RNA–Protein interactions for RNA: ENST00000556093.1

TMEM55B-206, humanhuman

TSL 2

Gene TMEM55B, Length 277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-206ENST00000556093 NLGN1Q8N2Q7 840 aa17.09■□□□□ 0.33
TMEM55B-206ENST00000556093 TEX13AQ9BXU3 409 aaPredicted RBP17.09■□□□□ 0.33
TMEM55B-206ENST00000556093 KCNQ3O43525 872 aa17.08■□□□□ 0.32
TMEM55B-206ENST00000556093 MMP10P09238 476 aa17.08■□□□□ 0.32
TMEM55B-206ENST00000556093 TAF7Q15545 349 aaPredicted RBP17.07■□□□□ 0.32
TMEM55B-206ENST00000556093 NLGN2Q8NFZ4 835 aa17.07■□□□□ 0.32
TMEM55B-206ENST00000556093 CD2APQ9Y5K6 639 aa17.07■□□□□ 0.32
TMEM55B-206ENST00000556093 LMOD3Q0VAK6 560 aa17.06■□□□□ 0.32
TMEM55B-206ENST00000556093 PNISRQ8TF01 805 aaKnown RBP17.06■□□□□ 0.32
TMEM55B-206ENST00000556093 SRP68Q9UHB9 627 aaKnown RBP17.06■□□□□ 0.32
TMEM55B-206ENST00000556093 GOLGB1Q14789 3259 aaKnown RBP17.06■□□□□ 0.32
TMEM55B-206ENST00000556093 UTRNP46939 3433 aa17.06■□□□□ 0.32
TMEM55B-206ENST00000556093 C10orf71Q711Q0 1435 aa17.05■□□□□ 0.32
TMEM55B-206ENST00000556093 BCORQ6W2J9 1755 aa17.05■□□□□ 0.32
TMEM55B-206ENST00000556093 KIAA1551Q9HCM1 1747 aa17.05■□□□□ 0.32
TMEM55B-206ENST00000556093 TMPOP42166 694 aaKnown RBP17.05■□□□□ 0.32
TMEM55B-206ENST00000556093 RIPK4P57078 832 aa17.05■□□□□ 0.32
TMEM55B-206ENST00000556093 CCDC146Q8IYE0 955 aa17.05■□□□□ 0.32
TMEM55B-206ENST00000556093 RUNDC1Q96C34 613 aa17.05■□□□□ 0.32
TMEM55B-206ENST00000556093 THUMPD2Q9BTF0 503 aaKnown RBP17.05■□□□□ 0.32
TMEM55B-206ENST00000556093 CHD4Q14839 1912 aa17.05■□□□□ 0.32
TMEM55B-206ENST00000556093 ZPR1O75312 459 aa17.04■□□□□ 0.32
TMEM55B-206ENST00000556093 CANXP27824 592 aaKnown RBP17.04■□□□□ 0.32
TMEM55B-206ENST00000556093 ADAMTS8Q9UP79 889 aa17.04■□□□□ 0.32
TMEM55B-206ENST00000556093 SNRPA1P09661 255 aaKnown RBP17.03■□□□□ 0.32
TMEM55B-206ENST00000556093 EIF5P55010 431 aaKnown RBP17.03■□□□□ 0.32
TMEM55B-206ENST00000556093 NARFQ9UHQ1 456 aa17.03■□□□□ 0.32
TMEM55B-206ENST00000556093 A0A087WZG4 1122 aa17.02■□□□□ 0.32
TMEM55B-206ENST00000556093 IL6STP40189 918 aaPredicted RBP17.02■□□□□ 0.32
TMEM55B-206ENST00000556093 FKBP8Q14318 412 aa17.02■□□□□ 0.32
TMEM55B-206ENST00000556093 USPL1Q5W0Q7 1092 aa17.02■□□□□ 0.32
TMEM55B-206ENST00000556093 AFDNP55196 1824 aaKnown RBP17.02■□□□□ 0.31
TMEM55B-206ENST00000556093 NRXN2Q9P2S2 1712 aa17.01■□□□□ 0.31
TMEM55B-206ENST00000556093 ANP32CO43423 234 aa17.01■□□□□ 0.31
TMEM55B-206ENST00000556093 MIS18AQ9NYP9 233 aa17.01■□□□□ 0.31
TMEM55B-206ENST00000556093 RRP7AQ9Y3A4 280 aaKnown RBP17.01■□□□□ 0.31
TMEM55B-206ENST00000556093 PARP3Q9Y6F1 533 aa17.01■□□□□ 0.31
TMEM55B-206ENST00000556093 PXDNLA1KZ92 1463 aa17■□□□□ 0.31
TMEM55B-206ENST00000556093 N4BP2Q86UW6 1770 aaPredicted RBP17■□□□□ 0.31
TMEM55B-206ENST00000556093 PRAMEF22A3QJZ6 481 aa17■□□□□ 0.31
TMEM55B-206ENST00000556093 GPR162Q16538 588 aa17■□□□□ 0.31
TMEM55B-206ENST00000556093 ZNF330Q9Y3S2 320 aaPredicted RBP17■□□□□ 0.31
TMEM55B-206ENST00000556093 USP16Q9Y5T5 823 aa17■□□□□ 0.31
TMEM55B-206ENST00000556093 BRCA1P38398 1863 aaKnown RBP16.99■□□□□ 0.31
TMEM55B-206ENST00000556093 A1BGP04217 495 aa16.99■□□□□ 0.31
TMEM55B-206ENST00000556093 DDR1Q08345 913 aa16.99■□□□□ 0.31
TMEM55B-206ENST00000556093 BABAM1Q9NWV8 329 aa16.99■□□□□ 0.31
TMEM55B-206ENST00000556093 EIF4A1P60842 406 aaKnown RBP16.98■□□□□ 0.31
TMEM55B-206ENST00000556093 NEUROD2Q15784 382 aa16.98■□□□□ 0.31
TMEM55B-206ENST00000556093 NPM2Q86SE8 214 aaKnown RBP16.98■□□□□ 0.31
TMEM55B-206ENST00000556093 PELP1Q8IZL8 1130 aaKnown RBP16.98■□□□□ 0.31
TMEM55B-206ENST00000556093 BCL2L12Q9HB09 334 aa16.98■□□□□ 0.31
TMEM55B-206ENST00000556093 TSPYL4Q9UJ04 414 aa16.98■□□□□ 0.31
TMEM55B-206ENST00000556093 POLRMTO00411 1230 aaKnown RBP16.97■□□□□ 0.31
TMEM55B-206ENST00000556093 TRIM35Q9UPQ4 493 aa16.97■□□□□ 0.31
TMEM55B-206ENST00000556093 GIGYF1O75420 1035 aaPredicted RBP16.96■□□□□ 0.31
TMEM55B-206ENST00000556093 TM4SF1P30408 202 aa16.96■□□□□ 0.31
TMEM55B-206ENST00000556093 NFIXQ14938 502 aa16.96■□□□□ 0.31
TMEM55B-206ENST00000556093 CCDC184Q52MB2 194 aa16.96■□□□□ 0.31
TMEM55B-206ENST00000556093 YBX3P16989 372 aaKnown RBP eCLIP16.95■□□□□ 0.3
TMEM55B-206ENST00000556093 PIP4K2AP48426 406 aaPredicted RBP16.95■□□□□ 0.3
TMEM55B-206ENST00000556093 TGFB2P61812 414 aa16.95■□□□□ 0.3
TMEM55B-206ENST00000556093 TBC1D2BQ9UPU7 963 aa16.95■□□□□ 0.3
TMEM55B-206ENST00000556093 DLEC1Q9Y238 1755 aa16.94■□□□□ 0.3
TMEM55B-206ENST00000556093 NBPF26B4DH59 902 aa16.94■□□□□ 0.3
TMEM55B-206ENST00000556093 CAMTA2O94983 1202 aa16.94■□□□□ 0.3
TMEM55B-206ENST00000556093 YY1P25490 414 aa16.94■□□□□ 0.3
TMEM55B-206ENST00000556093 NBPF10Q6P3W6 841 aaKnown RBP16.94■□□□□ 0.3
TMEM55B-206ENST00000556093 DZIP3Q86Y13 1208 aaKnown RBP16.94■□□□□ 0.3
TMEM55B-206ENST00000556093 NBPF15Q8N660 670 aa16.94■□□□□ 0.3
TMEM55B-206ENST00000556093 MRS2Q9HD23 443 aa16.94■□□□□ 0.3
TMEM55B-206ENST00000556093 CARMIL3Q8ND23 1372 aa16.93■□□□□ 0.3
TMEM55B-206ENST00000556093 APAF1O14727 1248 aa16.93■□□□□ 0.3
TMEM55B-206ENST00000556093 GRIN3BO60391 1043 aa16.93■□□□□ 0.3
TMEM55B-206ENST00000556093 ARFGEF1Q9Y6D6 1849 aa16.93■□□□□ 0.3
TMEM55B-206ENST00000556093 ERBB4Q15303 1308 aa16.93■□□□□ 0.3
TMEM55B-206ENST00000556093 ANKRD31Q8N7Z5 1873 aa16.92■□□□□ 0.3
TMEM55B-206ENST00000556093 CHL1O00533 1208 aa16.91■□□□□ 0.3
TMEM55B-206ENST00000556093 RGL2O15211 777 aa16.91■□□□□ 0.3
TMEM55B-206ENST00000556093 TBC1D9BQ66K14 1250 aa16.91■□□□□ 0.3
TMEM55B-206ENST00000556093 NUP98P52948 1817 aa16.91■□□□□ 0.3
TMEM55B-206ENST00000556093 SERPINB2P05120 415 aa16.9■□□□□ 0.3
TMEM55B-206ENST00000556093 BICDL1Q6ZP65 573 aa16.9■□□□□ 0.3
TMEM55B-206ENST00000556093 ZNF652Q9Y2D9 606 aa16.9■□□□□ 0.3
TMEM55B-206ENST00000556093 A0A0G2JLW4 131 aa16.89■□□□□ 0.29
TMEM55B-206ENST00000556093 DPEP1P16444 411 aa16.89■□□□□ 0.29
TMEM55B-206ENST00000556093 CALD1Q05682 793 aaKnown RBP16.89■□□□□ 0.29
TMEM55B-206ENST00000556093 CLEC4GQ6UXB4 293 aa16.89■□□□□ 0.29
TMEM55B-206ENST00000556093 CFAP44Q96MT7 982 aa16.89■□□□□ 0.29
TMEM55B-206ENST00000556093 WWC3Q9ULE0 1092 aa16.89■□□□□ 0.29
TMEM55B-206ENST00000556093 LAS1LQ9Y4W2 734 aaKnown RBP16.89■□□□□ 0.29
TMEM55B-206ENST00000556093 COL11A2P13942 1736 aaPredicted RBP16.88■□□□□ 0.29
TMEM55B-206ENST00000556093 SETDB2Q96T68 719 aa16.87■□□□□ 0.29
TMEM55B-206ENST00000556093 IFT57Q9NWB7 429 aa16.87■□□□□ 0.29
TMEM55B-206ENST00000556093 HOXB7P09629 217 aa16.86■□□□□ 0.29
TMEM55B-206ENST00000556093 MYL6BP14649 208 aa16.86■□□□□ 0.29
TMEM55B-206ENST00000556093 MBIPQ9NS73 344 aa16.86■□□□□ 0.29
TMEM55B-206ENST00000556093 ATP10DQ9P241 1426 aa16.86■□□□□ 0.29
TMEM55B-206ENST00000556093 ANKRD36CQ5JPF3 1778 aa16.85■□□□□ 0.29
TMEM55B-206ENST00000556093 ZNF853P0CG23 659 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms