RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 NARFQ9UHQ1 456 aa14.3□□□□□ -0.12
XRCC3-216ENST00000556682 ZBTB1Q9Y2K1 713 aa14.3□□□□□ -0.12
XRCC3-216ENST00000556682 MAPK8IP3Q9UPT6 1336 aa14.3□□□□□ -0.12
XRCC3-216ENST00000556682 COL5A3P25940 1745 aaPredicted RBP14.29□□□□□ -0.12
XRCC3-216ENST00000556682 FKBP8Q14318 412 aa14.29□□□□□ -0.12
XRCC3-216ENST00000556682 KCPQ6ZWJ8 1503 aa14.29□□□□□ -0.12
XRCC3-216ENST00000556682 COL15A1P39059 1388 aa14.28□□□□□ -0.12
XRCC3-216ENST00000556682 TAF7Q15545 349 aaPredicted RBP14.28□□□□□ -0.12
XRCC3-216ENST00000556682 USPL1Q5W0Q7 1092 aa14.28□□□□□ -0.12
XRCC3-216ENST00000556682 MYBBP1AQ9BQG0 1328 aaKnown RBP14.28□□□□□ -0.12
XRCC3-216ENST00000556682 CICQ96RK0 1608 aaPredicted RBP14.27□□□□□ -0.12
XRCC3-216ENST00000556682 SNRPA1P09661 255 aaKnown RBP14.27□□□□□ -0.13
XRCC3-216ENST00000556682 DCTN1Q14203 1278 aa14.27□□□□□ -0.13
XRCC3-216ENST00000556682 NFE2L2Q16236 605 aa14.27□□□□□ -0.13
XRCC3-216ENST00000556682 ZNF784Q8NCA9 323 aaPredicted RBP14.27□□□□□ -0.13
XRCC3-216ENST00000556682 PNISRQ8TF01 805 aaKnown RBP14.27□□□□□ -0.13
XRCC3-216ENST00000556682 PLEKHF1Q96S99 279 aa14.27□□□□□ -0.13
XRCC3-216ENST00000556682 MYH14Q7Z406 1995 aaKnown RBP14.27□□□□□ -0.13
XRCC3-216ENST00000556682 KCNQ3O43525 872 aa14.26□□□□□ -0.13
XRCC3-216ENST00000556682 TM4SF1P30408 202 aa14.26□□□□□ -0.13
XRCC3-216ENST00000556682 IL6STP40189 918 aaPredicted RBP14.26□□□□□ -0.13
XRCC3-216ENST00000556682 EIF5P55010 431 aaKnown RBP14.26□□□□□ -0.13
XRCC3-216ENST00000556682 ZNF330Q9Y3S2 320 aaPredicted RBP14.26□□□□□ -0.13
XRCC3-216ENST00000556682 TJP1Q07157 1748 aa14.26□□□□□ -0.13
XRCC3-216ENST00000556682 A0A0G2JLW4 131 aa14.25□□□□□ -0.13
XRCC3-216ENST00000556682 C10orf71Q711Q0 1435 aa14.24□□□□□ -0.13
XRCC3-216ENST00000556682 POLRMTO00411 1230 aaKnown RBP14.24□□□□□ -0.13
XRCC3-216ENST00000556682 DPEP1P16444 411 aa14.24□□□□□ -0.13
XRCC3-216ENST00000556682 DDR1Q08345 913 aa14.24□□□□□ -0.13
XRCC3-216ENST00000556682 NFIXQ14938 502 aa14.24□□□□□ -0.13
XRCC3-216ENST00000556682 WWC3Q9ULE0 1092 aa14.24□□□□□ -0.13
XRCC3-216ENST00000556682 A1BGP04217 495 aa14.23□□□□□ -0.13
XRCC3-216ENST00000556682 WDR43Q15061 677 aaKnown RBP eCLIP14.23□□□□□ -0.13
XRCC3-216ENST00000556682 PIM2Q9P1W9 311 aa14.23□□□□□ -0.13
XRCC3-216ENST00000556682 BCS1LQ9Y276 419 aa14.23□□□□□ -0.13
XRCC3-216ENST00000556682 USP16Q9Y5T5 823 aa14.23□□□□□ -0.13
XRCC3-216ENST00000556682 SERPINB2P05120 415 aa14.22□□□□□ -0.13
XRCC3-216ENST00000556682 LMOD3Q0VAK6 560 aa14.22□□□□□ -0.13
XRCC3-216ENST00000556682 TBC1D2BQ9UPU7 963 aa14.22□□□□□ -0.13
XRCC3-216ENST00000556682 VIRMAQ69YN4 1812 aaKnown RBP14.22□□□□□ -0.13
XRCC3-216ENST00000556682 UBR2Q8IWV8 1755 aa14.22□□□□□ -0.13
XRCC3-216ENST00000556682 C4AP0C0L4 1744 aa14.21□□□□□ -0.13
XRCC3-216ENST00000556682 PXDNLA1KZ92 1463 aa14.21□□□□□ -0.13
XRCC3-216ENST00000556682 RIPK4P57078 832 aa14.21□□□□□ -0.13
XRCC3-216ENST00000556682 BICDL1Q6ZP65 573 aa14.21□□□□□ -0.13
XRCC3-216ENST00000556682 BCL2L12Q9HB09 334 aa14.21□□□□□ -0.13
XRCC3-216ENST00000556682 RNF216Q9NWF9 866 aaPredicted RBP14.21□□□□□ -0.13
XRCC3-216ENST00000556682 MIS18AQ9NYP9 233 aa14.21□□□□□ -0.13
XRCC3-216ENST00000556682 CHD4Q14839 1912 aa14.21□□□□□ -0.14
XRCC3-216ENST00000556682 DALRD3Q5D0E6 543 aaKnown RBP14.2□□□□□ -0.14
XRCC3-216ENST00000556682 DZIP3Q86Y13 1208 aaKnown RBP14.2□□□□□ -0.14
XRCC3-216ENST00000556682 PRKRIP1Q9H875 184 aaPredicted RBP14.2□□□□□ -0.14
XRCC3-216ENST00000556682 PRAMEF22A3QJZ6 481 aa14.19□□□□□ -0.14
XRCC3-216ENST00000556682 NPHP1O15259 732 aa14.19□□□□□ -0.14
XRCC3-216ENST00000556682 ARHGAP27Q6ZUM4 889 aa14.19□□□□□ -0.14
XRCC3-216ENST00000556682 SETDB2Q96T68 719 aa14.19□□□□□ -0.14
XRCC3-216ENST00000556682 ZNF652Q9Y2D9 606 aa14.19□□□□□ -0.14
XRCC3-216ENST00000556682 SIPA1L3O60292 1781 aaPredicted RBP14.19□□□□□ -0.14
XRCC3-216ENST00000556682 CAMTA2O94983 1202 aa14.18□□□□□ -0.14
XRCC3-216ENST00000556682 KCNA3P22001 575 aa14.18□□□□□ -0.14
XRCC3-216ENST00000556682 TMPOP42166 694 aaKnown RBP14.18□□□□□ -0.14
XRCC3-216ENST00000556682 TBC1D9BQ66K14 1250 aa14.18□□□□□ -0.14
XRCC3-216ENST00000556682 CLEC4GQ6UXB4 293 aa14.18□□□□□ -0.14
XRCC3-216ENST00000556682 RUNDC1Q96C34 613 aa14.18□□□□□ -0.14
XRCC3-216ENST00000556682 THUMPD2Q9BTF0 503 aaKnown RBP14.18□□□□□ -0.14
XRCC3-216ENST00000556682 BABAM1Q9NWV8 329 aa14.18□□□□□ -0.14
XRCC3-216ENST00000556682 PDZRN3Q9UPQ7 1066 aa14.18□□□□□ -0.14
XRCC3-216ENST00000556682 H0YIN7 160 aa14.17□□□□□ -0.14
XRCC3-216ENST00000556682 GIGYF1O75420 1035 aaPredicted RBP14.17□□□□□ -0.14
XRCC3-216ENST00000556682 CHRNA5P30532 468 aa14.17□□□□□ -0.14
XRCC3-216ENST00000556682 HOXD11P31277 338 aaPredicted RBP14.17□□□□□ -0.14
XRCC3-216ENST00000556682 EIF4A1P60842 406 aaKnown RBP14.17□□□□□ -0.14
XRCC3-216ENST00000556682 TSPYL4Q9UJ04 414 aa14.17□□□□□ -0.14
XRCC3-216ENST00000556682 UTRNP46939 3433 aa14.17□□□□□ -0.14
XRCC3-216ENST00000556682 RGL2O15211 777 aa14.16□□□□□ -0.14
XRCC3-216ENST00000556682 PIP4K2AP48426 406 aaPredicted RBP14.16□□□□□ -0.14
XRCC3-216ENST00000556682 NEUROD2Q15784 382 aa14.16□□□□□ -0.14
XRCC3-216ENST00000556682 CCDC146Q8IYE0 955 aa14.16□□□□□ -0.14
XRCC3-216ENST00000556682 ADAMTS8Q9UP79 889 aa14.16□□□□□ -0.14
XRCC3-216ENST00000556682 CARMIL3Q8ND23 1372 aa14.16□□□□□ -0.14
XRCC3-216ENST00000556682 KIF13BQ9NQT8 1826 aa14.15□□□□□ -0.14
XRCC3-216ENST00000556682 PDE6BP35913 854 aa14.15□□□□□ -0.14
XRCC3-216ENST00000556682 ST5P78524 1137 aa14.15□□□□□ -0.14
XRCC3-216ENST00000556682 C2CD5Q86YS7 1000 aa14.15□□□□□ -0.14
XRCC3-216ENST00000556682 BRIP1Q9BX63 1249 aa14.15□□□□□ -0.14
XRCC3-216ENST00000556682 GPBP1L1Q9HC44 474 aaPredicted RBP14.15□□□□□ -0.14
XRCC3-216ENST00000556682 NBPF26B4DH59 902 aa14.14□□□□□ -0.15
XRCC3-216ENST00000556682 NBPF10Q6P3W6 841 aaKnown RBP14.14□□□□□ -0.15
XRCC3-216ENST00000556682 NBPF15Q8N660 670 aa14.14□□□□□ -0.15
XRCC3-216ENST00000556682 TTLL6Q8N841 843 aa14.14□□□□□ -0.15
XRCC3-216ENST00000556682 CNBD1Q8NA66 436 aa14.14□□□□□ -0.15
XRCC3-216ENST00000556682 RRP7AQ9Y3A4 280 aaKnown RBP14.14□□□□□ -0.15
XRCC3-216ENST00000556682 PRR5LQ6MZQ0 368 aa14.13□□□□□ -0.15
XRCC3-216ENST00000556682 NBPF5PQ86XG9 351 aaPredicted RBP14.13□□□□□ -0.15
XRCC3-216ENST00000556682 ATP10DQ9P241 1426 aa14.13□□□□□ -0.15
XRCC3-216ENST00000556682 TPTE2Q6XPS3 522 aa14.12□□□□□ -0.15
XRCC3-216ENST00000556682 KIF6Q6ZMV9 814 aa14.12□□□□□ -0.15
XRCC3-216ENST00000556682 NGEFQ8N5V2 710 aa14.12□□□□□ -0.15
XRCC3-216ENST00000556682 NIP7Q9Y221 180 aaKnown RBP eCLIP14.12□□□□□ -0.15
XRCC3-216ENST00000556682 GOLGB1Q14789 3259 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms