RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 TLR1Q15399 786 aa4.75□□□□□ -1.65
MTHFD1-212ENST00000555858 TSNAXIP1Q2TAA8 658 aa4.75□□□□□ -1.65
MTHFD1-212ENST00000555858 ESYT1Q9BSJ8 1104 aa4.75□□□□□ -1.65
MTHFD1-212ENST00000555858 QTRT2Q9H974 415 aaKnown RBP4.75□□□□□ -1.65
MTHFD1-212ENST00000555858 RAB6BQ9NRW1 208 aa4.75□□□□□ -1.65
MTHFD1-212ENST00000555858 CCDC87Q9NVE4 849 aa4.75□□□□□ -1.65
MTHFD1-212ENST00000555858 SERTM1A2A2V5 107 aa4.74□□□□□ -1.65
MTHFD1-212ENST00000555858 PRPF40AO75400 957 aaKnown RBP4.74□□□□□ -1.65
MTHFD1-212ENST00000555858 ADH1AP07327 375 aa4.74□□□□□ -1.65
MTHFD1-212ENST00000555858 BRD2P25440 801 aaKnown RBP4.74□□□□□ -1.65
MTHFD1-212ENST00000555858 HIRAP54198 1017 aaPredicted RBP4.74□□□□□ -1.65
MTHFD1-212ENST00000555858 XPCQ01831 940 aaPredicted RBP4.74□□□□□ -1.65
MTHFD1-212ENST00000555858 EHHADHQ08426 723 aa4.74□□□□□ -1.65
MTHFD1-212ENST00000555858 TEAD4Q15561 434 aa4.74□□□□□ -1.65
MTHFD1-212ENST00000555858 CDAN1Q8IWY9 1227 aa4.74□□□□□ -1.65
MTHFD1-212ENST00000555858 CNKSR1Q969H4 720 aa4.74□□□□□ -1.65
MTHFD1-212ENST00000555858 FAM129BQ96TA1 746 aa4.74□□□□□ -1.65
MTHFD1-212ENST00000555858 LRFN2Q9ULH4 789 aa4.74□□□□□ -1.65
MTHFD1-212ENST00000555858 IQSEC3Q9UPP2 1182 aaPredicted RBP4.74□□□□□ -1.65
MTHFD1-212ENST00000555858 HRH3Q9Y5N1 445 aa4.74□□□□□ -1.65
MTHFD1-212ENST00000555858 EML1O00423 815 aa4.73□□□□□ -1.65
MTHFD1-212ENST00000555858 IGHA2P01877 340 aa4.73□□□□□ -1.65
MTHFD1-212ENST00000555858 LDHBP07195 334 aaKnown RBP4.73□□□□□ -1.65
MTHFD1-212ENST00000555858 MAPK8P45983 427 aa4.73□□□□□ -1.65
MTHFD1-212ENST00000555858 ZC3H6P61129 1189 aaKnown RBP4.73□□□□□ -1.65
MTHFD1-212ENST00000555858 CLN3Q13286 438 aa4.73□□□□□ -1.65
MTHFD1-212ENST00000555858 LIAT1Q6ZQX7 453 aa4.73□□□□□ -1.65
MTHFD1-212ENST00000555858 ALKBH8Q96BT7 664 aaKnown RBP4.73□□□□□ -1.65
MTHFD1-212ENST00000555858 NGLY1Q96IV0 654 aa4.73□□□□□ -1.65
MTHFD1-212ENST00000555858 MRGPRX2Q96LB1 330 aa4.73□□□□□ -1.65
MTHFD1-212ENST00000555858 BACH2Q9BYV9 841 aa4.73□□□□□ -1.65
MTHFD1-212ENST00000555858 USP3Q9Y6I4 520 aa4.73□□□□□ -1.65
MTHFD1-212ENST00000555858 SCAMP3O14828 347 aaKnown RBP4.72□□□□□ -1.65
MTHFD1-212ENST00000555858 GPR182O15218 404 aa4.72□□□□□ -1.65
MTHFD1-212ENST00000555858 NOS2P35228 1153 aa4.72□□□□□ -1.65
MTHFD1-212ENST00000555858 USP5P45974 858 aa4.72□□□□□ -1.65
MTHFD1-212ENST00000555858 ATP2B2Q01814 1243 aa4.72□□□□□ -1.65
MTHFD1-212ENST00000555858 RTN1Q16799 776 aa4.72□□□□□ -1.65
MTHFD1-212ENST00000555858 C11orf91Q3C1V1 193 aa4.72□□□□□ -1.65
MTHFD1-212ENST00000555858 ALDH16A1Q8IZ83 802 aa4.72□□□□□ -1.65
MTHFD1-212ENST00000555858 GJD3Q8N144 294 aa4.72□□□□□ -1.65
MTHFD1-212ENST00000555858 FHDC1Q9C0D6 1143 aaPredicted RBP4.72□□□□□ -1.65
MTHFD1-212ENST00000555858 MRS2Q9HD23 443 aa4.72□□□□□ -1.65
MTHFD1-212ENST00000555858 CABP1Q9NZU7 370 aa4.72□□□□□ -1.65
MTHFD1-212ENST00000555858 PARP2Q9UGN5 583 aa4.72□□□□□ -1.65
MTHFD1-212ENST00000555858 ZNF232Q9UNY5 417 aa4.72□□□□□ -1.65
MTHFD1-212ENST00000555858 ZBTB39O15060 712 aa4.71□□□□□ -1.66
MTHFD1-212ENST00000555858 MZF1P28698 734 aaPredicted RBP4.71□□□□□ -1.66
MTHFD1-212ENST00000555858 ERCC5P28715 1186 aaPredicted RBP4.71□□□□□ -1.66
MTHFD1-212ENST00000555858 CENPCQ03188 943 aa4.71□□□□□ -1.66
MTHFD1-212ENST00000555858 NNTQ13423 1086 aa4.71□□□□□ -1.66
MTHFD1-212ENST00000555858 DGKZQ13574 1117 aa4.71□□□□□ -1.66
MTHFD1-212ENST00000555858 SH3PXD2AQ5TCZ1 1133 aa4.71□□□□□ -1.66
MTHFD1-212ENST00000555858 TMC4Q7Z404 712 aa4.71□□□□□ -1.66
MTHFD1-212ENST00000555858 ATCAYQ86WG3 371 aa4.71□□□□□ -1.66
MTHFD1-212ENST00000555858 ZNF295-AS1Q8N0V1 137 aa4.71□□□□□ -1.66
MTHFD1-212ENST00000555858 KDF1Q8NAX2 398 aaPredicted RBP4.71□□□□□ -1.66
MTHFD1-212ENST00000555858 ZDHHC1Q8WTX9 485 aa4.71□□□□□ -1.66
MTHFD1-212ENST00000555858 SREK1Q8WXA9 508 aaKnown RBP4.71□□□□□ -1.66
MTHFD1-212ENST00000555858 L3MBTL2Q969R5 705 aa4.71□□□□□ -1.66
MTHFD1-212ENST00000555858 EMID1Q96A84 441 aaPredicted RBP4.71□□□□□ -1.66
MTHFD1-212ENST00000555858 DRC1Q96MC2 740 aa4.71□□□□□ -1.66
MTHFD1-212ENST00000555858 NLRP3Q96P20 1036 aa4.71□□□□□ -1.66
MTHFD1-212ENST00000555858 DUSP9Q99956 384 aaKnown RBP4.71□□□□□ -1.66
MTHFD1-212ENST00000555858 POLIQ9UNA4 740 aa4.71□□□□□ -1.66
MTHFD1-212ENST00000555858 HCN4Q9Y3Q4 1203 aa4.71□□□□□ -1.66
MTHFD1-212ENST00000555858 SORBS3O60504 671 aa4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 ALDH1A1P00352 501 aa4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 PDGFAP04085 211 aa4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 PCSK2P16519 638 aa4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 SLC19A1P41440 591 aa4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 PTGIRP43119 386 aa4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 ZAP70P43403 619 aa4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 DAB2P98082 770 aa4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 DNM1Q05193 864 aaKnown RBP4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 CBLBQ13191 982 aa4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 ENOX2Q16206 610 aaKnown RBP4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 FAM26DQ5JW98 314 aa4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 ALG1LQ6GMV1 187 aa4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 Q6ZVU0 165 aa4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 PPARGC1BQ86YN6 1023 aaKnown RBP4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 ETFBKMTQ8IXQ9 262 aa4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 RNF166Q96A37 237 aaPredicted RBP4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 IFT43Q96FT9 208 aa4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 NIFKQ9BYG3 293 aaKnown RBP4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 PHACTR1Q9C0D0 580 aa4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 NIF3L1Q9GZT8 377 aa4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 WASF2Q9Y6W5 498 aa4.7□□□□□ -1.66
MTHFD1-212ENST00000555858 PNMA6FA0A0J9YX94 578 aa4.69□□□□□ -1.66
MTHFD1-212ENST00000555858 MEN1O00255 615 aa4.69□□□□□ -1.66
MTHFD1-212ENST00000555858 GTF2E1P29083 439 aaPredicted RBP4.69□□□□□ -1.66
MTHFD1-212ENST00000555858 HDLBPQ00341 1268 aaKnown RBP4.69□□□□□ -1.66
MTHFD1-212ENST00000555858 PSMD2Q13200 908 aa4.69□□□□□ -1.66
MTHFD1-212ENST00000555858 NAALADL2Q58DX5 795 aa4.69□□□□□ -1.66
MTHFD1-212ENST00000555858 LDLRAD1Q5T700 205 aa4.69□□□□□ -1.66
MTHFD1-212ENST00000555858 C1orf53Q5VUE5 145 aa4.69□□□□□ -1.66
MTHFD1-212ENST00000555858 TMEM87AQ8NBN3 555 aa4.69□□□□□ -1.66
MTHFD1-212ENST00000555858 EDEM1Q92611 657 aa4.69□□□□□ -1.66
MTHFD1-212ENST00000555858 FAM161BQ96MY7 647 aa4.69□□□□□ -1.66
MTHFD1-212ENST00000555858 ZSCAN10Q96SZ4 725 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms