RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 ABHD8Q96I13 439 aa15.48■□□□□ 0.07
MTHFD1-211ENST00000555709 PNNQ9H307 717 aaKnown RBP15.48■□□□□ 0.07
MTHFD1-211ENST00000555709 MKRN1Q9UHC7 482 aaKnown RBP15.48■□□□□ 0.07
MTHFD1-211ENST00000555709 DLG5Q8TDM6 1919 aa15.48■□□□□ 0.07
MTHFD1-211ENST00000555709 GLTPD2A6NH11 291 aa15.47■□□□□ 0.07
MTHFD1-211ENST00000555709 DALRD3Q5D0E6 543 aaKnown RBP15.47■□□□□ 0.07
MTHFD1-211ENST00000555709 PHACTR3Q96KR7 559 aa15.47■□□□□ 0.07
MTHFD1-211ENST00000555709 CREBZFQ9NS37 354 aa15.47■□□□□ 0.07
MTHFD1-211ENST00000555709 MAPK8IP3Q9UPT6 1336 aa15.46■□□□□ 0.07
MTHFD1-211ENST00000555709 POTECB2RU33 542 aa15.46■□□□□ 0.07
MTHFD1-211ENST00000555709 CTCFP49711 727 aaPredicted RBP15.46■□□□□ 0.07
MTHFD1-211ENST00000555709 RGS19P49795 217 aa15.46■□□□□ 0.07
MTHFD1-211ENST00000555709 RAPGEF4Q8WZA2 1011 aa15.46■□□□□ 0.07
MTHFD1-211ENST00000555709 APAF1O14727 1248 aa15.45■□□□□ 0.06
MTHFD1-211ENST00000555709 HNRNPUQ00839 825 aaKnown RBP eCLIP15.45■□□□□ 0.06
MTHFD1-211ENST00000555709 MLLT1Q03111 559 aaPredicted RBP15.45■□□□□ 0.06
MTHFD1-211ENST00000555709 GYS1P13807 737 aa15.44■□□□□ 0.06
MTHFD1-211ENST00000555709 TATP17735 454 aaPredicted RBP15.44■□□□□ 0.06
MTHFD1-211ENST00000555709 YTHDC1Q96MU7 727 aaKnown RBP15.44■□□□□ 0.06
MTHFD1-211ENST00000555709 CNTNAP1P78357 1384 aa15.44■□□□□ 0.06
MTHFD1-211ENST00000555709 RASSF7Q02833 373 aa15.43■□□□□ 0.06
MTHFD1-211ENST00000555709 NCBP3Q53F19 620 aaKnown RBP15.43■□□□□ 0.06
MTHFD1-211ENST00000555709 TRAPPC3LQ5T215 181 aa15.43■□□□□ 0.06
MTHFD1-211ENST00000555709 ZBED9Q6R2W3 1325 aa15.43■□□□□ 0.06
MTHFD1-211ENST00000555709 ADAMTS7Q9UKP4 1686 aa15.42■□□□□ 0.06
MTHFD1-211ENST00000555709 ATP6V1AP38606 617 aa15.42■□□□□ 0.06
MTHFD1-211ENST00000555709 TMPOP42166 694 aaKnown RBP15.42■□□□□ 0.06
MTHFD1-211ENST00000555709 LBX1P52954 281 aa15.42■□□□□ 0.06
MTHFD1-211ENST00000555709 NKX1-1Q15270 411 aaPredicted RBP15.42■□□□□ 0.06
MTHFD1-211ENST00000555709 NFE2L2Q16236 605 aa15.42■□□□□ 0.06
MTHFD1-211ENST00000555709 ARHGEF1Q92888 912 aaKnown RBP15.42■□□□□ 0.06
MTHFD1-211ENST00000555709 ASAP1Q9ULH1 1129 aa15.42■□□□□ 0.06
MTHFD1-211ENST00000555709 PARP3Q9Y6F1 533 aa15.42■□□□□ 0.06
MTHFD1-211ENST00000555709 NEFMP07197 916 aa15.41■□□□□ 0.06
MTHFD1-211ENST00000555709 CHRNA5P30532 468 aa15.41■□□□□ 0.06
MTHFD1-211ENST00000555709 MTHFSDQ2M296 383 aaKnown RBP15.41■□□□□ 0.06
MTHFD1-211ENST00000555709 NGEFQ8N5V2 710 aa15.41■□□□□ 0.06
MTHFD1-211ENST00000555709 WBP1LQ9NX94 342 aa15.41■□□□□ 0.06
MTHFD1-211ENST00000555709 RRP7AQ9Y3A4 280 aaKnown RBP15.41■□□□□ 0.06
MTHFD1-211ENST00000555709 RTCBQ9Y3I0 505 aaKnown RBP15.41■□□□□ 0.06
MTHFD1-211ENST00000555709 ZNF521Q96K83 1311 aa15.41■□□□□ 0.06
MTHFD1-211ENST00000555709 VIRMAQ69YN4 1812 aaKnown RBP15.4■□□□□ 0.06
MTHFD1-211ENST00000555709 TIAM2Q8IVF5 1701 aa15.4■□□□□ 0.06
MTHFD1-211ENST00000555709 ADRA2BP18089 450 aa15.4■□□□□ 0.06
MTHFD1-211ENST00000555709 LMNB1P20700 586 aa15.4■□□□□ 0.06
MTHFD1-211ENST00000555709 GAS2L2Q8NHY3 880 aa15.4■□□□□ 0.06
MTHFD1-211ENST00000555709 AIDAQ96BJ3 306 aa15.4■□□□□ 0.06
MTHFD1-211ENST00000555709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.4■□□□□ 0.065e-7■■□□□ 11.8
MTHFD1-211ENST00000555709 CCDC27Q2M243 656 aa15.39■□□□□ 0.05
MTHFD1-211ENST00000555709 AMOTQ4VCS5 1084 aa15.39■□□□□ 0.05
MTHFD1-211ENST00000555709 HSPA8P11142 646 aaKnown RBP15.38■□□□□ 0.05
MTHFD1-211ENST00000555709 VEGFBP49765 207 aa15.38■□□□□ 0.05
MTHFD1-211ENST00000555709 DDR1Q08345 913 aa15.38■□□□□ 0.05
MTHFD1-211ENST00000555709 PLEKHO1Q53GL0 409 aaPredicted RBP15.38■□□□□ 0.05
MTHFD1-211ENST00000555709 SLC4A9Q96Q91 983 aa15.38■□□□□ 0.05
MTHFD1-211ENST00000555709 ATG3Q9NT62 314 aa15.38■□□□□ 0.05
MTHFD1-211ENST00000555709 TRIM35Q9UPQ4 493 aa15.38■□□□□ 0.05
MTHFD1-211ENST00000555709 ZNF831Q5JPB2 1677 aa15.38■□□□□ 0.05
MTHFD1-211ENST00000555709 SCN11AQ9UI33 1791 aa15.37■□□□□ 0.05
MTHFD1-211ENST00000555709 RIPK4P57078 832 aa15.37■□□□□ 0.05
MTHFD1-211ENST00000555709 RC3H1Q5TC82 1133 aaKnown RBP15.37■□□□□ 0.05
MTHFD1-211ENST00000555709 CHADLQ6NUI6 762 aa15.37■□□□□ 0.05
MTHFD1-211ENST00000555709 CCDC88AQ3V6T2 1871 aa15.37■□□□□ 0.05
MTHFD1-211ENST00000555709 COL5A3P25940 1745 aaPredicted RBP15.37■□□□□ 0.05
MTHFD1-211ENST00000555709 TNRC18O15417 2968 aaPredicted RBP15.36■□□□□ 0.05
MTHFD1-211ENST00000555709 RFC4P35249 363 aa15.36■□□□□ 0.05
MTHFD1-211ENST00000555709 NEUROD2Q15784 382 aa15.36■□□□□ 0.05
MTHFD1-211ENST00000555709 ZNF530Q6P9A1 599 aaPredicted RBP15.36■□□□□ 0.05
MTHFD1-211ENST00000555709 TMOD3Q9NYL9 352 aa15.36■□□□□ 0.05
MTHFD1-211ENST00000555709 SPG7Q9UQ90 795 aa15.36■□□□□ 0.05
MTHFD1-211ENST00000555709 PASKQ96RG2 1323 aa15.36■□□□□ 0.05
MTHFD1-211ENST00000555709 MYH14Q7Z406 1995 aaKnown RBP15.35■□□□□ 0.05
MTHFD1-211ENST00000555709 RPS6KA4O75676 772 aa15.35■□□□□ 0.05
MTHFD1-211ENST00000555709 POTEIP0CG38 1075 aa15.35■□□□□ 0.05
MTHFD1-211ENST00000555709 POTEJP0CG39 1038 aa15.35■□□□□ 0.05
MTHFD1-211ENST00000555709 WWC1Q8IX03 1113 aa15.35■□□□□ 0.05
MTHFD1-211ENST00000555709 SALL2Q9Y467 1007 aaPredicted RBP15.35■□□□□ 0.05
MTHFD1-211ENST00000555709 CNTNAP4Q9C0A0 1308 aa15.35■□□□□ 0.05
MTHFD1-211ENST00000555709 PDE4DIPQ5VU43 2346 aa15.34■□□□□ 0.05
MTHFD1-211ENST00000555709 MRC1P22897 1456 aa15.34■□□□□ 0.05
MTHFD1-211ENST00000555709 SIPA1L3O60292 1781 aaPredicted RBP15.34■□□□□ 0.05
MTHFD1-211ENST00000555709 CCDC85CA6NKD9 419 aa15.34■□□□□ 0.05
MTHFD1-211ENST00000555709 LMOD3Q0VAK6 560 aa15.34■□□□□ 0.05
MTHFD1-211ENST00000555709 AKAP4Q5JQC9 854 aa15.34■□□□□ 0.05
MTHFD1-211ENST00000555709 CEMIPQ8WUJ3 1361 aa15.34■□□□□ 0.05
MTHFD1-211ENST00000555709 GNAT3A8MTJ3 354 aa15.33■□□□□ 0.04
MTHFD1-211ENST00000555709 NFKBIEO00221 500 aa15.33■□□□□ 0.04
MTHFD1-211ENST00000555709 HTATSF1O43719 755 aaKnown RBP15.33■□□□□ 0.04
MTHFD1-211ENST00000555709 PHKG2P15735 406 aa15.33■□□□□ 0.04
MTHFD1-211ENST00000555709 FKBP8Q14318 412 aa15.33■□□□□ 0.04
MTHFD1-211ENST00000555709 C1orf141Q5JVX7 400 aa15.32■□□□□ 0.04
MTHFD1-211ENST00000555709 DLEC1Q9Y238 1755 aa15.31■□□□□ 0.04
MTHFD1-211ENST00000555709 IFNL2Q8IZJ0 200 aa15.31■□□□□ 0.04
MTHFD1-211ENST00000555709 THUMPD2Q9BTF0 503 aaKnown RBP15.31■□□□□ 0.04
MTHFD1-211ENST00000555709 SRP68Q9UHB9 627 aaKnown RBP15.31■□□□□ 0.04
MTHFD1-211ENST00000555709 POLRMTO00411 1230 aaKnown RBP15.3■□□□□ 0.04
MTHFD1-211ENST00000555709 IL16Q14005 1332 aa15.3■□□□□ 0.04
MTHFD1-211ENST00000555709 DCTN1Q14203 1278 aa15.3■□□□□ 0.04
MTHFD1-211ENST00000555709 DPY19L2Q6NUT2 758 aa15.3■□□□□ 0.04
MTHFD1-211ENST00000555709 MCM10Q7L590 875 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms