RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ZNF594Q96JF6 807 aaPredicted RBP8.39□□□□□ -1.07
SRP54-211ENST00000556445 RASA1P20936 1047 aa8.38□□□□□ -1.07
SRP54-211ENST00000556445 LMOD1P29536 600 aaPredicted RBP8.38□□□□□ -1.07
SRP54-211ENST00000556445 ZDHHC1Q8WTX9 485 aa8.38□□□□□ -1.07
SRP54-211ENST00000556445 RUBCNLQ9H714 662 aa8.38□□□□□ -1.07
SRP54-211ENST00000556445 SFI1A8K8P3 1242 aa8.37□□□□□ -1.07
SRP54-211ENST00000556445 M0R2N6 131 aa8.37□□□□□ -1.07
SRP54-211ENST00000556445 SLURP2P0DP57 97 aa8.37□□□□□ -1.07
SRP54-211ENST00000556445 CRTC2Q53ET0 693 aaPredicted RBP8.37□□□□□ -1.07
SRP54-211ENST00000556445 CRISPLD1Q9H336 500 aa8.37□□□□□ -1.07
SRP54-211ENST00000556445 PTK7Q13308 1070 aa8.36□□□□□ -1.07
SRP54-211ENST00000556445 LBRQ14739 615 aaKnown RBP8.36□□□□□ -1.07
SRP54-211ENST00000556445 TBCELQ5QJ74 424 aa8.36□□□□□ -1.07
SRP54-211ENST00000556445 FOXR1Q6PIV2 292 aa8.36□□□□□ -1.07
SRP54-211ENST00000556445 SLC9A9Q8IVB4 645 aa8.36□□□□□ -1.07
SRP54-211ENST00000556445 C1orf216Q8TAB5 229 aa8.36□□□□□ -1.07
SRP54-211ENST00000556445 CABP1Q9NZU7 370 aa8.36□□□□□ -1.07
SRP54-211ENST00000556445 TEAD4Q15561 434 aa8.35□□□□□ -1.07
SRP54-211ENST00000556445 LARP1Q6PKG0 1096 aaKnown RBP8.35□□□□□ -1.07
SRP54-211ENST00000556445 TSEN2Q8NCE0 465 aaKnown RBP8.35□□□□□ -1.07
SRP54-211ENST00000556445 AIDAQ96BJ3 306 aa8.35□□□□□ -1.07
SRP54-211ENST00000556445 VRTNQ9H8Y1 702 aa8.35□□□□□ -1.07
SRP54-211ENST00000556445 ZDHHC3Q9NYG2 299 aa8.35□□□□□ -1.07
SRP54-211ENST00000556445 PARP3Q9Y6F1 533 aa8.35□□□□□ -1.07
SRP54-211ENST00000556445 FAM196BA6NMK8 535 aa8.34□□□□□ -1.07
SRP54-211ENST00000556445 CSB-PGBD3P0DP91 1061 aa8.34□□□□□ -1.07
SRP54-211ENST00000556445 NBPF1Q3BBV0 1214 aa8.34□□□□□ -1.07
SRP54-211ENST00000556445 PGBD3Q8N328 593 aa8.34□□□□□ -1.07
SRP54-211ENST00000556445 TRERF1Q96PN7 1200 aa8.34□□□□□ -1.07
SRP54-211ENST00000556445 TSPAN10Q9H1Z9 355 aaPredicted RBP8.34□□□□□ -1.07
SRP54-211ENST00000556445 MBIPQ9NS73 344 aa8.34□□□□□ -1.07
SRP54-211ENST00000556445 USP17L15C9J2P7 530 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 USP17L10C9JJH3 530 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 USP17L13C9JLJ4 530 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 USP17L12C9JPN9 530 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 USP17L11C9JVI0 530 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 USP17L21D6R901 530 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 USP17L18D6R9N7 530 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 USP17L22D6RA61 530 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 USP17L17D6RBQ6 530 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 USP17L19D6RCP7 530 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 USP17L20D6RJB6 530 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 ADAMTS2O95450 1211 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 TXLNAP40222 546 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 SEC13P55735 322 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 SRSF11Q05519 484 aaKnown RBP8.33□□□□□ -1.08
SRP54-211ENST00000556445 USP17L24Q0WX57 530 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 EFHC2Q5JST6 749 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 POTEAQ6S8J7 498 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 WHAMMQ8TF30 809 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 L3MBTL2Q969R5 705 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 CFHR5Q9BXR6 569 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 NDFIP2Q9NV92 336 aa8.33□□□□□ -1.08
SRP54-211ENST00000556445 EML1O00423 815 aa8.32□□□□□ -1.08
SRP54-211ENST00000556445 NOS2P35228 1153 aa8.32□□□□□ -1.08
SRP54-211ENST00000556445 DPYDQ12882 1025 aa8.32□□□□□ -1.08
SRP54-211ENST00000556445 SH3PXD2AQ5TCZ1 1133 aa8.32□□□□□ -1.08
SRP54-211ENST00000556445 ZNF385CQ66K41 422 aaPredicted RBP8.32□□□□□ -1.08
SRP54-211ENST00000556445 A0A1W2PNR3 127 aa8.31□□□□□ -1.08
SRP54-211ENST00000556445 C21orf2O43822 256 aa8.31□□□□□ -1.08
SRP54-211ENST00000556445 TATP17735 454 aaPredicted RBP8.31□□□□□ -1.08
SRP54-211ENST00000556445 PSMA6P60900 246 aaKnown RBP8.31□□□□□ -1.08
SRP54-211ENST00000556445 NLRP8Q86W28 1048 aa8.31□□□□□ -1.08
SRP54-211ENST00000556445 ANKMY2Q8IV38 441 aa8.31□□□□□ -1.08
SRP54-211ENST00000556445 C7orf43Q8WVR3 580 aa8.31□□□□□ -1.08
SRP54-211ENST00000556445 ZIC5Q96T25 663 aa8.31□□□□□ -1.08
SRP54-211ENST00000556445 RBM19Q9Y4C8 960 aaKnown RBP8.31□□□□□ -1.08
SRP54-211ENST00000556445 IGF1RP08069 1367 aa8.31□□□□□ -1.08
SRP54-211ENST00000556445 SERTM1A2A2V5 107 aa8.3□□□□□ -1.08
SRP54-211ENST00000556445 HIRAP54198 1017 aaPredicted RBP8.3□□□□□ -1.08
SRP54-211ENST00000556445 ZCCHC2Q9C0B9 1178 aaKnown RBP8.3□□□□□ -1.08
SRP54-211ENST00000556445 FAM181BA6NEQ2 426 aa8.29□□□□□ -1.08
SRP54-211ENST00000556445 BNIP3LO60238 219 aa8.29□□□□□ -1.08
SRP54-211ENST00000556445 MX2P20592 715 aa8.29□□□□□ -1.08
SRP54-211ENST00000556445 RFX1P22670 979 aa8.29□□□□□ -1.08
SRP54-211ENST00000556445 SRPK2P78362 688 aaKnown RBP8.29□□□□□ -1.08
SRP54-211ENST00000556445 CDCA8Q53HL2 280 aa8.29□□□□□ -1.08
SRP54-211ENST00000556445 ARSJQ5FYB0 599 aaPredicted RBP8.29□□□□□ -1.08
SRP54-211ENST00000556445 ABHD17AQ96GS6 310 aa8.29□□□□□ -1.08
SRP54-211ENST00000556445 HCN2Q9UL51 889 aa8.29□□□□□ -1.08
SRP54-211ENST00000556445 ATXN7L1Q9ULK2 861 aaPredicted RBP8.29□□□□□ -1.08
SRP54-211ENST00000556445 ZNF232Q9UNY5 417 aa8.29□□□□□ -1.08
SRP54-211ENST00000556445 PHF24Q9UPV7 400 aa8.29□□□□□ -1.08
SRP54-211ENST00000556445 ARID3CA6NKF2 412 aa8.28□□□□□ -1.08
SRP54-211ENST00000556445 FIGNL1Q6PIW4 674 aa8.28□□□□□ -1.08
SRP54-211ENST00000556445 LYPD4Q6UWN0 246 aa8.28□□□□□ -1.08
SRP54-211ENST00000556445 KLRG1Q96E93 195 aa8.28□□□□□ -1.08
SRP54-211ENST00000556445 PCDHGC4Q9Y5F7 938 aa8.28□□□□□ -1.08
SRP54-211ENST00000556445 UNC13AQ9UPW8 1703 aa8.28□□□□□ -1.08
SRP54-211ENST00000556445 PPP1R12BO60237 982 aaPredicted RBP8.27□□□□□ -1.09
SRP54-211ENST00000556445 ARHGEF15O94989 841 aa8.27□□□□□ -1.09
SRP54-211ENST00000556445 STAG2Q8N3U4 1231 aa8.27□□□□□ -1.09
SRP54-211ENST00000556445 RSF1Q96T23 1441 aaPredicted RBP8.27□□□□□ -1.09
SRP54-211ENST00000556445 ATAD2Q6PL18 1390 aa8.26□□□□□ -1.09
SRP54-211ENST00000556445 C2CD2LO14523 706 aa8.26□□□□□ -1.09
SRP54-211ENST00000556445 ATXN7O15265 892 aaPredicted RBP8.26□□□□□ -1.09
SRP54-211ENST00000556445 LGR5O75473 907 aa8.26□□□□□ -1.09
SRP54-211ENST00000556445 CELA2BP08218 269 aaPredicted RBP8.26□□□□□ -1.09
SRP54-211ENST00000556445 C1orf53Q5VUE5 145 aa8.26□□□□□ -1.09
SRP54-211ENST00000556445 BICDL1Q6ZP65 573 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms