RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 PARP3Q9Y6F1 533 aa17.99■□□□□ 0.47
TGFB3-204ENST00000556285 WDR90Q96KV7 1748 aa17.98■□□□□ 0.47
TGFB3-204ENST00000556285 CHRNA5P30532 468 aa17.98■□□□□ 0.47
TGFB3-204ENST00000556285 CYP19A1P11511 503 aaPredicted RBP17.97■□□□□ 0.47
TGFB3-204ENST00000556285 NPC1L1Q9UHC9 1359 aa17.96■□□□□ 0.47
TGFB3-204ENST00000556285 POLRMTO00411 1230 aaKnown RBP17.96■□□□□ 0.47
TGFB3-204ENST00000556285 U2SURPO15042 1029 aaKnown RBP17.96■□□□□ 0.47
TGFB3-204ENST00000556285 CACNA1SQ13698 1873 aa17.96■□□□□ 0.47
TGFB3-204ENST00000556285 SOS1Q07889 1333 aaPredicted RBP17.96■□□□□ 0.46
TGFB3-204ENST00000556285 COL11A2P13942 1736 aaPredicted RBP17.95■□□□□ 0.46
TGFB3-204ENST00000556285 TM4SF1P30408 202 aa17.95■□□□□ 0.46
TGFB3-204ENST00000556285 USPL1Q5W0Q7 1092 aa17.95■□□□□ 0.46
TGFB3-204ENST00000556285 BCL2L12Q9HB09 334 aa17.95■□□□□ 0.46
TGFB3-204ENST00000556285 ZBTB1Q9Y2K1 713 aa17.95■□□□□ 0.46
TGFB3-204ENST00000556285 C9orf131Q5VYM1 1079 aa17.94■□□□□ 0.46
TGFB3-204ENST00000556285 TIAM2Q8IVF5 1701 aa17.94■□□□□ 0.46
TGFB3-204ENST00000556285 SCN7AQ01118 1682 aa17.93■□□□□ 0.46
TGFB3-204ENST00000556285 TNRC6CQ9HCJ0 1690 aaKnown RBP17.93■□□□□ 0.46
TGFB3-204ENST00000556285 CARMIL3Q8ND23 1372 aa17.93■□□□□ 0.46
TGFB3-204ENST00000556285 PRELPP51888 382 aa17.93■□□□□ 0.46
TGFB3-204ENST00000556285 IFFO2Q5TF58 517 aa17.93■□□□□ 0.46
TGFB3-204ENST00000556285 IL17REQ8NFR9 667 aa17.93■□□□□ 0.46
TGFB3-204ENST00000556285 COL15A1P39059 1388 aa17.92■□□□□ 0.46
TGFB3-204ENST00000556285 ZPR1O75312 459 aa17.91■□□□□ 0.46
TGFB3-204ENST00000556285 HTRA3P83110 453 aa17.91■□□□□ 0.46
TGFB3-204ENST00000556285 NFIXQ14938 502 aa17.91■□□□□ 0.46
TGFB3-204ENST00000556285 PIM2Q9P1W9 311 aa17.91■□□□□ 0.46
TGFB3-204ENST00000556285 CANXP27824 592 aaKnown RBP17.9■□□□□ 0.46
TGFB3-204ENST00000556285 RASSF7Q02833 373 aa17.9■□□□□ 0.46
TGFB3-204ENST00000556285 PHACTR3Q96KR7 559 aa17.9■□□□□ 0.46
TGFB3-204ENST00000556285 BCORQ6W2J9 1755 aa17.89■□□□□ 0.45
TGFB3-204ENST00000556285 VSIG10Q8N0Z9 540 aa17.89■□□□□ 0.45
TGFB3-204ENST00000556285 DNAJC5GQ8N7S2 189 aa17.89■□□□□ 0.45
TGFB3-204ENST00000556285 ZNF496Q96IT1 587 aaPredicted RBP17.89■□□□□ 0.45
TGFB3-204ENST00000556285 NARFQ9UHQ1 456 aa17.89■□□□□ 0.45
TGFB3-204ENST00000556285 GNAT3A8MTJ3 354 aa17.88■□□□□ 0.45
TGFB3-204ENST00000556285 TOMM70O94826 608 aa17.88■□□□□ 0.45
TGFB3-204ENST00000556285 DALRD3Q5D0E6 543 aaKnown RBP17.88■□□□□ 0.45
TGFB3-204ENST00000556285 DICER1Q9UPY3 1922 aaKnown RBP17.88■□□□□ 0.45
TGFB3-204ENST00000556285 FER1L6Q2WGJ9 1857 aa17.87■□□□□ 0.45
TGFB3-204ENST00000556285 TEFQ10587 303 aa17.87■□□□□ 0.45
TGFB3-204ENST00000556285 TTC5Q8N0Z6 440 aa17.87■□□□□ 0.45
TGFB3-204ENST00000556285 GAS2L2Q8NHY3 880 aa17.87■□□□□ 0.45
TGFB3-204ENST00000556285 RNF181Q9P0P0 153 aa17.87■□□□□ 0.45
TGFB3-204ENST00000556285 KCNQ3O43525 872 aa17.86■□□□□ 0.45
TGFB3-204ENST00000556285 PRKAR2BP31323 418 aa17.86■□□□□ 0.45
TGFB3-204ENST00000556285 ZNF790Q6PG37 636 aa17.86■□□□□ 0.45
TGFB3-204ENST00000556285 RSPH6AQ9H0K4 717 aa17.86■□□□□ 0.45
TGFB3-204ENST00000556285 EIF5P55010 431 aaKnown RBP17.85■□□□□ 0.45
TGFB3-204ENST00000556285 HEG1Q9ULI3 1381 aa17.85■□□□□ 0.45
TGFB3-204ENST00000556285 CEMIPQ8WUJ3 1361 aa17.84■□□□□ 0.45
TGFB3-204ENST00000556285 SERPINB2P05120 415 aa17.84■□□□□ 0.45
TGFB3-204ENST00000556285 PPP2R1AP30153 589 aa17.84■□□□□ 0.45
TGFB3-204ENST00000556285 CCDC24Q8N4L8 307 aa17.84■□□□□ 0.45
TGFB3-204ENST00000556285 RRAGCQ9HB90 399 aa17.84■□□□□ 0.45
TGFB3-204ENST00000556285 SLX4Q8IY92 1834 aa17.84■□□□□ 0.45
TGFB3-204ENST00000556285 ARFGEF2Q9Y6D5 1785 aa17.84■□□□□ 0.45
TGFB3-204ENST00000556285 STARD3NLO95772 234 aa17.83■□□□□ 0.44
TGFB3-204ENST00000556285 APLP1P51693 650 aa17.83■□□□□ 0.44
TGFB3-204ENST00000556285 BICDL1Q6ZP65 573 aa17.83■□□□□ 0.44
TGFB3-204ENST00000556285 CFAP53Q96M91 514 aa17.83■□□□□ 0.44
TGFB3-204ENST00000556285 A1BGP04217 495 aa17.82■□□□□ 0.44
TGFB3-204ENST00000556285 TBC1D9BQ66K14 1250 aa17.82■□□□□ 0.44
TGFB3-204ENST00000556285 U2AF1L5P0DN76 240 aaPredicted RBP17.81■□□□□ 0.44
TGFB3-204ENST00000556285 U2AF1Q01081 240 aaKnown RBP eCLIP17.81■□□□□ 0.44
TGFB3-204ENST00000556285 RBM46Q8TBY0 533 aaKnown RBP17.81■□□□□ 0.44
TGFB3-204ENST00000556285 TBC1D2BQ9UPU7 963 aa17.81■□□□□ 0.44
TGFB3-204ENST00000556285 ZNF330Q9Y3S2 320 aaPredicted RBP17.81■□□□□ 0.44
TGFB3-204ENST00000556285 DLG5Q8TDM6 1919 aa17.8■□□□□ 0.44
TGFB3-204ENST00000556285 PRAMEF22A3QJZ6 481 aa17.8■□□□□ 0.44
TGFB3-204ENST00000556285 NFKBIEO00221 500 aa17.8■□□□□ 0.44
TGFB3-204ENST00000556285 MCM10Q7L590 875 aa17.8■□□□□ 0.44
TGFB3-204ENST00000556285 FMNL2Q96PY5 1086 aa17.8■□□□□ 0.44
TGFB3-204ENST00000556285 BTBD11A6QL63 1104 aa17.79■□□□□ 0.44
TGFB3-204ENST00000556285 PIP4K2AP48426 406 aaPredicted RBP17.79■□□□□ 0.44
TGFB3-204ENST00000556285 DCTN1Q14203 1278 aa17.79■□□□□ 0.44
TGFB3-204ENST00000556285 C2CD5Q86YS7 1000 aa17.79■□□□□ 0.44
TGFB3-204ENST00000556285 PCNTO95613 3336 aa17.78■□□□□ 0.44
TGFB3-204ENST00000556285 A0A087WZG4 1122 aa17.78■□□□□ 0.44
TGFB3-204ENST00000556285 TEX13AQ9BXU3 409 aaPredicted RBP17.78■□□□□ 0.44
TGFB3-204ENST00000556285 NUDCQ9Y266 331 aa17.78■□□□□ 0.44
TGFB3-204ENST00000556285 USP16Q9Y5T5 823 aa17.78■□□□□ 0.44
TGFB3-204ENST00000556285 POTECB2RU33 542 aa17.76■□□□□ 0.43
TGFB3-204ENST00000556285 IL6STP40189 918 aaPredicted RBP17.76■□□□□ 0.43
TGFB3-204ENST00000556285 PRR5LQ6MZQ0 368 aa17.76■□□□□ 0.43
TGFB3-204ENST00000556285 ZNF219Q9P2Y4 722 aaPredicted RBP17.76■□□□□ 0.43
TGFB3-204ENST00000556285 KDM2BQ8NHM5 1336 aa17.75■□□□□ 0.43
TGFB3-204ENST00000556285 CAMTA2O94983 1202 aa17.75■□□□□ 0.43
TGFB3-204ENST00000556285 TTLL6Q8N841 843 aa17.75■□□□□ 0.43
TGFB3-204ENST00000556285 H0YIN7 160 aa17.74■□□□□ 0.43
TGFB3-204ENST00000556285 LMNB1P20700 586 aa17.74■□□□□ 0.43
TGFB3-204ENST00000556285 C16orf71Q8IYS4 520 aaPredicted RBP17.74■□□□□ 0.43
TGFB3-204ENST00000556285 LAMB4A4D0S4 1761 aa17.74■□□□□ 0.43
TGFB3-204ENST00000556285 GLTPD2A6NH11 291 aa17.73■□□□□ 0.43
TGFB3-204ENST00000556285 FSTL1Q12841 308 aa17.73■□□□□ 0.43
TGFB3-204ENST00000556285 RTF1Q92541 710 aaKnown RBP17.73■□□□□ 0.43
TGFB3-204ENST00000556285 KLRG1Q96E93 195 aa17.73■□□□□ 0.43
TGFB3-204ENST00000556285 C21orf2O43822 256 aa17.72■□□□□ 0.43
TGFB3-204ENST00000556285 DZIP3Q86Y13 1208 aaKnown RBP17.72■□□□□ 0.43
TGFB3-204ENST00000556285 MIS18AQ9NYP9 233 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms