RNA–Protein interactions for RNA: ENST00000555801.1

LINC00640-202, long intergenic non-protein coding RNA 640, humanhuman

TSL 3

Gene LINC00640, Length 392 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-202ENST00000555801 QRICH2Q9H0J4 1663 aa6.23□□□□□ -1.41
LINC00640-202ENST00000555801 LY75O60449 1722 aa6.22□□□□□ -1.41
LINC00640-202ENST00000555801 USP47Q96K76 1375 aa6.22□□□□□ -1.41
LINC00640-202ENST00000555801 DDNO94850 711 aaPredicted RBP6.22□□□□□ -1.41
LINC00640-202ENST00000555801 ITGBL1O95965 494 aaPredicted RBP6.22□□□□□ -1.41
LINC00640-202ENST00000555801 LMNB1P20700 586 aa6.22□□□□□ -1.41
LINC00640-202ENST00000555801 DPY19L2Q6NUT2 758 aa6.22□□□□□ -1.41
LINC00640-202ENST00000555801 LTBP1Q14766 1721 aa6.22□□□□□ -1.41
LINC00640-202ENST00000555801 HMGB2P26583 209 aaKnown RBP6.21□□□□□ -1.42
LINC00640-202ENST00000555801 CCDC87Q9NVE4 849 aa6.21□□□□□ -1.42
LINC00640-202ENST00000555801 CPSF1Q10570 1443 aaKnown RBP6.21□□□□□ -1.42
LINC00640-202ENST00000555801 C5P01031 1676 aa6.2□□□□□ -1.42
LINC00640-202ENST00000555801 ANKRD36BQ8N2N9 1353 aa6.2□□□□□ -1.42
LINC00640-202ENST00000555801 DOT1LQ8TEK3 1739 aa6.2□□□□□ -1.42
LINC00640-202ENST00000555801 TOGARAM1Q9Y4F4 1720 aa6.2□□□□□ -1.42
LINC00640-202ENST00000555801 AMER1Q5JTC6 1135 aaPredicted RBP6.2□□□□□ -1.42
LINC00640-202ENST00000555801 MAP1SQ66K74 1059 aaPredicted RBP6.2□□□□□ -1.42
LINC00640-202ENST00000555801 ARHGEF25Q86VW2 580 aa6.2□□□□□ -1.42
LINC00640-202ENST00000555801 LDHDQ86WU2 507 aa6.2□□□□□ -1.42
LINC00640-202ENST00000555801 CENPJQ9HC77 1338 aaPredicted RBP6.2□□□□□ -1.42
LINC00640-202ENST00000555801 ARFGEF1Q9Y6D6 1849 aa6.2□□□□□ -1.42
LINC00640-202ENST00000555801 BRCA1P38398 1863 aaKnown RBP6.19□□□□□ -1.42
LINC00640-202ENST00000555801 GNPATO15228 680 aa6.19□□□□□ -1.42
LINC00640-202ENST00000555801 CABP1Q9NZU7 370 aa6.19□□□□□ -1.42
LINC00640-202ENST00000555801 KIF13BQ9NQT8 1826 aa6.19□□□□□ -1.42
LINC00640-202ENST00000555801 ZC3H4Q9UPT8 1303 aaKnown RBP6.19□□□□□ -1.42
LINC00640-202ENST00000555801 TIAM2Q8IVF5 1701 aa6.19□□□□□ -1.42
LINC00640-202ENST00000555801 PALLDQ8WX93 1383 aa6.18□□□□□ -1.42
LINC00640-202ENST00000555801 ECE1P42892 770 aa6.18□□□□□ -1.42
LINC00640-202ENST00000555801 IRX5P78411 483 aaPredicted RBP6.18□□□□□ -1.42
LINC00640-202ENST00000555801 CIAPIN1Q6FI81 312 aa6.18□□□□□ -1.42
LINC00640-202ENST00000555801 CNTROBQ8N137 903 aa6.18□□□□□ -1.42
LINC00640-202ENST00000555801 CABP2Q9NPB3 220 aa6.18□□□□□ -1.42
LINC00640-202ENST00000555801 RAPGEFL1Q9UHV5 662 aa6.18□□□□□ -1.42
LINC00640-202ENST00000555801 PARP3Q9Y6F1 533 aa6.18□□□□□ -1.42
LINC00640-202ENST00000555801 C4BP0C0L5 1744 aa6.18□□□□□ -1.42
LINC00640-202ENST00000555801 TTC21AQ8NDW8 1320 aa6.18□□□□□ -1.42
LINC00640-202ENST00000555801 KDM6AO15550 1401 aaPredicted RBP6.17□□□□□ -1.42
LINC00640-202ENST00000555801 TRIOBPQ9H2D6 2365 aa6.17□□□□□ -1.42
LINC00640-202ENST00000555801 ADAMTS7Q9UKP4 1686 aa6.17□□□□□ -1.42
LINC00640-202ENST00000555801 SLIT3O75094 1523 aa6.17□□□□□ -1.42
LINC00640-202ENST00000555801 MEGF6O75095 1541 aa6.17□□□□□ -1.42
LINC00640-202ENST00000555801 NFKBIEO00221 500 aa6.17□□□□□ -1.42
LINC00640-202ENST00000555801 SSFA2P28290 1259 aa6.17□□□□□ -1.42
LINC00640-202ENST00000555801 TMF1P82094 1093 aa6.17□□□□□ -1.42
LINC00640-202ENST00000555801 ERFEQ4G0M1 354 aa6.17□□□□□ -1.42
LINC00640-202ENST00000555801 MPRIPQ6WCQ1 1025 aa6.17□□□□□ -1.42
LINC00640-202ENST00000555801 LINC00116Q8NCU8 138 aa6.17□□□□□ -1.42
LINC00640-202ENST00000555801 COL25A1Q9BXS0 654 aaPredicted RBP6.17□□□□□ -1.42
LINC00640-202ENST00000555801 TAF1DQ9H5J8 278 aaPredicted RBP6.17□□□□□ -1.42
LINC00640-202ENST00000555801 HPS5Q9UPZ3 1129 aa6.17□□□□□ -1.42
LINC00640-202ENST00000555801 EVC2Q86UK5 1308 aa6.17□□□□□ -1.42
LINC00640-202ENST00000555801 CCDC88AQ3V6T2 1871 aa6.16□□□□□ -1.42
LINC00640-202ENST00000555801 UBR3Q6ZT12 1888 aa6.16□□□□□ -1.42
LINC00640-202ENST00000555801 NBPF1Q3BBV0 1214 aa6.16□□□□□ -1.42
LINC00640-202ENST00000555801 ANKRD24Q8TF21 1146 aa6.16□□□□□ -1.42
LINC00640-202ENST00000555801 LTV1Q96GA3 475 aaPredicted RBP6.16□□□□□ -1.42
LINC00640-202ENST00000555801 ZIC5Q96T25 663 aa6.16□□□□□ -1.42
LINC00640-202ENST00000555801 OCEL1Q9H607 264 aa6.16□□□□□ -1.42
LINC00640-202ENST00000555801 TTC21BQ7Z4L5 1316 aa6.16□□□□□ -1.42
LINC00640-202ENST00000555801 TAF1LQ8IZX4 1826 aa6.15□□□□□ -1.42
LINC00640-202ENST00000555801 SZT2Q5T011 3432 aa6.15□□□□□ -1.42
LINC00640-202ENST00000555801 TRAF5O00463 557 aa6.15□□□□□ -1.42
LINC00640-202ENST00000555801 PCGF6Q9BYE7 350 aa6.15□□□□□ -1.42
LINC00640-202ENST00000555801 DDX21Q9NR30 783 aaKnown RBP eCLIP6.15□□□□□ -1.42
LINC00640-202ENST00000555801 A0A0C4DFX4 3053 aa6.15□□□□□ -1.43
LINC00640-202ENST00000555801 RAB3GAP2Q9H2M9 1393 aa6.15□□□□□ -1.43
LINC00640-202ENST00000555801 THSD7BQ9C0I4 1608 aa6.14□□□□□ -1.43
LINC00640-202ENST00000555801 CA12O43570 354 aa6.14□□□□□ -1.43
LINC00640-202ENST00000555801 MAP2K2P36507 400 aa6.14□□□□□ -1.43
LINC00640-202ENST00000555801 NLGN1Q8N2Q7 840 aa6.14□□□□□ -1.43
LINC00640-202ENST00000555801 C4AP0C0L4 1744 aa6.13□□□□□ -1.43
LINC00640-202ENST00000555801 IQCA1LA6NCM1 817 aa6.13□□□□□ -1.43
LINC00640-202ENST00000555801 GYS1P13807 737 aa6.13□□□□□ -1.43
LINC00640-202ENST00000555801 COL9A1P20849 921 aa6.13□□□□□ -1.43
LINC00640-202ENST00000555801 EPHX2P34913 555 aa6.13□□□□□ -1.43
LINC00640-202ENST00000555801 ITPK1Q13572 414 aa6.13□□□□□ -1.43
LINC00640-202ENST00000555801 TMEM106CQ9BVX2 250 aa6.13□□□□□ -1.43
LINC00640-202ENST00000555801 KTN1Q86UP2 1357 aaKnown RBP6.13□□□□□ -1.43
LINC00640-202ENST00000555801 NSD3Q9BZ95 1437 aa6.13□□□□□ -1.43
LINC00640-202ENST00000555801 BRPF1P55201 1214 aaPredicted RBP6.12□□□□□ -1.43
LINC00640-202ENST00000555801 DDR1Q08345 913 aa6.12□□□□□ -1.43
LINC00640-202ENST00000555801 TRAPPC3LQ5T215 181 aa6.12□□□□□ -1.43
LINC00640-202ENST00000555801 CST9Q5W186 159 aa6.12□□□□□ -1.43
LINC00640-202ENST00000555801 CTU1Q7Z7A3 348 aaKnown RBP6.12□□□□□ -1.43
LINC00640-202ENST00000555801 CCDC24Q8N4L8 307 aa6.12□□□□□ -1.43
LINC00640-202ENST00000555801 ZCRB1Q8TBF4 217 aaKnown RBP6.12□□□□□ -1.43
LINC00640-202ENST00000555801 ARHGEF1Q92888 912 aaKnown RBP6.12□□□□□ -1.43
LINC00640-202ENST00000555801 PLA2G2EQ9NZK7 142 aa6.12□□□□□ -1.43
LINC00640-202ENST00000555801 PCDHB13Q9Y5F0 798 aa6.12□□□□□ -1.43
LINC00640-202ENST00000555801 RNF123Q5XPI4 1314 aa6.11□□□□□ -1.43
LINC00640-202ENST00000555801 LOC102724428A0A0B4J2F2 783 aa6.11□□□□□ -1.43
LINC00640-202ENST00000555801 C21orf2O43822 256 aa6.11□□□□□ -1.43
LINC00640-202ENST00000555801 TRPA1O75762 1119 aa6.11□□□□□ -1.43
LINC00640-202ENST00000555801 SIK1P57059 783 aa6.11□□□□□ -1.43
LINC00640-202ENST00000555801 HDGFL2Q7Z4V5 671 aaPredicted RBP6.11□□□□□ -1.43
LINC00640-202ENST00000555801 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.11□□□□□ -1.43
LINC00640-202ENST00000555801 SYNE4Q8N205 404 aa6.11□□□□□ -1.43
LINC00640-202ENST00000555801 SRP68Q9UHB9 627 aaKnown RBP6.11□□□□□ -1.43
LINC00640-202ENST00000555801 HACL1Q9UJ83 578 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms