RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 C5P01031 1676 aa14.14□□□□□ -0.15
TMEM260-208ENST00000555905 BCAR3O75815 825 aa14.14□□□□□ -0.15
TMEM260-208ENST00000555905 EIF2S2P20042 333 aaKnown RBP14.14□□□□□ -0.15
TMEM260-208ENST00000555905 VSIG10Q8N0Z9 540 aa14.14□□□□□ -0.15
TMEM260-208ENST00000555905 BCL2L13Q9BXK5 485 aa14.14□□□□□ -0.15
TMEM260-208ENST00000555905 CACNA1FO60840 1977 aa14.14□□□□□ -0.15
TMEM260-208ENST00000555905 PALLDQ8WX93 1383 aa14.13□□□□□ -0.15
TMEM260-208ENST00000555905 CANXP27824 592 aaKnown RBP14.13□□□□□ -0.15
TMEM260-208ENST00000555905 NECTIN2Q92692 538 aa14.13□□□□□ -0.15
TMEM260-208ENST00000555905 TEX13AQ9BXU3 409 aaPredicted RBP14.13□□□□□ -0.15
TMEM260-208ENST00000555905 TCERG1O14776 1098 aaKnown RBP14.12□□□□□ -0.15
TMEM260-208ENST00000555905 RRP1P56182 461 aaKnown RBP14.12□□□□□ -0.15
TMEM260-208ENST00000555905 KIF16BQ96L93 1317 aa14.12□□□□□ -0.15
TMEM260-208ENST00000555905 PRAMEF22A3QJZ6 481 aa14.11□□□□□ -0.15
TMEM260-208ENST00000555905 IPO8O15397 1037 aaKnown RBP14.11□□□□□ -0.15
TMEM260-208ENST00000555905 TRIM37O94972 964 aa14.11□□□□□ -0.15
TMEM260-208ENST00000555905 BRPF1P55201 1214 aaPredicted RBP14.11□□□□□ -0.15
TMEM260-208ENST00000555905 MRPL50Q8N5N7 158 aaKnown RBP14.11□□□□□ -0.15
TMEM260-208ENST00000555905 FRAT1Q92837 279 aaPredicted RBP14.11□□□□□ -0.15
TMEM260-208ENST00000555905 DBF4Q9UBU7 674 aaPredicted RBP14.11□□□□□ -0.15
TMEM260-208ENST00000555905 RNF123Q5XPI4 1314 aa14.11□□□□□ -0.15
TMEM260-208ENST00000555905 LOC102724428A0A0B4J2F2 783 aa14.1□□□□□ -0.15
TMEM260-208ENST00000555905 STARD3NLO95772 234 aa14.1□□□□□ -0.15
TMEM260-208ENST00000555905 NEFLP07196 543 aa14.1□□□□□ -0.15
TMEM260-208ENST00000555905 SIK1P57059 783 aa14.1□□□□□ -0.15
TMEM260-208ENST00000555905 PTF1AQ7RTS3 328 aa14.1□□□□□ -0.15
TMEM260-208ENST00000555905 ZNF831Q5JPB2 1677 aa14.1□□□□□ -0.15
TMEM260-208ENST00000555905 ATP6V1AP38606 617 aa14.09□□□□□ -0.15
TMEM260-208ENST00000555905 CHPF2Q9P2E5 772 aa14.09□□□□□ -0.15
TMEM260-208ENST00000555905 USP16Q9Y5T5 823 aa14.09□□□□□ -0.15
TMEM260-208ENST00000555905 TJP1Q07157 1748 aa14.09□□□□□ -0.15
TMEM260-208ENST00000555905 CICQ96RK0 1608 aaPredicted RBP14.08□□□□□ -0.15
TMEM260-208ENST00000555905 LY75O60449 1722 aa14.08□□□□□ -0.16
TMEM260-208ENST00000555905 PLIN1O60240 522 aa14.08□□□□□ -0.16
TMEM260-208ENST00000555905 ZKSCAN2Q63HK3 967 aa14.08□□□□□ -0.16
TMEM260-208ENST00000555905 DNAJC10Q8IXB1 793 aa14.08□□□□□ -0.16
TMEM260-208ENST00000555905 HYPKQ9NX55 129 aa14.08□□□□□ -0.16
TMEM260-208ENST00000555905 NOB1Q9ULX3 412 aaKnown RBP14.08□□□□□ -0.16
TMEM260-208ENST00000555905 ERBB4Q15303 1308 aa14.08□□□□□ -0.16
TMEM260-208ENST00000555905 MS4A1P11836 297 aa14.07□□□□□ -0.16
TMEM260-208ENST00000555905 ARHGAP45Q92619 1136 aa14.07□□□□□ -0.16
TMEM260-208ENST00000555905 SLC4A9Q96Q91 983 aa14.07□□□□□ -0.16
TMEM260-208ENST00000555905 DDX21Q9NR30 783 aaKnown RBP eCLIP14.07□□□□□ -0.16
TMEM260-208ENST00000555905 PTPRCP08575 1304 aa14.07□□□□□ -0.16
TMEM260-208ENST00000555905 EP400Q96L91 3159 aa14.06□□□□□ -0.16
TMEM260-208ENST00000555905 ATF7IPQ6VMQ6 1270 aa14.06□□□□□ -0.16
TMEM260-208ENST00000555905 A1BGP04217 495 aa14.05□□□□□ -0.16
TMEM260-208ENST00000555905 CYP19A1P11511 503 aaPredicted RBP14.05□□□□□ -0.16
TMEM260-208ENST00000555905 MYL6BP14649 208 aa14.05□□□□□ -0.16
TMEM260-208ENST00000555905 HMGB2P26583 209 aaKnown RBP14.05□□□□□ -0.16
TMEM260-208ENST00000555905 FLIIQ13045 1269 aa14.05□□□□□ -0.16
TMEM260-208ENST00000555905 FTSJ3Q8IY81 847 aaKnown RBP14.05□□□□□ -0.16
TMEM260-208ENST00000555905 API5Q9BZZ5 524 aaKnown RBP14.05□□□□□ -0.16
TMEM260-208ENST00000555905 CCNL1Q9UK58 526 aaPredicted RBP14.05□□□□□ -0.16
TMEM260-208ENST00000555905 COL5A3P25940 1745 aaPredicted RBP14.04□□□□□ -0.16
TMEM260-208ENST00000555905 TNS1Q9HBL0 1735 aaKnown RBP14.04□□□□□ -0.16
TMEM260-208ENST00000555905 APBA3O96018 575 aa14.04□□□□□ -0.16
TMEM260-208ENST00000555905 ANXA1P04083 346 aa14.04□□□□□ -0.16
TMEM260-208ENST00000555905 TRIM27P14373 513 aa14.04□□□□□ -0.16
TMEM260-208ENST00000555905 FKBP5Q13451 457 aaPredicted RBP14.04□□□□□ -0.16
TMEM260-208ENST00000555905 ITPK1Q13572 414 aa14.04□□□□□ -0.16
TMEM260-208ENST00000555905 PDE3AQ14432 1141 aa14.04□□□□□ -0.16
TMEM260-208ENST00000555905 PDIA6Q15084 440 aa14.04□□□□□ -0.16
TMEM260-208ENST00000555905 PROSER3Q2NL68 480 aa14.04□□□□□ -0.16
TMEM260-208ENST00000555905 G2E3Q7L622 706 aa14.04□□□□□ -0.16
TMEM260-208ENST00000555905 DDX58O95786 925 aaKnown RBP14.03□□□□□ -0.16
TMEM260-208ENST00000555905 SLC27A3Q5K4L6 730 aa14.03□□□□□ -0.16
TMEM260-208ENST00000555905 DZIP1LQ8IYY4 767 aaKnown RBP14.03□□□□□ -0.16
TMEM260-208ENST00000555905 PHAXQ9H814 394 aaKnown RBP14.03□□□□□ -0.16
TMEM260-208ENST00000555905 CCDC87Q9NVE4 849 aa14.03□□□□□ -0.16
TMEM260-208ENST00000555905 TAF1LQ8IZX4 1826 aa14.02□□□□□ -0.16
TMEM260-208ENST00000555905 RGPD3A6NKT7 1758 aaPredicted RBP14.02□□□□□ -0.16
TMEM260-208ENST00000555905 RGPD4Q7Z3J3 1758 aa14.02□□□□□ -0.16
TMEM260-208ENST00000555905 NBPF26B4DH59 902 aa14.02□□□□□ -0.17
TMEM260-208ENST00000555905 PLSCR1O15162 318 aa14.02□□□□□ -0.17
TMEM260-208ENST00000555905 CRKLP46109 303 aaKnown RBP14.02□□□□□ -0.17
TMEM260-208ENST00000555905 PIP4K2AP48426 406 aaPredicted RBP14.02□□□□□ -0.17
TMEM260-208ENST00000555905 IRX6P78412 446 aaPredicted RBP14.02□□□□□ -0.17
TMEM260-208ENST00000555905 SF3B2Q13435 895 aaKnown RBP14.02□□□□□ -0.17
TMEM260-208ENST00000555905 NBPF14Q5TI25 921 aa14.02□□□□□ -0.17
TMEM260-208ENST00000555905 NBPF10Q6P3W6 841 aaKnown RBP14.02□□□□□ -0.17
TMEM260-208ENST00000555905 NPM2Q86SE8 214 aaKnown RBP14.02□□□□□ -0.17
TMEM260-208ENST00000555905 NBPF15Q8N660 670 aa14.02□□□□□ -0.17
TMEM260-208ENST00000555905 CLUAP1Q96AJ1 413 aa14.02□□□□□ -0.17
TMEM260-208ENST00000555905 RREB1Q92766 1687 aa14.01□□□□□ -0.17
TMEM260-208ENST00000555905 KCNQ4P56696 695 aa14.01□□□□□ -0.17
TMEM260-208ENST00000555905 AIMP1Q12904 312 aaKnown RBP14.01□□□□□ -0.17
TMEM260-208ENST00000555905 C20orf194Q5TEA3 1177 aa14.01□□□□□ -0.17
TMEM260-208ENST00000555905 LINC00116Q8NCU8 138 aa14.01□□□□□ -0.17
TMEM260-208ENST00000555905 PANK1Q8TE04 598 aa14.01□□□□□ -0.17
TMEM260-208ENST00000555905 XAGE3Q8WTP9 111 aa14.01□□□□□ -0.17
TMEM260-208ENST00000555905 CNTNAP4Q9C0A0 1308 aa14□□□□□ -0.17
TMEM260-208ENST00000555905 IL6STP40189 918 aaPredicted RBP14□□□□□ -0.17
TMEM260-208ENST00000555905 MKRN4PQ13434 485 aaPredicted RBP14□□□□□ -0.17
TMEM260-208ENST00000555905 FKBP8Q14318 412 aa14□□□□□ -0.17
TMEM260-208ENST00000555905 RC3H1Q5TC82 1133 aaKnown RBP14□□□□□ -0.17
TMEM260-208ENST00000555905 INTS5Q6P9B9 1019 aaKnown RBP14□□□□□ -0.17
TMEM260-208ENST00000555905 COPS6Q7L5N1 327 aa14□□□□□ -0.17
TMEM260-208ENST00000555905 ZBTB1Q9Y2K1 713 aa14□□□□□ -0.17
TMEM260-208ENST00000555905 ZNF330Q9Y3S2 320 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms