RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 RNF20Q5VTR2 975 aa7.03□□□□□ -1.28
ATXN3-237ENST00000556274 CCDC116Q8IYX3 515 aa7.03□□□□□ -1.28
ATXN3-237ENST00000556274 ATP13A2Q9NQ11 1180 aa7.03□□□□□ -1.28
ATXN3-237ENST00000556274 KDM5CP41229 1560 aa7.03□□□□□ -1.28
ATXN3-237ENST00000556274 ADAMTSL3P82987 1691 aa7.03□□□□□ -1.28
ATXN3-237ENST00000556274 CLTCQ00610 1675 aaKnown RBP7.03□□□□□ -1.28
ATXN3-237ENST00000556274 KIAA1107Q9UPP5 1409 aa7.02□□□□□ -1.29
ATXN3-237ENST00000556274 ERVH48-1M5A8F1 160 aa7.02□□□□□ -1.29
ATXN3-237ENST00000556274 PPP1R26Q5T8A7 1209 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-237ENST00000556274 SEPT12Q8IYM1 358 aa7.02□□□□□ -1.29
ATXN3-237ENST00000556274 ZSCAN1Q8NBB4 408 aa7.02□□□□□ -1.29
ATXN3-237ENST00000556274 ADAMTS19Q8TE59 1207 aa7.02□□□□□ -1.29
ATXN3-237ENST00000556274 GLMNQ92990 594 aa7.02□□□□□ -1.29
ATXN3-237ENST00000556274 CALR3Q96L12 384 aaKnown RBP7.02□□□□□ -1.29
ATXN3-237ENST00000556274 TRIM47Q96LD4 638 aa7.02□□□□□ -1.29
ATXN3-237ENST00000556274 MLH3Q9UHC1 1453 aa7.02□□□□□ -1.29
ATXN3-237ENST00000556274 CROCC2H7BZ55 1655 aa7.01□□□□□ -1.29
ATXN3-237ENST00000556274 CCDC141Q6ZP82 1450 aa7.01□□□□□ -1.29
ATXN3-237ENST00000556274 WDR4P57081 412 aaKnown RBP7.01□□□□□ -1.29
ATXN3-237ENST00000556274 CCDC125Q86Z20 511 aa7.01□□□□□ -1.29
ATXN3-237ENST00000556274 RNF135Q8IUD6 432 aa7.01□□□□□ -1.29
ATXN3-237ENST00000556274 PGPEP1Q9NXJ5 209 aa7.01□□□□□ -1.29
ATXN3-237ENST00000556274 EMILIN1Q9Y6C2 1016 aa7.01□□□□□ -1.29
ATXN3-237ENST00000556274 FGD6Q6ZV73 1430 aa7.01□□□□□ -1.29
ATXN3-237ENST00000556274 MIA2Q96PC5 1412 aa7.01□□□□□ -1.29
ATXN3-237ENST00000556274 ARHGEF5Q12774 1597 aa7□□□□□ -1.29
ATXN3-237ENST00000556274 INO80Q9ULG1 1556 aaPredicted RBP7□□□□□ -1.29
ATXN3-237ENST00000556274 A2MP01023 1474 aa7□□□□□ -1.29
ATXN3-237ENST00000556274 MBD5Q9P267 1494 aa7□□□□□ -1.29
ATXN3-237ENST00000556274 CAPN5O15484 640 aaPredicted RBP7□□□□□ -1.29
ATXN3-237ENST00000556274 ZIC2O95409 532 aaPredicted RBP7□□□□□ -1.29
ATXN3-237ENST00000556274 TMPRSS4Q9NRS4 437 aa7□□□□□ -1.29
ATXN3-237ENST00000556274 PCDHB11Q9Y5F2 797 aa7□□□□□ -1.29
ATXN3-237ENST00000556274 C3P01024 1663 aa7□□□□□ -1.29
ATXN3-237ENST00000556274 DNMT1P26358 1616 aaKnown RBP6.99□□□□□ -1.29
ATXN3-237ENST00000556274 GMPRP36959 345 aa6.99□□□□□ -1.29
ATXN3-237ENST00000556274 TSGA10IPQ3SY00 556 aa6.99□□□□□ -1.29
ATXN3-237ENST00000556274 PHTF2Q8N3S3 785 aa6.99□□□□□ -1.29
ATXN3-237ENST00000556274 ITPKCQ96DU7 683 aa6.99□□□□□ -1.29
ATXN3-237ENST00000556274 KLF16Q9BXK1 252 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-237ENST00000556274 ZFAND3Q9H8U3 227 aa6.99□□□□□ -1.29
ATXN3-237ENST00000556274 WASHC2CQ9Y4E1 1318 aa6.99□□□□□ -1.29
ATXN3-237ENST00000556274 CEP152O94986 1710 aa6.98□□□□□ -1.29
ATXN3-237ENST00000556274 PTPRMP28827 1452 aa6.98□□□□□ -1.29
ATXN3-237ENST00000556274 PIK3CDO00329 1044 aa6.98□□□□□ -1.29
ATXN3-237ENST00000556274 SKIP12755 728 aa6.98□□□□□ -1.29
ATXN3-237ENST00000556274 TIMP2P16035 220 aa6.98□□□□□ -1.29
ATXN3-237ENST00000556274 TRIM52Q96A61 297 aa6.98□□□□□ -1.29
ATXN3-237ENST00000556274 CCDC85AQ96PX6 553 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-237ENST00000556274 RTEL1-TNFRSF6BF6WH68 1400 aa6.98□□□□□ -1.29
ATXN3-237ENST00000556274 DHX29Q7Z478 1369 aaKnown RBP6.97□□□□□ -1.29
ATXN3-237ENST00000556274 ABCC5O15440 1437 aa6.97□□□□□ -1.29
ATXN3-237ENST00000556274 DAPK1P53355 1430 aa6.97□□□□□ -1.29
ATXN3-237ENST00000556274 ZNF784Q8NCA9 323 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-237ENST00000556274 SENP2Q9HC62 589 aa6.97□□□□□ -1.29
ATXN3-237ENST00000556274 CYLDQ9NQC7 956 aa6.97□□□□□ -1.29
ATXN3-237ENST00000556274 DOLKQ9UPQ8 538 aa6.97□□□□□ -1.29
ATXN3-237ENST00000556274 ANKRD30AQ9BXX3 1397 aa6.96□□□□□ -1.29
ATXN3-237ENST00000556274 HSPA2P54652 639 aa6.96□□□□□ -1.3
ATXN3-237ENST00000556274 MAP7D1Q3KQU3 841 aa6.96□□□□□ -1.3
ATXN3-237ENST00000556274 PLPP7Q8NBV4 271 aa6.96□□□□□ -1.3
ATXN3-237ENST00000556274 CDCA7Q9BWT1 371 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-237ENST00000556274 MAST1Q9Y2H9 1570 aa6.95□□□□□ -1.3
ATXN3-237ENST00000556274 CBLBQ13191 982 aa6.95□□□□□ -1.3
ATXN3-237ENST00000556274 OXLD1Q5BKU9 147 aa6.95□□□□□ -1.3
ATXN3-237ENST00000556274 NFATC2IPQ8NCF5 419 aa6.95□□□□□ -1.3
ATXN3-237ENST00000556274 SLC16A10Q8TF71 515 aa6.95□□□□□ -1.3
ATXN3-237ENST00000556274 UCN2Q96RP3 112 aa6.95□□□□□ -1.3
ATXN3-237ENST00000556274 TFIP11Q9UBB9 837 aaKnown RBP6.95□□□□□ -1.3
ATXN3-237ENST00000556274 TCOF1Q13428 1488 aaKnown RBP6.95□□□□□ -1.3
ATXN3-237ENST00000556274 PREX1Q8TCU6 1659 aa6.95□□□□□ -1.3
ATXN3-237ENST00000556274 AGLP35573 1532 aa6.95□□□□□ -1.3
ATXN3-237ENST00000556274 REREQ9P2R6 1566 aa6.95□□□□□ -1.3
ATXN3-237ENST00000556274 ZMYM3Q14202 1370 aa6.95□□□□□ -1.3
ATXN3-237ENST00000556274 KIF15Q9NS87 1388 aa6.95□□□□□ -1.3
ATXN3-237ENST00000556274 MROH2AA6NES4 1674 aa6.94□□□□□ -1.3
ATXN3-237ENST00000556274 ATP9BO43861 1147 aa6.94□□□□□ -1.3
ATXN3-237ENST00000556274 LILRA1O75019 489 aa6.94□□□□□ -1.3
ATXN3-237ENST00000556274 MYCP01106 439 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-237ENST00000556274 ADD1P35611 737 aaKnown RBP6.94□□□□□ -1.3
ATXN3-237ENST00000556274 SCTRP47872 440 aa6.94□□□□□ -1.3
ATXN3-237ENST00000556274 USP4Q13107 963 aa6.94□□□□□ -1.3
ATXN3-237ENST00000556274 CC2D2BQ6DHV5 1058 aa6.94□□□□□ -1.3
ATXN3-237ENST00000556274 TBC1D9Q6ZT07 1266 aa6.94□□□□□ -1.3
ATXN3-237ENST00000556274 PPP1R12CQ9BZL4 782 aa6.94□□□□□ -1.3
ATXN3-237ENST00000556274 DUOX2Q9NRD8 1548 aa6.94□□□□□ -1.3
ATXN3-237ENST00000556274 KANK1Q14678 1352 aa6.94□□□□□ -1.3
ATXN3-237ENST00000556274 ERVK-9P63128 1117 aa6.93□□□□□ -1.3
ATXN3-237ENST00000556274 Q6ZVU0 165 aa6.93□□□□□ -1.3
ATXN3-237ENST00000556274 DEPDC4Q8N2C3 294 aa6.93□□□□□ -1.3
ATXN3-237ENST00000556274 KIFC2Q96AC6 838 aa6.93□□□□□ -1.3
ATXN3-237ENST00000556274 SIRT1Q96EB6 747 aa6.93□□□□□ -1.3
ATXN3-237ENST00000556274 NXF1Q9UBU9 619 aaKnown RBP6.93□□□□□ -1.3
ATXN3-237ENST00000556274 PLXNC1O60486 1568 aa6.93□□□□□ -1.3
ATXN3-237ENST00000556274 PALM3A6NDB9 673 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-237ENST00000556274 USP17L5A8MUK1 530 aa6.92□□□□□ -1.3
ATXN3-237ENST00000556274 UPP2O95045 317 aa6.92□□□□□ -1.3
ATXN3-237ENST00000556274 EML3Q32P44 896 aa6.92□□□□□ -1.3
ATXN3-237ENST00000556274 CCDC97Q96F63 343 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-237ENST00000556274 AGBL1Q96MI9 1066 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms