RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 PLCG2P16885 1265 aa9.18□□□□□ -0.94
SLIRP-204ENST00000555890 PDIA6Q15084 440 aa9.18□□□□□ -0.94
SLIRP-204ENST00000555890 C9orf131Q5VYM1 1079 aa9.18□□□□□ -0.94
SLIRP-204ENST00000555890 QRICH2Q9H0J4 1663 aa9.18□□□□□ -0.94
SLIRP-204ENST00000555890 STK26Q9P289 416 aa9.18□□□□□ -0.94
SLIRP-204ENST00000555890 RAPGEFL1Q9UHV5 662 aa9.18□□□□□ -0.94
SLIRP-204ENST00000555890 SBNO2Q9Y2G9 1366 aa9.18□□□□□ -0.94
SLIRP-204ENST00000555890 CRYBG1Q9Y4K1 1723 aa9.18□□□□□ -0.94
SLIRP-204ENST00000555890 ALS2Q96Q42 1657 aa9.17□□□□□ -0.94
SLIRP-204ENST00000555890 UNC79Q9P2D8 2635 aa9.17□□□□□ -0.94
SLIRP-204ENST00000555890 DPYSL4O14531 572 aa9.17□□□□□ -0.94
SLIRP-204ENST00000555890 PANK3Q9H999 370 aa9.17□□□□□ -0.94
SLIRP-204ENST00000555890 TRAK1Q9UPV9 953 aa9.17□□□□□ -0.94
SLIRP-204ENST00000555890 MYBBP1AQ9BQG0 1328 aaKnown RBP9.16□□□□□ -0.94
SLIRP-204ENST00000555890 TMEM132EQ6IEE7 984 aa9.16□□□□□ -0.94
SLIRP-204ENST00000555890 ARHGAP27Q6ZUM4 889 aa9.16□□□□□ -0.94
SLIRP-204ENST00000555890 MINK1Q8N4C8 1332 aaPredicted RBP9.15□□□□□ -0.94
SLIRP-204ENST00000555890 PEAK1Q9H792 1746 aa9.15□□□□□ -0.94
SLIRP-204ENST00000555890 PER1O15534 1290 aaPredicted RBP9.15□□□□□ -0.94
SLIRP-204ENST00000555890 CNGB1Q14028 1251 aaPredicted RBP9.15□□□□□ -0.94
SLIRP-204ENST00000555890 SIRT1Q96EB6 747 aa9.15□□□□□ -0.94
SLIRP-204ENST00000555890 KNSTRNQ9Y448 316 aa9.15□□□□□ -0.94
SLIRP-204ENST00000555890 SBF2Q86WG5 1849 aa9.15□□□□□ -0.95
SLIRP-204ENST00000555890 KNDC1Q76NI1 1749 aa9.14□□□□□ -0.95
SLIRP-204ENST00000555890 TOPAZ1Q8N9V7 1692 aa9.14□□□□□ -0.95
SLIRP-204ENST00000555890 PNPLA7Q6ZV29 1317 aa9.14□□□□□ -0.95
SLIRP-204ENST00000555890 TMC1Q8TDI8 760 aa9.14□□□□□ -0.95
SLIRP-204ENST00000555890 DDRGK1Q96HY6 314 aa9.14□□□□□ -0.95
SLIRP-204ENST00000555890 PUS7Q96PZ0 661 aaKnown RBP9.14□□□□□ -0.95
SLIRP-204ENST00000555890 FAM117AQ9C073 453 aa9.14□□□□□ -0.95
SLIRP-204ENST00000555890 STRN4Q9NRL3 753 aa9.14□□□□□ -0.95
SLIRP-204ENST00000555890 EMILIN3Q9NT22 766 aa9.14□□□□□ -0.95
SLIRP-204ENST00000555890 COL24A1Q17RW2 1714 aa9.14□□□□□ -0.95
SLIRP-204ENST00000555890 BRD4O60885 1362 aaPredicted RBP9.13□□□□□ -0.95
SLIRP-204ENST00000555890 EVC2Q86UK5 1308 aa9.13□□□□□ -0.95
SLIRP-204ENST00000555890 WDR33Q9C0J8 1336 aaKnown RBP9.13□□□□□ -0.95
SLIRP-204ENST00000555890 GPR37O15354 613 aa9.13□□□□□ -0.95
SLIRP-204ENST00000555890 HNRNPUQ00839 825 aaKnown RBP eCLIP9.13□□□□□ -0.95
SLIRP-204ENST00000555890 CHRNA2Q15822 529 aa9.13□□□□□ -0.95
SLIRP-204ENST00000555890 CCDC184Q52MB2 194 aa9.13□□□□□ -0.95
SLIRP-204ENST00000555890 FAM9BQ8IZU0 186 aa9.13□□□□□ -0.95
SLIRP-204ENST00000555890 TCP11L2Q8N4U5 519 aa9.13□□□□□ -0.95
SLIRP-204ENST00000555890 MARVELD3Q96A59 401 aa9.13□□□□□ -0.95
SLIRP-204ENST00000555890 TSKSQ9UJT2 592 aa9.13□□□□□ -0.95
SLIRP-204ENST00000555890 KIAA0232Q92628 1395 aa9.12□□□□□ -0.95
SLIRP-204ENST00000555890 DEFB115Q30KQ5 88 aa9.12□□□□□ -0.95
SLIRP-204ENST00000555890 POGKQ9P215 609 aa9.12□□□□□ -0.95
SLIRP-204ENST00000555890 YTHDC2Q9H6S0 1430 aaKnown RBP9.12□□□□□ -0.95
SLIRP-204ENST00000555890 TMEM88BA6NKF7 163 aa9.11□□□□□ -0.95
SLIRP-204ENST00000555890 CA12O43570 354 aa9.11□□□□□ -0.95
SLIRP-204ENST00000555890 DSG2Q14126 1118 aa9.11□□□□□ -0.95
SLIRP-204ENST00000555890 LARP1Q6PKG0 1096 aaKnown RBP9.11□□□□□ -0.95
SLIRP-204ENST00000555890 NLRP13Q86W25 1043 aa9.11□□□□□ -0.95
SLIRP-204ENST00000555890 PRDM11Q9NQV5 511 aa9.11□□□□□ -0.95
SLIRP-204ENST00000555890 TFCP2L1Q9NZI6 479 aa9.11□□□□□ -0.95
SLIRP-204ENST00000555890 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.11□□□□□ -0.95
SLIRP-204ENST00000555890 UNC80Q8N2C7 3258 aa9.11□□□□□ -0.95
SLIRP-204ENST00000555890 NPC1L1Q9UHC9 1359 aa9.11□□□□□ -0.95
SLIRP-204ENST00000555890 FLIIQ13045 1269 aa9.1□□□□□ -0.95
SLIRP-204ENST00000555890 MAP2K5Q13163 448 aa9.1□□□□□ -0.95
SLIRP-204ENST00000555890 CC2D1BQ5T0F9 858 aaKnown RBP9.1□□□□□ -0.95
SLIRP-204ENST00000555890 SSH2Q76I76 1423 aa9.1□□□□□ -0.95
SLIRP-204ENST00000555890 CACNA1GO43497 2377 aa9.09□□□□□ -0.95
SLIRP-204ENST00000555890 PRR36Q9H6K5 1346 aa9.09□□□□□ -0.95
SLIRP-204ENST00000555890 RASSF10A6NK89 507 aa9.09□□□□□ -0.95
SLIRP-204ENST00000555890 AMHR2Q16671 573 aa9.09□□□□□ -0.95
SLIRP-204ENST00000555890 PNISRQ8TF01 805 aaKnown RBP9.09□□□□□ -0.95
SLIRP-204ENST00000555890 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.09□□□□□ -0.95
SLIRP-204ENST00000555890 THRAP3Q9Y2W1 955 aaKnown RBP9.09□□□□□ -0.95
SLIRP-204ENST00000555890 TNRC6CQ9HCJ0 1690 aaKnown RBP9.09□□□□□ -0.95
SLIRP-204ENST00000555890 PHRF1Q9P1Y6 1649 aaKnown RBP9.09□□□□□ -0.95
SLIRP-204ENST00000555890 PARP4Q9UKK3 1724 aaKnown RBP9.08□□□□□ -0.96
SLIRP-204ENST00000555890 SYNGAP1Q96PV0 1343 aa9.08□□□□□ -0.96
SLIRP-204ENST00000555890 ANKARQ7Z5J8 1434 aa9.08□□□□□ -0.96
SLIRP-204ENST00000555890 PLEKHG3A1L390 1219 aa9.08□□□□□ -0.96
SLIRP-204ENST00000555890 IRF6O14896 467 aa9.08□□□□□ -0.96
SLIRP-204ENST00000555890 EVA1CP58658 441 aa9.08□□□□□ -0.96
SLIRP-204ENST00000555890 ZC3H6P61129 1189 aaKnown RBP9.08□□□□□ -0.96
SLIRP-204ENST00000555890 FOXK1P85037 733 aa9.08□□□□□ -0.96
SLIRP-204ENST00000555890 TRIOBPQ9H2D6 2365 aa9.07□□□□□ -0.96
SLIRP-204ENST00000555890 EMP3P54852 163 aa9.07□□□□□ -0.96
SLIRP-204ENST00000555890 TMC2Q8TDI7 906 aa9.07□□□□□ -0.96
SLIRP-204ENST00000555890 CCDC102AQ96A19 550 aa9.07□□□□□ -0.96
SLIRP-204ENST00000555890 PRAM1Q96QH2 718 aa9.07□□□□□ -0.96
SLIRP-204ENST00000555890 RNF181Q9P0P0 153 aa9.07□□□□□ -0.96
SLIRP-204ENST00000555890 LMO7Q8WWI1 1683 aa9.07□□□□□ -0.96
SLIRP-204ENST00000555890 ZBED9Q6R2W3 1325 aa9.06□□□□□ -0.96
SLIRP-204ENST00000555890 PIEZO1Q92508 2521 aa9.06□□□□□ -0.96
SLIRP-204ENST00000555890 SPTBN5Q9NRC6 3674 aaKnown RBP9.06□□□□□ -0.96
SLIRP-204ENST00000555890 VIRMAQ69YN4 1812 aaKnown RBP9.06□□□□□ -0.96
SLIRP-204ENST00000555890 SRPK2P78362 688 aaKnown RBP9.06□□□□□ -0.96
SLIRP-204ENST00000555890 SAFB2Q14151 953 aaKnown RBP eCLIP9.06□□□□□ -0.96
SLIRP-204ENST00000555890 MSL1Q68DK7 614 aa9.06□□□□□ -0.96
SLIRP-204ENST00000555890 MARCH10Q8NA82 808 aaPredicted RBP9.06□□□□□ -0.96
SLIRP-204ENST00000555890 ARID3AQ99856 593 aa9.06□□□□□ -0.96
SLIRP-204ENST00000555890 GOPCQ9HD26 462 aa9.06□□□□□ -0.96
SLIRP-204ENST00000555890 BCS1LQ9Y276 419 aa9.06□□□□□ -0.96
SLIRP-204ENST00000555890 ATP7BP35670 1465 aa9.06□□□□□ -0.96
SLIRP-204ENST00000555890 PPP2R1AP30153 589 aa9.05□□□□□ -0.96
SLIRP-204ENST00000555890 IRX5P78411 483 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms