RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 ZNF467Q7Z7K2 595 aaPredicted RBP13□□□□□ -0.33
MTHFD1-213ENST00000556284 KCNQ3O43525 872 aa12.99□□□□□ -0.33
MTHFD1-213ENST00000556284 CT47B1P0C2W7 299 aaPredicted RBP12.99□□□□□ -0.33
MTHFD1-213ENST00000556284 KIF12Q96FN5 646 aa12.99□□□□□ -0.33
MTHFD1-213ENST00000556284 FMNL2Q96PY5 1086 aa12.99□□□□□ -0.33
MTHFD1-213ENST00000556284 ATG3Q9NT62 314 aa12.99□□□□□ -0.33
MTHFD1-213ENST00000556284 ASAP1Q9ULH1 1129 aa12.99□□□□□ -0.33
MTHFD1-213ENST00000556284 BRWD3Q6RI45 1802 aa12.99□□□□□ -0.33
MTHFD1-213ENST00000556284 SOS1Q07889 1333 aaPredicted RBP12.98□□□□□ -0.33
MTHFD1-213ENST00000556284 EXOSC9Q06265 439 aaKnown RBP12.98□□□□□ -0.33
MTHFD1-213ENST00000556284 CHMP4AQ9BY43 222 aa12.98□□□□□ -0.33
MTHFD1-213ENST00000556284 TOGARAM1Q9Y4F4 1720 aa12.98□□□□□ -0.33
MTHFD1-213ENST00000556284 TRIM37O94972 964 aa12.97□□□□□ -0.33
MTHFD1-213ENST00000556284 HOXB7P09629 217 aa12.97□□□□□ -0.33
MTHFD1-213ENST00000556284 ZNF496Q96IT1 587 aaPredicted RBP12.97□□□□□ -0.33
MTHFD1-213ENST00000556284 PCDHB13Q9Y5F0 798 aa12.97□□□□□ -0.33
MTHFD1-213ENST00000556284 SIPA1L3O60292 1781 aaPredicted RBP12.97□□□□□ -0.33
MTHFD1-213ENST00000556284 HEG1Q9ULI3 1381 aa12.96□□□□□ -0.33
MTHFD1-213ENST00000556284 MAP3K13O43283 966 aa12.96□□□□□ -0.33
MTHFD1-213ENST00000556284 GIGYF1O75420 1035 aaPredicted RBP12.96□□□□□ -0.33
MTHFD1-213ENST00000556284 CENPBP07199 599 aaPredicted RBP12.96□□□□□ -0.33
MTHFD1-213ENST00000556284 SNRPA1P09661 255 aaKnown RBP12.96□□□□□ -0.33
MTHFD1-213ENST00000556284 POTEHQ6S545 545 aa12.96□□□□□ -0.33
MTHFD1-213ENST00000556284 PTF1AQ7RTS3 328 aa12.96□□□□□ -0.33
MTHFD1-213ENST00000556284 VSIG10Q8N0Z9 540 aa12.96□□□□□ -0.33
MTHFD1-213ENST00000556284 ZNF579Q8NAF0 562 aaKnown RBP12.96□□□□□ -0.33
MTHFD1-213ENST00000556284 C8orf58Q8NAV2 365 aa12.96□□□□□ -0.33
MTHFD1-213ENST00000556284 PHF12Q96QT6 1004 aa12.96□□□□□ -0.33
MTHFD1-213ENST00000556284 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
MTHFD1-213ENST00000556284 KAT6BQ8WYB5 2073 aa12.96□□□□□ -0.33
MTHFD1-213ENST00000556284 DOT1LQ8TEK3 1739 aa12.96□□□□□ -0.34
MTHFD1-213ENST00000556284 VIRMAQ69YN4 1812 aaKnown RBP12.95□□□□□ -0.34
MTHFD1-213ENST00000556284 PTCD1O75127 700 aaKnown RBP12.95□□□□□ -0.34
MTHFD1-213ENST00000556284 TWISTNBQ3B726 338 aaPredicted RBP12.95□□□□□ -0.34
MTHFD1-213ENST00000556284 ZNF428Q96B54 188 aa12.95□□□□□ -0.34
MTHFD1-213ENST00000556284 TEX13AQ9BXU3 409 aaPredicted RBP12.95□□□□□ -0.34
MTHFD1-213ENST00000556284 ITGB4P16144 1822 aa12.95□□□□□ -0.34
MTHFD1-213ENST00000556284 NHSQ6T4R5 1651 aa12.94□□□□□ -0.34
MTHFD1-213ENST00000556284 VAMP4O75379 141 aa12.94□□□□□ -0.34
MTHFD1-213ENST00000556284 KRT24Q2M2I5 525 aa12.94□□□□□ -0.34
MTHFD1-213ENST00000556284 TSPYL6Q8N831 410 aa12.94□□□□□ -0.34
MTHFD1-213ENST00000556284 PCDHB8Q9UN66 801 aa12.94□□□□□ -0.34
MTHFD1-213ENST00000556284 PALLDQ8WX93 1383 aa12.94□□□□□ -0.34
MTHFD1-213ENST00000556284 LOC102724428A0A0B4J2F2 783 aa12.93□□□□□ -0.34
MTHFD1-213ENST00000556284 ELL2O00472 640 aaPredicted RBP12.93□□□□□ -0.34
MTHFD1-213ENST00000556284 PLSCR1O15162 318 aa12.93□□□□□ -0.34
MTHFD1-213ENST00000556284 HMGB2P26583 209 aaKnown RBP12.93□□□□□ -0.34
MTHFD1-213ENST00000556284 SIK1P57059 783 aa12.93□□□□□ -0.34
MTHFD1-213ENST00000556284 HS6ST3Q8IZP7 471 aa12.93□□□□□ -0.34
MTHFD1-213ENST00000556284 KDM3BQ7LBC6 1761 aa12.93□□□□□ -0.34
MTHFD1-213ENST00000556284 APBA3O96018 575 aa12.92□□□□□ -0.34
MTHFD1-213ENST00000556284 CCDC125Q86Z20 511 aa12.92□□□□□ -0.34
MTHFD1-213ENST00000556284 SBF2Q86WG5 1849 aa12.92□□□□□ -0.34
MTHFD1-213ENST00000556284 KCPQ6ZWJ8 1503 aa12.92□□□□□ -0.34
MTHFD1-213ENST00000556284 PAPPAQ13219 1627 aa12.91□□□□□ -0.34
MTHFD1-213ENST00000556284 ATP6V1AP38606 617 aa12.91□□□□□ -0.34
MTHFD1-213ENST00000556284 ALDH1L2Q3SY69 923 aa12.91□□□□□ -0.34
MTHFD1-213ENST00000556284 CCDC30Q5VVM6 783 aa12.91□□□□□ -0.34
MTHFD1-213ENST00000556284 BBXQ8WY36 941 aaPredicted RBP12.91□□□□□ -0.34
MTHFD1-213ENST00000556284 SLC4A9Q96Q91 983 aa12.91□□□□□ -0.34
MTHFD1-213ENST00000556284 STK25O00506 426 aa12.9□□□□□ -0.34
MTHFD1-213ENST00000556284 STARD3NLO95772 234 aa12.9□□□□□ -0.34
MTHFD1-213ENST00000556284 SF3B2Q13435 895 aaKnown RBP12.9□□□□□ -0.34
MTHFD1-213ENST00000556284 HDGFL1Q5TGJ6 251 aa12.9□□□□□ -0.34
MTHFD1-213ENST00000556284 IFNL1Q8IU54 200 aa12.9□□□□□ -0.34
MTHFD1-213ENST00000556284 RCAN3Q9UKA8 241 aa12.9□□□□□ -0.34
MTHFD1-213ENST00000556284 USP16Q9Y5T5 823 aa12.9□□□□□ -0.34
MTHFD1-213ENST00000556284 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.89□□□□□ -0.35
MTHFD1-213ENST00000556284 PRAMEF22A3QJZ6 481 aa12.89□□□□□ -0.35
MTHFD1-213ENST00000556284 EIF2S2P20042 333 aaKnown RBP12.89□□□□□ -0.35
MTHFD1-213ENST00000556284 RARSP54136 660 aaKnown RBP12.89□□□□□ -0.35
MTHFD1-213ENST00000556284 PDAP1Q13442 181 aaKnown RBP12.89□□□□□ -0.35
MTHFD1-213ENST00000556284 SLC27A3Q5K4L6 730 aa12.89□□□□□ -0.35
MTHFD1-213ENST00000556284 DNAJC10Q8IXB1 793 aa12.89□□□□□ -0.35
MTHFD1-213ENST00000556284 ZFP91Q96JP5 570 aaPredicted RBP12.89□□□□□ -0.35
MTHFD1-213ENST00000556284 CCNL1Q9UK58 526 aaPredicted RBP12.89□□□□□ -0.35
MTHFD1-213ENST00000556284 BTAF1O14981 1849 aa12.89□□□□□ -0.35
MTHFD1-213ENST00000556284 ERBB4Q15303 1308 aa12.88□□□□□ -0.35
MTHFD1-213ENST00000556284 SSH1Q8WYL5 1049 aa12.88□□□□□ -0.35
MTHFD1-213ENST00000556284 STK31Q9BXU1 1019 aa12.88□□□□□ -0.35
MTHFD1-213ENST00000556284 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.88□□□□□ -0.35
MTHFD1-213ENST00000556284 DBF4Q9UBU7 674 aaPredicted RBP12.88□□□□□ -0.35
MTHFD1-213ENST00000556284 UBR2Q8IWV8 1755 aa12.88□□□□□ -0.35
MTHFD1-213ENST00000556284 CYP19A1P11511 503 aaPredicted RBP12.87□□□□□ -0.35
MTHFD1-213ENST00000556284 BAG6P46379 1132 aa12.87□□□□□ -0.35
MTHFD1-213ENST00000556284 BRPF1P55201 1214 aaPredicted RBP12.87□□□□□ -0.35
MTHFD1-213ENST00000556284 ITPK1Q13572 414 aa12.87□□□□□ -0.35
MTHFD1-213ENST00000556284 TXNRD1Q16881 649 aa12.87□□□□□ -0.35
MTHFD1-213ENST00000556284 EVX2Q03828 476 aa12.86□□□□□ -0.35
MTHFD1-213ENST00000556284 RC3H1Q5TC82 1133 aaKnown RBP12.86□□□□□ -0.35
MTHFD1-213ENST00000556284 MRPL50Q8N5N7 158 aaKnown RBP12.86□□□□□ -0.35
MTHFD1-213ENST00000556284 NECTIN2Q92692 538 aa12.86□□□□□ -0.35
MTHFD1-213ENST00000556284 DDX21Q9NR30 783 aaKnown RBP eCLIP12.86□□□□□ -0.35
MTHFD1-213ENST00000556284 HYPKQ9NX55 129 aa12.86□□□□□ -0.35
MTHFD1-213ENST00000556284 CAMKK2Q96RR4 588 aa12.85□□□□□ -0.35
MTHFD1-213ENST00000556284 LRRC4BQ9NT99 713 aa12.85□□□□□ -0.35
MTHFD1-213ENST00000556284 SMC4Q9NTJ3 1288 aa12.85□□□□□ -0.35
MTHFD1-213ENST00000556284 CCDC87Q9NVE4 849 aa12.85□□□□□ -0.35
MTHFD1-213ENST00000556284 CHPF2Q9P2E5 772 aa12.85□□□□□ -0.35
MTHFD1-213ENST00000556284 CNTNAP4Q9C0A0 1308 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms