RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 SIPA1L3O60292 1781 aaPredicted RBP17.01■□□□□ 0.31
HNRNPC-221ENST00000555883 A0A0G2JLW4 131 aa17■□□□□ 0.31
HNRNPC-221ENST00000555883 POLRMTO00411 1230 aaKnown RBP17■□□□□ 0.31
HNRNPC-221ENST00000555883 DDR1Q08345 913 aa17■□□□□ 0.31
HNRNPC-221ENST00000555883 CNGB1Q14028 1251 aaPredicted RBP17■□□□□ 0.31
HNRNPC-221ENST00000555883 ZBTB1Q9Y2K1 713 aa17■□□□□ 0.31
HNRNPC-221ENST00000555883 HEG1Q9ULI3 1381 aa17■□□□□ 0.31
HNRNPC-221ENST00000555883 DPEP1P16444 411 aa16.99■□□□□ 0.31
HNRNPC-221ENST00000555883 KCNA3P22001 575 aa16.99■□□□□ 0.31
HNRNPC-221ENST00000555883 USPL1Q5W0Q7 1092 aa16.99■□□□□ 0.31
HNRNPC-221ENST00000555883 PHACTR3Q96KR7 559 aa16.99■□□□□ 0.31
HNRNPC-221ENST00000555883 BRCA1P38398 1863 aaKnown RBP16.99■□□□□ 0.31
HNRNPC-221ENST00000555883 N4BP2Q86UW6 1770 aaPredicted RBP16.98■□□□□ 0.31
HNRNPC-221ENST00000555883 ZNF496Q96IT1 587 aaPredicted RBP16.98■□□□□ 0.31
HNRNPC-221ENST00000555883 A0A087WZG4 1122 aa16.97■□□□□ 0.31
HNRNPC-221ENST00000555883 HTATSF1O43719 755 aaKnown RBP16.97■□□□□ 0.31
HNRNPC-221ENST00000555883 U2AF1L5P0DN76 240 aaPredicted RBP16.97■□□□□ 0.31
HNRNPC-221ENST00000555883 EIF5P55010 431 aaKnown RBP16.97■□□□□ 0.31
HNRNPC-221ENST00000555883 U2AF1Q01081 240 aaKnown RBP eCLIP16.97■□□□□ 0.316e-11■■□□□ 14.2
HNRNPC-221ENST00000555883 FMNL2Q96PY5 1086 aa16.97■□□□□ 0.31
HNRNPC-221ENST00000555883 GPBP1L1Q9HC44 474 aaPredicted RBP16.97■□□□□ 0.31
HNRNPC-221ENST00000555883 PIM2Q9P1W9 311 aa16.97■□□□□ 0.31
HNRNPC-221ENST00000555883 BCS1LQ9Y276 419 aa16.97■□□□□ 0.31
HNRNPC-221ENST00000555883 NRXN2Q9P2S2 1712 aa16.96■□□□□ 0.31
HNRNPC-221ENST00000555883 WWC3Q9ULE0 1092 aa16.96■□□□□ 0.31
HNRNPC-221ENST00000555883 IL6STP40189 918 aaPredicted RBP16.95■□□□□ 0.3
HNRNPC-221ENST00000555883 NFIXQ14938 502 aa16.95■□□□□ 0.3
HNRNPC-221ENST00000555883 BCL2L12Q9HB09 334 aa16.95■□□□□ 0.3
HNRNPC-221ENST00000555883 ARFGEF1Q9Y6D6 1849 aa16.94■□□□□ 0.3
HNRNPC-221ENST00000555883 BTBD11A6QL63 1104 aa16.94■□□□□ 0.3
HNRNPC-221ENST00000555883 RTF1Q92541 710 aaKnown RBP16.94■□□□□ 0.3
HNRNPC-221ENST00000555883 CANXP27824 592 aaKnown RBP16.93■□□□□ 0.3
HNRNPC-221ENST00000555883 DALRD3Q5D0E6 543 aaKnown RBP16.93■□□□□ 0.3
HNRNPC-221ENST00000555883 SCN7AQ01118 1682 aa16.92■□□□□ 0.3
HNRNPC-221ENST00000555883 SENP3-EIF4A1A0A087X0R7 540 aa16.92■□□□□ 0.3
HNRNPC-221ENST00000555883 SERPINB2P05120 415 aa16.91■□□□□ 0.3
HNRNPC-221ENST00000555883 ARHGAP27Q6ZUM4 889 aa16.91■□□□□ 0.3
HNRNPC-221ENST00000555883 CEP350Q5VT06 3117 aa16.9■□□□□ 0.3
HNRNPC-221ENST00000555883 PDZRN3Q9UPQ7 1066 aa16.9■□□□□ 0.3
HNRNPC-221ENST00000555883 RGL2O15211 777 aa16.89■□□□□ 0.29
HNRNPC-221ENST00000555883 NEFMP07197 916 aa16.89■□□□□ 0.29
HNRNPC-221ENST00000555883 CHRNA5P30532 468 aa16.89■□□□□ 0.29
HNRNPC-221ENST00000555883 MCM10Q7L590 875 aa16.89■□□□□ 0.29
HNRNPC-221ENST00000555883 AFDNP55196 1824 aaKnown RBP16.89■□□□□ 0.29
HNRNPC-221ENST00000555883 KCNQ3O43525 872 aa16.88■□□□□ 0.29
HNRNPC-221ENST00000555883 SNRPA1P09661 255 aaKnown RBP16.88■□□□□ 0.29
HNRNPC-221ENST00000555883 NPM2Q86SE8 214 aaKnown RBP16.88■□□□□ 0.29
HNRNPC-221ENST00000555883 CARMIL3Q8ND23 1372 aa16.88■□□□□ 0.29
HNRNPC-221ENST00000555883 DLEC1Q9Y238 1755 aa16.87■□□□□ 0.29
HNRNPC-221ENST00000555883 A1BGP04217 495 aa16.87■□□□□ 0.29
HNRNPC-221ENST00000555883 PLEKHF1Q96S99 279 aa16.87■□□□□ 0.29
HNRNPC-221ENST00000555883 PNNQ9H307 717 aaKnown RBP16.87■□□□□ 0.29
HNRNPC-221ENST00000555883 KIF3CO14782 793 aa16.86■□□□□ 0.29
HNRNPC-221ENST00000555883 CAMTA2O94983 1202 aa16.86■□□□□ 0.29
HNRNPC-221ENST00000555883 TAF7Q15545 349 aaPredicted RBP16.86■□□□□ 0.29
HNRNPC-221ENST00000555883 TBC1D9BQ66K14 1250 aa16.86■□□□□ 0.29
HNRNPC-221ENST00000555883 CLEC4GQ6UXB4 293 aa16.86■□□□□ 0.29
HNRNPC-221ENST00000555883 PNISRQ8TF01 805 aaKnown RBP16.86■□□□□ 0.29
HNRNPC-221ENST00000555883 ZNF526Q8TF50 670 aaPredicted RBP16.86■□□□□ 0.29
HNRNPC-221ENST00000555883 USP16Q9Y5T5 823 aa16.86■□□□□ 0.29
HNRNPC-221ENST00000555883 RALBP1Q15311 655 aa16.85■□□□□ 0.29
HNRNPC-221ENST00000555883 C9orf131Q5VYM1 1079 aa16.85■□□□□ 0.29
HNRNPC-221ENST00000555883 BRIP1Q9BX63 1249 aa16.85■□□□□ 0.29
HNRNPC-221ENST00000555883 TBC1D2BQ9UPU7 963 aa16.85■□□□□ 0.29
HNRNPC-221ENST00000555883 ZC3H4Q9UPT8 1303 aaKnown RBP16.85■□□□□ 0.29
HNRNPC-221ENST00000555883 BCORQ6W2J9 1755 aa16.84■□□□□ 0.29
HNRNPC-221ENST00000555883 H0YIN7 160 aa16.84■□□□□ 0.29
HNRNPC-221ENST00000555883 PDE6BP35913 854 aa16.84■□□□□ 0.29
HNRNPC-221ENST00000555883 DCTN1Q14203 1278 aa16.84■□□□□ 0.29
HNRNPC-221ENST00000555883 DZIP3Q86Y13 1208 aaKnown RBP16.84■□□□□ 0.29
HNRNPC-221ENST00000555883 TTLL6Q8N841 843 aa16.84■□□□□ 0.29
HNRNPC-221ENST00000555883 PRR5LQ6MZQ0 368 aa16.83■□□□□ 0.28
HNRNPC-221ENST00000555883 BICDL1Q6ZP65 573 aa16.83■□□□□ 0.28
HNRNPC-221ENST00000555883 C2CD5Q86YS7 1000 aa16.83■□□□□ 0.28
HNRNPC-221ENST00000555883 SETDB2Q96T68 719 aa16.83■□□□□ 0.28
HNRNPC-221ENST00000555883 ZNF330Q9Y3S2 320 aaPredicted RBP16.83■□□□□ 0.28
HNRNPC-221ENST00000555883 HSPA6P17066 643 aa16.82■□□□□ 0.28
HNRNPC-221ENST00000555883 NFE2L2Q16236 605 aa16.82■□□□□ 0.28
HNRNPC-221ENST00000555883 ZNF652Q9Y2D9 606 aa16.82■□□□□ 0.28
HNRNPC-221ENST00000555883 PRAMEF22A3QJZ6 481 aa16.81■□□□□ 0.28
HNRNPC-221ENST00000555883 TOMM70O94826 608 aa16.81■□□□□ 0.28
HNRNPC-221ENST00000555883 CNBD1Q8NA66 436 aa16.81■□□□□ 0.28
HNRNPC-221ENST00000555883 RNF181Q9P0P0 153 aa16.81■□□□□ 0.28
HNRNPC-221ENST00000555883 LAMB4A4D0S4 1761 aa16.8■□□□□ 0.28
HNRNPC-221ENST00000555883 KDM2BQ8NHM5 1336 aa16.8■□□□□ 0.28
HNRNPC-221ENST00000555883 MAPK8IP3Q9UPT6 1336 aa16.8■□□□□ 0.28
HNRNPC-221ENST00000555883 ANKRD31Q8N7Z5 1873 aa16.8■□□□□ 0.28
HNRNPC-221ENST00000555883 KDM3BQ7LBC6 1761 aa16.79■□□□□ 0.28
HNRNPC-221ENST00000555883 NBPF26B4DH59 902 aa16.79■□□□□ 0.28
HNRNPC-221ENST00000555883 LMNB1P20700 586 aa16.79■□□□□ 0.28
HNRNPC-221ENST00000555883 ST5P78524 1137 aa16.79■□□□□ 0.28
HNRNPC-221ENST00000555883 NBPF10Q6P3W6 841 aaKnown RBP16.79■□□□□ 0.28
HNRNPC-221ENST00000555883 NBPF15Q8N660 670 aa16.79■□□□□ 0.28
HNRNPC-221ENST00000555883 DLG5Q8TDM6 1919 aa16.78■□□□□ 0.28
HNRNPC-221ENST00000555883 EIF4A1P60842 406 aaKnown RBP16.77■□□□□ 0.28
HNRNPC-221ENST00000555883 STYK1Q6J9G0 422 aa16.77■□□□□ 0.28
HNRNPC-221ENST00000555883 NMRK2Q9NPI5 230 aa16.77■□□□□ 0.28
HNRNPC-221ENST00000555883 BABAM1Q9NWV8 329 aa16.77■□□□□ 0.28
HNRNPC-221ENST00000555883 SBF1O95248 1867 aa16.77■□□□□ 0.27
HNRNPC-221ENST00000555883 COL11A2P13942 1736 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms