97■■□□□ 1.27
CHGA-206ENST00000556876 KDM2BQ8NHM5 1336 aa22.97■■□□□ 1.27
CHGA-206ENST00000556876 SERPINB2P05120 415 aa22.96■■□□□ 1.27
CHGA-206ENST00000556876 CANXP27824 592 aaKnown RBP22.96■■□□□ 1.27
CHGA-206ENST00000556876 EIF5P55010 431 aaKnown RBP22.96■■□□□ 1.27
CHGA-206ENST00000556876 IL17REQ8NFR9 667 aa22.96■■□□□ 1.27
CHGA-206ENST00000556876 C16orf71Q8IYS4 520 aaPredicted RBP22.95■■□□□ 1.26
CHGA-206ENST00000556876 ZC3H4Q9UPT8 1303 aaKnown RBP22.95■■□□□ 1.26
CHGA-206ENST00000556876 IL6STP40189 918 aaPredicted RBP22.94■■□□□ 1.26
CHGA-206ENST00000556876 APLP1P51693 650 aa22.94■■□□□ 1.26
CHGA-206ENST00000556876 TJP1Q07157 1748 aa22.94■■□□□ 1.26
CHGA-206ENST00000556876 KCPQ6ZWJ8 1503 aa22.93■■□□□ 1.26
CHGA-206ENST00000556876 HEG1Q9ULI3 1381 aa22.93■■□□□ 1.26
CHGA-206ENST00000556876 H0YIN7 160 aa22.93■■□□□ 1.26
CHGA-206ENST00000556876 CHRNA5P30532 468 aa22.93■■□□□ 1.26
CHGA-206ENST00000556876 RTF1Q92541 710 aaKnown RBP22.93■■□□□ 1.26
CHGA-206ENST00000556876 ZNF496Q96IT1 587 aaPredicted RBP22.93■■□□□ 1.26
CHGA-206ENST00000556876 TTLL6Q8N841 843 aa22.92■■□□□ 1.26
CHGA-206ENST00000556876 BTBD11A6QL63 1104 aa22.91■■□□□ 1.26
CHGA-206ENST00000556876 CNGB1Q14028 1251 aaPredicted RBP22.91■■□□□ 1.26
CHGA-206ENST00000556876 BCL2L12Q9HB09 334 aa22.91■■□□□ 1.26
CHGA-206ENST00000556876 RNF181Q9P0P0 153 aa22.91■■□□□ 1.26
CHGA-206ENST00000556876 COL3A1P02461 1466 aaPredicted RBP22.91■■□□□ 1.26
CHGA-206ENST00000556876 ADAMTS7Q9UKP4 1686 aa22.9■■□□□ 1.26
CHGA-206ENST00000556876 CEMIPQ8WUJ3 1361 aa22.9■■□□□ 1.26
CHGA-206ENST00000556876 HTATSF1O43719 755 aaKnown RBP22.9■■□□□ 1.26
CHGA-206ENST00000556876 PRKAR2BP31323 418 aa22.9■■□□□ 1.26
CHGA-206ENST00000556876 PDE6BP35913 854 aa22.9■■□□□ 1.26
CHGA-206ENST00000556876 RBM46Q8TBY0 533 aaKnown RBP22.9■■□□□ 1.26
CHGA-206ENST00000556876 RSPH6AQ9H0K4 717 aa22.9■■□□□ 1.26
CHGA-206ENST00000556876 KIAA1551Q9HCM1 1747 aa22.9■■□□□ 1.26
CHGA-206ENST00000556876 N4BP2Q86UW6 1770 aaPredicted RBP22.89■■□□□ 1.26
CHGA-206ENST00000556876 NEFMP07197 916 aa22.88■■□□□ 1.25
CHGA-206ENST00000556876 U2AF1L5P0DN76 240 aaPredicted RBP22.88■■□□□ 1.25
CHGA-206ENST00000556876 LMNB1P20700 586 aa22.88■■□□□ 1.25
CHGA-206ENST00000556876 U2AF1Q01081 240 aaKnown RBP eCLIP22.88■■□□□ 1.25
CHGA-206ENST00000556876 FSTL1Q12841 308 aa22.88■■□□□ 1.25
CHGA-206ENST00000556876 C2CD5Q86YS7 1000 aa22.88■■□□□ 1.25
CHGA-206ENST00000556876 BRIP1Q9BX63 1249 aa22.88■■□□□ 1.25
CHGA-206ENST00000556876 PHACTR3Q96KR7 559 aa22.86■■□□□ 1.25
CHGA-206ENST00000556876 SETDB2Q96T68 719 aa22.86■■□□□ 1.25
CHGA-206ENST00000556876 NMRK2Q9NPI5 230 aa22.86■■□□□ 1.25
CHGA-206ENST00000556876 RGL2O15211 777 aa22.85■■□□□ 1.25
CHGA-206ENST00000556876 PPP2R1AP30153 589 aa22.85■■□□□ 1.25
CHGA-206ENST00000556876 CLEC4GQ6UXB4 293 aa22.85■■□□□ 1.25
CHGA-206ENST00000556876 BICDL1Q6ZP65 573 aa22.85■■□□□ 1.25
CHGA-206ENST00000556876 CARMIL3Q8ND23 1372 aa22.85■■□□□ 1.25
CHGA-206ENST00000556876 NPHP1O15259 732 aa22.84■■□□□ 1.25
CHGA-206ENST00000556876 SNRPA1P09661 255 aaKnown RBP22.84■■□□□ 1.25
CHGA-206ENST00000556876 ZNF330Q9Y3S2 320 aaPredicted RBP22.84■■□□□ 1.25
CHGA-206ENST00000556876 ARFGEF1Q9Y6D6 1849 aa22.83■■□□□ 1.25
CHGA-206ENST00000556876 TBC1D9BQ66K14 1250 aa22.83■■□□□ 1.25
CHGA-206ENST00000556876 TBC1D2BQ9UPU7 963 aa22.83■■□□□ 1.25
CHGA-206ENST00000556876 ZNF652Q9Y2D9 606 aa22.83■■□□□ 1.25
CHGA-206ENST00000556876 PNNQ9H307 717 aaKnown RBP22.82■■□□□ 1.24
CHGA-206ENST00000556876 BRCA1P38398 1863 aaKnown RBP22.81■■□□□ 1.24
CHGA-206ENST00000556876 A1BGP04217 495 aa22.81■■□□□ 1.24
CHGA-206ENST00000556876 ST5P78524 1137 aa22.81■■□□□ 1.24
CHGA-206ENST00000556876 SOGA3Q5TF21 947 aa22.81■■□□□ 1.24
CHGA-206ENST00000556876 CNBD1Q8NA66 436 aa22.81■■□□□ 1.24
CHGA-206ENST00000556876 CNKSR1Q969H4 720 aa22.81■■□□□ 1.24
CHGA-206ENST00000556876 DPY19L2Q6NUT2 758 aa22.8■■□□□ 1.24
CHGA-206ENST00000556876 DZIP3Q86Y13 1208 aaKnown RBP22.8■■□□□ 1.24
CHGA-206ENST00000556876 ZNF622Q969S3 477 aaKnown RBP eCLIP22.8■■□□□ 1.24
CHGA-206ENST00000556876 UBR2Q8IWV8 1755 aa22.79■■□□□ 1.24
CHGA-206ENST00000556876 GLTPD2A6NH11 291 aa22.79■■□□□ 1.24
CHGA-206ENST00000556876 CAMTA2O94983 1202 aa22.79■■□□□ 1.24
CHGA-206ENST00000556876 VEGFAP15692 232 aaPredicted RBP22.79■■□□□ 1.24
CHGA-206ENST00000556876 TAF7Q15545 349 aaPredicted RBP22.79■■□□□ 1.24
CHGA-206ENST00000556876 PRR5LQ6MZQ0 368 aa22.79■■□□□ 1.24
CHGA-206ENST00000556876 PNISRQ8TF01 805 aaKnown RBP22.79■■□□□ 1.24
CHGA-206ENST00000556876 RRAGCQ9HB90 399 aa22.79■■□□□ 1.24
CHGA-206ENST00000556876 IFFO2Q5TF58 517 aa22.78■■□□□ 1.24
CHGA-206ENST00000556876 SMC1BQ8NDV3 1235 aa22.78■■□□□ 1.24
CHGA-206ENST00000556876 NRXN2Q9P2S2 1712 aa22.77■■□□□ 1.24
CHGA-206ENST00000556876 STYK1Q6J9G0 422 aa22.77■■□□□ 1.24
CHGA-206ENST00000556876 USP16Q9Y5T5 823 aa22.77■■□□□ 1.24
CHGA-206ENST00000556876 KCNQ3O43525 872 aa22.75■■□□□ 1.23
CHGA-206ENST00000556876 RASSF7Q02833 373 aa22.75■■□□□ 1.23
CHGA-206ENST00000556876 TPTE2Q6XPS3 522 aa22.75■■□□□ 1.23
CHGA-206ENST00000556876 MCM10Q7L590 875 aa22.75■■□□□ 1.23
CHGA-206ENST00000556876 MASTLQ96GX5 879 aa22.75■■□□□ 1.23
CHGA-206ENST00000556876 NBPF5PQ86XG9 351 aaPredicted RBP22.74■■□□□ 1.23
CHGA-206ENST00000556876 DNAJC5GQ8N7S2 189 aa22.74■■□□□ 1.23
CHGA-206ENST00000556876 LTBP3Q9NS15 1303 aa22.74■■□□□ 1.23
CHGA-206ENST00000556876 SRGNP10124 158 aa22.73■■□□□ 1.23
CHGA-206ENST00000556876 NFKBIEO00221 500 aa22.72■■□□□ 1.23
CHGA-206ENST00000556876 C21orf2O43822 256 aa22.72■■□□□ 1.23
CHGA-206ENST00000556876 TAOK3Q9H2K8 898 aa22.71■■□□□ 1.23
CHGA-206ENST00000556876 ERFEQ4G0M1 354 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms