RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 CT47A1Q5JQC4 288 aaPredicted RBP17.31■□□□□ 0.36
SIX1-205ENST00000555955 NYAP1Q6ZVC0 841 aa17.31■□□□□ 0.36
SIX1-205ENST00000555955 SMARCE1Q969G3 411 aa17.31■□□□□ 0.36
SIX1-205ENST00000555955 UPF3BQ9BZI7 483 aaKnown RBP17.31■□□□□ 0.36
SIX1-205ENST00000555955 ABCA6Q8N139 1617 aa17.31■□□□□ 0.36
SIX1-205ENST00000555955 BRMS1Q9HCU9 246 aa17.31■□□□□ 0.36
SIX1-205ENST00000555955 CWC15Q9P013 229 aaKnown RBP17.31■□□□□ 0.36
SIX1-205ENST00000555955 CLIP2Q9UDT6 1046 aa17.31■□□□□ 0.36
SIX1-205ENST00000555955 BANK1Q8NDB2 785 aa17.3■□□□□ 0.36
SIX1-205ENST00000555955 RTL1A6NKG5 1358 aa17.3■□□□□ 0.36
SIX1-205ENST00000555955 BRPF1P55201 1214 aaPredicted RBP17.3■□□□□ 0.36
SIX1-205ENST00000555955 DRC1Q96MC2 740 aa17.3■□□□□ 0.36
SIX1-205ENST00000555955 PATL2C9JE40 543 aaKnown RBP17.29■□□□□ 0.36
SIX1-205ENST00000555955 MCCP23508 829 aa17.29■□□□□ 0.36
SIX1-205ENST00000555955 CCDC144BQ3MJ40 725 aa17.29■□□□□ 0.36
SIX1-205ENST00000555955 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.29■□□□□ 0.36
SIX1-205ENST00000555955 PLA2G4DQ86XP0 818 aa17.29■□□□□ 0.36
SIX1-205ENST00000555955 CCDC144CPQ8IYA2 1237 aa17.29■□□□□ 0.36
SIX1-205ENST00000555955 GOLGA6L1Q8N7Z2 621 aa17.29■□□□□ 0.36
SIX1-205ENST00000555955 ARHGAP45Q92619 1136 aa17.29■□□□□ 0.36
SIX1-205ENST00000555955 PLEKHF1Q96S99 279 aa17.29■□□□□ 0.36
SIX1-205ENST00000555955 MRVI1Q9Y6F6 885 aa17.29■□□□□ 0.36
SIX1-205ENST00000555955 SLC12A5Q9H2X9 1139 aa17.29■□□□□ 0.36
SIX1-205ENST00000555955 ATG3Q9NT62 314 aa17.29■□□□□ 0.36
SIX1-205ENST00000555955 TRMT1Q9NXH9 659 aaKnown RBP17.29■□□□□ 0.36
SIX1-205ENST00000555955 EXOC6BQ9Y2D4 811 aa17.29■□□□□ 0.36
SIX1-205ENST00000555955 JRKLQ9Y4A0 524 aa17.29■□□□□ 0.36
SIX1-205ENST00000555955 ATAD2Q6PL18 1390 aa17.29■□□□□ 0.36
SIX1-205ENST00000555955 TYRO3Q06418 890 aa17.29■□□□□ 0.36
SIX1-205ENST00000555955 SART3Q15020 963 aaKnown RBP17.29■□□□□ 0.36
SIX1-205ENST00000555955 DIP2CQ9Y2E4 1556 aa17.29■□□□□ 0.36
SIX1-205ENST00000555955 SRLQ86TD4 932 aa17.28■□□□□ 0.36
SIX1-205ENST00000555955 CBX8Q9HC52 389 aa17.28■□□□□ 0.36
SIX1-205ENST00000555955 ATP6V1DQ9Y5K8 247 aa17.28■□□□□ 0.36
SIX1-205ENST00000555955 PIK3R4Q99570 1358 aa17.28■□□□□ 0.36
SIX1-205ENST00000555955 CAMK4Q16566 473 aa17.28■□□□□ 0.36
SIX1-205ENST00000555955 MRPL50Q8N5N7 158 aaKnown RBP17.28■□□□□ 0.36
SIX1-205ENST00000555955 ZNF622Q969S3 477 aaKnown RBP eCLIP17.28■□□□□ 0.36
SIX1-205ENST00000555955 MAP3K11Q16584 847 aa17.27■□□□□ 0.36
SIX1-205ENST00000555955 LRRC8AQ8IWT6 810 aa17.27■□□□□ 0.36
SIX1-205ENST00000555955 ZNF428Q96B54 188 aa17.27■□□□□ 0.36
SIX1-205ENST00000555955 ZCCHC17Q9NP64 241 aaKnown RBP17.27■□□□□ 0.36
SIX1-205ENST00000555955 RRP15Q9Y3B9 282 aaKnown RBP17.27■□□□□ 0.36
SIX1-205ENST00000555955 STX6O43752 255 aa17.27■□□□□ 0.35
SIX1-205ENST00000555955 CHMP3Q9Y3E7 222 aa17.27■□□□□ 0.35
SIX1-205ENST00000555955 RGS12O14924 1447 aa17.27■□□□□ 0.35
SIX1-205ENST00000555955 IQGAP3Q86VI3 1631 aa17.27■□□□□ 0.35
SIX1-205ENST00000555955 SYT1P21579 422 aa17.26■□□□□ 0.35
SIX1-205ENST00000555955 ANO6Q4KMQ2 910 aa17.26■□□□□ 0.35
SIX1-205ENST00000555955 TMCO3Q6UWJ1 677 aa17.26■□□□□ 0.35
SIX1-205ENST00000555955 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.26■□□□□ 0.35
SIX1-205ENST00000555955 F13A1P00488 732 aa17.26■□□□□ 0.35
SIX1-205ENST00000555955 SKILP12757 684 aa17.26■□□□□ 0.35
SIX1-205ENST00000555955 ARID5BQ14865 1188 aa17.26■□□□□ 0.35
SIX1-205ENST00000555955 ARHGAP29Q52LW3 1261 aa17.26■□□□□ 0.35
SIX1-205ENST00000555955 ABCC4O15439 1325 aa17.25■□□□□ 0.35
SIX1-205ENST00000555955 HAP1P54257 671 aaPredicted RBP17.25■□□□□ 0.35
SIX1-205ENST00000555955 ANAPC15P60006 121 aa17.25■□□□□ 0.35
SIX1-205ENST00000555955 DNM1Q05193 864 aaKnown RBP17.25■□□□□ 0.35
SIX1-205ENST00000555955 RAD50Q92878 1312 aa17.25■□□□□ 0.35
SIX1-205ENST00000555955 A0A1B0GUL7 405 aa17.25■□□□□ 0.35
SIX1-205ENST00000555955 ZRANB2O95218 330 aaKnown RBP eCLIP17.25■□□□□ 0.35
SIX1-205ENST00000555955 ANO2Q9NQ90 1003 aa17.25■□□□□ 0.35
SIX1-205ENST00000555955 CKAP2LQ8IYA6 745 aa17.25■□□□□ 0.35
SIX1-205ENST00000555955 FBXO18Q8NFZ0 1043 aa17.25■□□□□ 0.35
SIX1-205ENST00000555955 NUP62CLQ9H1M0 184 aa17.25■□□□□ 0.35
SIX1-205ENST00000555955 CFAP70Q5T0N1 1121 aa17.24■□□□□ 0.35
SIX1-205ENST00000555955 LRRN4CLQ8ND94 238 aa17.24■□□□□ 0.35
SIX1-205ENST00000555955 ARGLU1Q9NWB6 273 aaPredicted RBP17.24■□□□□ 0.35
SIX1-205ENST00000555955 BCCIPQ9P287 314 aaKnown RBP eCLIP17.24■□□□□ 0.35
SIX1-205ENST00000555955 PTPRTO14522 1441 aa17.24■□□□□ 0.35
SIX1-205ENST00000555955 PTCH1Q13635 1447 aa17.24■□□□□ 0.35
SIX1-205ENST00000555955 VWDEQ8N2E2 1590 aa17.24■□□□□ 0.35
SIX1-205ENST00000555955 ARHGEF40Q8TER5 1519 aa17.24■□□□□ 0.35
SIX1-205ENST00000555955 ELL2O00472 640 aaPredicted RBP17.24■□□□□ 0.35
SIX1-205ENST00000555955 GOLGA5Q8TBA6 731 aa17.24■□□□□ 0.35
SIX1-205ENST00000555955 VAMP4O75379 141 aa17.23■□□□□ 0.35
SIX1-205ENST00000555955 E2F4Q16254 413 aa17.23■□□□□ 0.35
SIX1-205ENST00000555955 TTC31Q49AM3 519 aaPredicted RBP17.23■□□□□ 0.35
SIX1-205ENST00000555955 NOM1Q5C9Z4 860 aaKnown RBP17.23■□□□□ 0.35
SIX1-205ENST00000555955 ESYT1Q9BSJ8 1104 aa17.23■□□□□ 0.35
SIX1-205ENST00000555955 MROH1Q8NDA8 1641 aa17.23■□□□□ 0.35
SIX1-205ENST00000555955 NEMFO60524 1076 aa17.23■□□□□ 0.35
SIX1-205ENST00000555955 MYOM2P54296 1465 aa17.22■□□□□ 0.35
SIX1-205ENST00000555955 OAS2P29728 719 aaKnown RBP17.22■□□□□ 0.35
SIX1-205ENST00000555955 FILIP1Q7Z7B0 1213 aa17.22■□□□□ 0.35
SIX1-205ENST00000555955 CCAR2Q8N163 923 aaKnown RBP17.22■□□□□ 0.35
SIX1-205ENST00000555955 TDRD7Q8NHU6 1098 aaKnown RBP17.22■□□□□ 0.35
SIX1-205ENST00000555955 L2HGDHQ9H9P8 463 aa17.22■□□□□ 0.35
SIX1-205ENST00000555955 KIF2AO00139 706 aaPredicted RBP17.21■□□□□ 0.35
SIX1-205ENST00000555955 PACS2Q86VP3 889 aa17.21■□□□□ 0.35
SIX1-205ENST00000555955 CEP83Q9Y592 693 aa17.21■□□□□ 0.35
SIX1-205ENST00000555955 TSPYL6Q8N831 410 aa17.21■□□□□ 0.35
SIX1-205ENST00000555955 ANKRD44Q8N8A2 993 aa17.21■□□□□ 0.35
SIX1-205ENST00000555955 AK7Q96M32 723 aa17.21■□□□□ 0.35
SIX1-205ENST00000555955 TNMDQ9H2S6 317 aa17.21■□□□□ 0.35
SIX1-205ENST00000555955 DEF6Q9H4E7 631 aa17.21■□□□□ 0.35
SIX1-205ENST00000555955 CCDC172P0C7W6 258 aa17.2■□□□□ 0.34
SIX1-205ENST00000555955 CASTP20810 708 aaKnown RBP17.2■□□□□ 0.34
SIX1-205ENST00000555955 ZNF165P49910 485 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms