RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 EXOC5O00471 708 aa23.4■■□□□ 1.34
SDR39U1-218ENST00000556262 CEP85Q6P2H3 762 aa23.4■■□□□ 1.34
SDR39U1-218ENST00000556262 DNAAF4Q8WXU2 420 aa23.4■■□□□ 1.34
SDR39U1-218ENST00000556262 GLI3P10071 1580 aa23.4■■□□□ 1.34
SDR39U1-218ENST00000556262 MYL6BP14649 208 aa23.4■■□□□ 1.34
SDR39U1-218ENST00000556262 WNK3Q9BYP7 1800 aa23.39■■□□□ 1.34
SDR39U1-218ENST00000556262 JCADQ9P266 1359 aa23.39■■□□□ 1.34
SDR39U1-218ENST00000556262 SLIT2O94813 1529 aa23.39■■□□□ 1.34
SDR39U1-218ENST00000556262 PIP4K2AP48426 406 aaPredicted RBP23.39■■□□□ 1.33
SDR39U1-218ENST00000556262 ANKRD44Q8N8A2 993 aa23.39■■□□□ 1.33
SDR39U1-218ENST00000556262 AIMP1Q12904 312 aaKnown RBP23.38■■□□□ 1.33
SDR39U1-218ENST00000556262 IPO9Q96P70 1041 aaKnown RBP23.38■■□□□ 1.33
SDR39U1-218ENST00000556262 TMOD3Q9NYL9 352 aa23.38■■□□□ 1.33
SDR39U1-218ENST00000556262 CCDC9Q9Y3X0 531 aaKnown RBP23.38■■□□□ 1.33
SDR39U1-218ENST00000556262 PTCD1O75127 700 aaKnown RBP23.38■■□□□ 1.33
SDR39U1-218ENST00000556262 SRCIN1Q9C0H9 1055 aa23.38■■□□□ 1.33
SDR39U1-218ENST00000556262 NWD2Q9ULI1 1742 aa23.37■■□□□ 1.33
SDR39U1-218ENST00000556262 NUCB1Q02818 461 aa23.37■■□□□ 1.33
SDR39U1-218ENST00000556262 BEND3Q5T5X7 828 aa23.37■■□□□ 1.33
SDR39U1-218ENST00000556262 RPAP2Q8IXW5 612 aaPredicted RBP23.37■■□□□ 1.33
SDR39U1-218ENST00000556262 GCC1Q96CN9 775 aa23.37■■□□□ 1.33
SDR39U1-218ENST00000556262 C8orf37Q96NL8 207 aa23.37■■□□□ 1.33
SDR39U1-218ENST00000556262 USP44Q9H0E7 712 aa23.37■■□□□ 1.33
SDR39U1-218ENST00000556262 MAP3K2Q9Y2U5 619 aa23.37■■□□□ 1.33
SDR39U1-218ENST00000556262 UBR2Q8IWV8 1755 aa23.37■■□□□ 1.33
SDR39U1-218ENST00000556262 SPATA31A5Q5VU36 1347 aa23.36■■□□□ 1.33
SDR39U1-218ENST00000556262 SPATA31A7Q8IWB4 1347 aa23.36■■□□□ 1.33
SDR39U1-218ENST00000556262 PAPPAQ13219 1627 aa23.36■■□□□ 1.33
SDR39U1-218ENST00000556262 GNAI2P04899 355 aa23.36■■□□□ 1.33
SDR39U1-218ENST00000556262 PIGBQ92521 554 aa23.36■■□□□ 1.33
SDR39U1-218ENST00000556262 LNPKQ9C0E8 428 aa23.36■■□□□ 1.33
SDR39U1-218ENST00000556262 KCPQ6ZWJ8 1503 aa23.35■■□□□ 1.33
SDR39U1-218ENST00000556262 GNAI3P08754 354 aa23.35■■□□□ 1.33
SDR39U1-218ENST00000556262 ANKRD45Q5TZF3 282 aa23.35■■□□□ 1.33
SDR39U1-218ENST00000556262 KSR2Q6VAB6 950 aa23.35■■□□□ 1.33
SDR39U1-218ENST00000556262 THRAP3Q9Y2W1 955 aaKnown RBP23.35■■□□□ 1.33
SDR39U1-218ENST00000556262 ITGB4P16144 1822 aa23.34■■□□□ 1.33
SDR39U1-218ENST00000556262 NGLY1Q96IV0 654 aa23.34■■□□□ 1.33
SDR39U1-218ENST00000556262 TNS2Q63HR2 1409 aa23.34■■□□□ 1.33
SDR39U1-218ENST00000556262 C8orf34Q49A92 452 aa23.34■■□□□ 1.33
SDR39U1-218ENST00000556262 CHD1LQ86WJ1 897 aa23.34■■□□□ 1.33
SDR39U1-218ENST00000556262 FAM161AQ3B820 660 aa23.33■■□□□ 1.33
SDR39U1-218ENST00000556262 LRP10Q7Z4F1 713 aa23.33■■□□□ 1.33
SDR39U1-218ENST00000556262 XAGE3Q8WTP9 111 aa23.33■■□□□ 1.33
SDR39U1-218ENST00000556262 ASAP1Q9ULH1 1129 aa23.33■■□□□ 1.33
SDR39U1-218ENST00000556262 DDB1Q16531 1140 aa23.32■■□□□ 1.32
SDR39U1-218ENST00000556262 COPS6Q7L5N1 327 aa23.32■■□□□ 1.32
SDR39U1-218ENST00000556262 UNC5CLQ8IV45 518 aa23.32■■□□□ 1.32
SDR39U1-218ENST00000556262 CDCA7Q9BWT1 371 aaPredicted RBP23.32■■□□□ 1.32
SDR39U1-218ENST00000556262 DCTPP1Q9H773 170 aa23.32■■□□□ 1.32
SDR39U1-218ENST00000556262 LAMB4A4D0S4 1761 aa23.32■■□□□ 1.32
SDR39U1-218ENST00000556262 LRRFIP2Q9Y608 721 aaKnown RBP23.32■■□□□ 1.32
SDR39U1-218ENST00000556262 UBTFL1P0CB47 393 aaPredicted RBP23.31■■□□□ 1.32
SDR39U1-218ENST00000556262 DDX58O95786 925 aaKnown RBP23.31■■□□□ 1.32
SDR39U1-218ENST00000556262 NBPF7P0C2Y1 421 aaPredicted RBP23.3■■□□□ 1.32
SDR39U1-218ENST00000556262 SYTL4Q96C24 671 aaPredicted RBP23.3■■□□□ 1.32
SDR39U1-218ENST00000556262 BCL9LQ86UU0 1499 aa23.3■■□□□ 1.32
SDR39U1-218ENST00000556262 CWF19L2Q2TBE0 894 aaKnown RBP23.29■■□□□ 1.32
SDR39U1-218ENST00000556262 RIC3Q7Z5B4 369 aa23.29■■□□□ 1.32
SDR39U1-218ENST00000556262 ATG3Q9NT62 314 aa23.29■■□□□ 1.32
SDR39U1-218ENST00000556262 LRP6O75581 1613 aa23.29■■□□□ 1.32
SDR39U1-218ENST00000556262 NBPF26B4DH59 902 aa23.29■■□□□ 1.32
SDR39U1-218ENST00000556262 HSPA1LP34931 641 aa23.29■■□□□ 1.32
SDR39U1-218ENST00000556262 NBPF14Q5TI25 921 aa23.29■■□□□ 1.32
SDR39U1-218ENST00000556262 NBPF10Q6P3W6 841 aaKnown RBP23.29■■□□□ 1.32
SDR39U1-218ENST00000556262 NBPF15Q8N660 670 aa23.29■■□□□ 1.32
SDR39U1-218ENST00000556262 PNMA6EA0A0J9YXQ4 647 aa23.28■■□□□ 1.32
SDR39U1-218ENST00000556262 A1BGP04217 495 aa23.28■■□□□ 1.32
SDR39U1-218ENST00000556262 BARGINQ6ZT62 677 aa23.28■■□□□ 1.32
SDR39U1-218ENST00000556262 BCL9O00512 1426 aa23.27■■□□□ 1.32
SDR39U1-218ENST00000556262 HMMRO75330 724 aa23.27■■□□□ 1.32
SDR39U1-218ENST00000556262 PRIM1P49642 420 aaKnown RBP23.27■■□□□ 1.32
SDR39U1-218ENST00000556262 MARCH10Q8NA82 808 aaPredicted RBP23.27■■□□□ 1.32
SDR39U1-218ENST00000556262 BCL11AQ9H165 835 aa23.27■■□□□ 1.32
SDR39U1-218ENST00000556262 SPATA31A6Q5VVP1 1343 aa23.26■■□□□ 1.31
SDR39U1-218ENST00000556262 APBB1O00213 710 aa23.26■■□□□ 1.31
SDR39U1-218ENST00000556262 FAM98CQ17RN3 349 aaKnown RBP23.26■■□□□ 1.31
SDR39U1-218ENST00000556262 ZBTB47Q9UFB7 747 aaPredicted RBP23.26■■□□□ 1.31
SDR39U1-218ENST00000556262 ATP8B2P98198 1209 aa23.25■■□□□ 1.31
SDR39U1-218ENST00000556262 ANKRD13DQ6ZTN6 518 aa23.25■■□□□ 1.31
SDR39U1-218ENST00000556262 FNBP4Q8N3X1 1017 aaPredicted RBP23.25■■□□□ 1.31
SDR39U1-218ENST00000556262 RBM42Q9BTD8 480 aaKnown RBP23.25■■□□□ 1.31
SDR39U1-218ENST00000556262 DOT1LQ8TEK3 1739 aa23.25■■□□□ 1.31
SDR39U1-218ENST00000556262 ALDH1L1O75891 902 aa23.25■■□□□ 1.31
SDR39U1-218ENST00000556262 VPS72Q15906 364 aa23.25■■□□□ 1.31
SDR39U1-218ENST00000556262 LINS1Q8NG48 757 aa23.25■■□□□ 1.31
SDR39U1-218ENST00000556262 IGKV5-2P06315 115 aa23.24■■□□□ 1.31
SDR39U1-218ENST00000556262 C9orf78Q9NZ63 289 aaPredicted RBP23.23■■□□□ 1.31
SDR39U1-218ENST00000556262 ERBB4Q15303 1308 aa23.23■■□□□ 1.31
SDR39U1-218ENST00000556262 A0A0G2JS52 829 aa23.23■■□□□ 1.31
SDR39U1-218ENST00000556262 ACSBG1Q96GR2 724 aa23.23■■□□□ 1.31
SDR39U1-218ENST00000556262 MYD88Q99836 296 aa23.23■■□□□ 1.31
SDR39U1-218ENST00000556262 NPM2Q86SE8 214 aaKnown RBP23.22■■□□□ 1.31
SDR39U1-218ENST00000556262 DNAJC10Q8IXB1 793 aa23.22■■□□□ 1.31
SDR39U1-218ENST00000556262 METTL22Q9BUU2 404 aaPredicted RBP23.22■■□□□ 1.31
SDR39U1-218ENST00000556262 USP21Q9UK80 565 aa23.22■■□□□ 1.31
SDR39U1-218ENST00000556262 SMARCA5O60264 1052 aaPredicted RBP23.21■■□□□ 1.31
SDR39U1-218ENST00000556262 EXOC6BQ9Y2D4 811 aa23.21■■□□□ 1.31
SDR39U1-218ENST00000556262 C16orf71Q8IYS4 520 aaPredicted RBP23.21■■□□□ 1.31
SDR39U1-218ENST00000556262 SLC4A9Q96Q91 983 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms