RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 LINC00116Q8NCU8 138 aa12.94□□□□□ -0.34
PRKCH-218ENST00000555628 TESK2Q96S53 571 aa12.94□□□□□ -0.34
PRKCH-218ENST00000555628 WWC3Q9ULE0 1092 aa12.94□□□□□ -0.34
PRKCH-218ENST00000555628 ARFGEF1Q9Y6D6 1849 aa12.94□□□□□ -0.34
PRKCH-218ENST00000555628 INSRP06213 1382 aa12.94□□□□□ -0.34
PRKCH-218ENST00000555628 ZNF831Q5JPB2 1677 aa12.93□□□□□ -0.34
PRKCH-218ENST00000555628 BOLA1Q9Y3E2 137 aa12.93□□□□□ -0.34
PRKCH-218ENST00000555628 COL5A3P25940 1745 aaPredicted RBP12.92□□□□□ -0.34
PRKCH-218ENST00000555628 AMPHP49418 695 aa12.92□□□□□ -0.34
PRKCH-218ENST00000555628 RRS1Q15050 365 aaKnown RBP12.92□□□□□ -0.34
PRKCH-218ENST00000555628 NKX1-1Q15270 411 aaPredicted RBP12.92□□□□□ -0.34
PRKCH-218ENST00000555628 COL13A1Q5TAT6 717 aaPredicted RBP12.92□□□□□ -0.34
PRKCH-218ENST00000555628 PIGBQ92521 554 aa12.92□□□□□ -0.34
PRKCH-218ENST00000555628 COG3Q96JB2 828 aa12.92□□□□□ -0.34
PRKCH-218ENST00000555628 AK7Q96M32 723 aa12.92□□□□□ -0.34
PRKCH-218ENST00000555628 NMRK2Q9NPI5 230 aa12.92□□□□□ -0.34
PRKCH-218ENST00000555628 KDRP35968 1356 aa12.92□□□□□ -0.34
PRKCH-218ENST00000555628 C4AP0C0L4 1744 aa12.91□□□□□ -0.34
PRKCH-218ENST00000555628 KIF20BQ96Q89 1820 aa12.91□□□□□ -0.34
PRKCH-218ENST00000555628 ITPK1Q13572 414 aa12.91□□□□□ -0.34
PRKCH-218ENST00000555628 MPRIPQ6WCQ1 1025 aa12.91□□□□□ -0.34
PRKCH-218ENST00000555628 SLAIN1Q8ND83 568 aa12.91□□□□□ -0.34
PRKCH-218ENST00000555628 KIF24Q5T7B8 1368 aa12.91□□□□□ -0.34
PRKCH-218ENST00000555628 SMG6Q86US8 1419 aaKnown RBP12.9□□□□□ -0.34
PRKCH-218ENST00000555628 PHF14O94880 888 aa12.9□□□□□ -0.34
PRKCH-218ENST00000555628 HMGB2P26583 209 aaKnown RBP12.9□□□□□ -0.34
PRKCH-218ENST00000555628 RAPGEF4Q8WZA2 1011 aa12.9□□□□□ -0.34
PRKCH-218ENST00000555628 SMARCC1Q92922 1105 aaPredicted RBP12.9□□□□□ -0.34
PRKCH-218ENST00000555628 CARD11Q9BXL7 1154 aa12.9□□□□□ -0.34
PRKCH-218ENST00000555628 LOC102724428A0A0B4J2F2 783 aa12.89□□□□□ -0.35
PRKCH-218ENST00000555628 FYB1O15117 783 aa12.89□□□□□ -0.35
PRKCH-218ENST00000555628 TATP17735 454 aaPredicted RBP12.89□□□□□ -0.35
PRKCH-218ENST00000555628 SIK1P57059 783 aa12.89□□□□□ -0.35
PRKCH-218ENST00000555628 HSP90AB2PQ58FF8 381 aa12.89□□□□□ -0.35
PRKCH-218ENST00000555628 RBM46Q8TBY0 533 aaKnown RBP12.89□□□□□ -0.35
PRKCH-218ENST00000555628 KLRG1Q96E93 195 aa12.89□□□□□ -0.35
PRKCH-218ENST00000555628 TMEM121BQ9BXQ6 578 aaPredicted RBP12.89□□□□□ -0.35
PRKCH-218ENST00000555628 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.89□□□□□ -0.35
PRKCH-218ENST00000555628 FLT4P35916 1363 aa12.89□□□□□ -0.35
PRKCH-218ENST00000555628 MMP10P09238 476 aa12.88□□□□□ -0.35
PRKCH-218ENST00000555628 HTRA3P83110 453 aa12.88□□□□□ -0.35
PRKCH-218ENST00000555628 TNRC6CQ9HCJ0 1690 aaKnown RBP12.88□□□□□ -0.35
PRKCH-218ENST00000555628 PPP1R37O75864 691 aa12.87□□□□□ -0.35
PRKCH-218ENST00000555628 KCNA3P22001 575 aa12.87□□□□□ -0.35
PRKCH-218ENST00000555628 TGFB2P61812 414 aa12.87□□□□□ -0.35
PRKCH-218ENST00000555628 MYH14Q7Z406 1995 aaKnown RBP12.87□□□□□ -0.35
PRKCH-218ENST00000555628 SBF1O95248 1867 aa12.87□□□□□ -0.35
PRKCH-218ENST00000555628 ADAMTS7Q9UKP4 1686 aa12.86□□□□□ -0.35
PRKCH-218ENST00000555628 TONSLQ96HA7 1378 aa12.86□□□□□ -0.35
PRKCH-218ENST00000555628 PLEKHG2Q9H7P9 1386 aa12.86□□□□□ -0.35
PRKCH-218ENST00000555628 ASAP1Q9ULH1 1129 aa12.86□□□□□ -0.35
PRKCH-218ENST00000555628 KCPQ6ZWJ8 1503 aa12.86□□□□□ -0.35
PRKCH-218ENST00000555628 A0A0G2JLW4 131 aa12.85□□□□□ -0.35
PRKCH-218ENST00000555628 GNPATO15228 680 aa12.85□□□□□ -0.35
PRKCH-218ENST00000555628 MICALL2Q8IY33 904 aa12.85□□□□□ -0.35
PRKCH-218ENST00000555628 SLC4A9Q96Q91 983 aa12.85□□□□□ -0.35
PRKCH-218ENST00000555628 GGNBP2Q9H3C7 697 aa12.85□□□□□ -0.35
PRKCH-218ENST00000555628 FSTL1Q12841 308 aa12.84□□□□□ -0.35
PRKCH-218ENST00000555628 NEUROD1Q13562 356 aa12.84□□□□□ -0.35
PRKCH-218ENST00000555628 C3orf67Q6ZVT6 689 aa12.84□□□□□ -0.35
PRKCH-218ENST00000555628 KDM6AO15550 1401 aaPredicted RBP12.84□□□□□ -0.35
PRKCH-218ENST00000555628 G3V3G9 751 aa12.83□□□□□ -0.36
PRKCH-218ENST00000555628 DPEP1P16444 411 aa12.83□□□□□ -0.36
PRKCH-218ENST00000555628 PRELPP51888 382 aa12.83□□□□□ -0.36
PRKCH-218ENST00000555628 ATG3Q9NT62 314 aa12.83□□□□□ -0.36
PRKCH-218ENST00000555628 BCS1LQ9Y276 419 aa12.83□□□□□ -0.36
PRKCH-218ENST00000555628 ST20-MTHFSA0A0A6YYL1 179 aa12.82□□□□□ -0.36
PRKCH-218ENST00000555628 GYS1P13807 737 aa12.82□□□□□ -0.36
PRKCH-218ENST00000555628 C9orf131Q5VYM1 1079 aa12.82□□□□□ -0.36
PRKCH-218ENST00000555628 DCAF5Q96JK2 942 aa12.82□□□□□ -0.36
PRKCH-218ENST00000555628 TMEM92Q6UXU6 159 aa12.81□□□□□ -0.36
PRKCH-218ENST00000555628 ARHGAP27Q6ZUM4 889 aa12.81□□□□□ -0.36
PRKCH-218ENST00000555628 EMILIN1Q9Y6C2 1016 aa12.81□□□□□ -0.36
PRKCH-218ENST00000555628 CNTNAP4Q9C0A0 1308 aa12.81□□□□□ -0.36
PRKCH-218ENST00000555628 TJP1Q07157 1748 aa12.8□□□□□ -0.36
PRKCH-218ENST00000555628 PHKG2P15735 406 aa12.8□□□□□ -0.36
PRKCH-218ENST00000555628 ATP6V1AP38606 617 aa12.8□□□□□ -0.36
PRKCH-218ENST00000555628 TMF1P82094 1093 aa12.8□□□□□ -0.36
PRKCH-218ENST00000555628 NLGN1Q8N2Q7 840 aa12.8□□□□□ -0.36
PRKCH-218ENST00000555628 TMOD3Q9NYL9 352 aa12.8□□□□□ -0.36
PRKCH-218ENST00000555628 DLEC1Q9Y238 1755 aa12.79□□□□□ -0.36
PRKCH-218ENST00000555628 FCHSD2O94868 740 aa12.79□□□□□ -0.36
PRKCH-218ENST00000555628 RC3H1Q5TC82 1133 aaKnown RBP12.79□□□□□ -0.36
PRKCH-218ENST00000555628 ARHGEF1Q92888 912 aaKnown RBP12.79□□□□□ -0.36
PRKCH-218ENST00000555628 FAM163AQ96GL9 167 aaPredicted RBP12.79□□□□□ -0.36
PRKCH-218ENST00000555628 NRXN2Q9P2S2 1712 aa12.79□□□□□ -0.36
PRKCH-218ENST00000555628 TNS4Q8IZW8 715 aa12.78□□□□□ -0.36
PRKCH-218ENST00000555628 EYA1Q99502 592 aa12.78□□□□□ -0.36
PRKCH-218ENST00000555628 CARD14Q9BXL6 1004 aa12.78□□□□□ -0.36
PRKCH-218ENST00000555628 CCDC87Q9NVE4 849 aa12.78□□□□□ -0.36
PRKCH-218ENST00000555628 SPG7Q9UQ90 795 aa12.78□□□□□ -0.36
PRKCH-218ENST00000555628 WASHC2AQ641Q2 1341 aa12.78□□□□□ -0.36
PRKCH-218ENST00000555628 TIAM2Q8IVF5 1701 aa12.77□□□□□ -0.36
PRKCH-218ENST00000555628 DDR1Q08345 913 aa12.77□□□□□ -0.37
PRKCH-218ENST00000555628 RTCBQ9Y3I0 505 aaKnown RBP12.77□□□□□ -0.37
PRKCH-218ENST00000555628 RPS6KA4O75676 772 aa12.76□□□□□ -0.37
PRKCH-218ENST00000555628 TRAPPC3LQ5T215 181 aa12.76□□□□□ -0.37
PRKCH-218ENST00000555628 LCE2DQ5TA82 110 aaPredicted RBP12.76□□□□□ -0.37
PRKCH-218ENST00000555628 KDM2BQ8NHM5 1336 aa12.76□□□□□ -0.37
PRKCH-218ENST00000555628 AFDNP55196 1824 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms