RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 TNNQ9UQP3 1299 aa12.33□□□□□ -0.44
HNRNPC-220ENST00000555585 THSD7AQ9UPZ6 1657 aa12.32□□□□□ -0.44
HNRNPC-220ENST00000555585 GIGYF1O75420 1035 aaPredicted RBP12.32□□□□□ -0.44
HNRNPC-220ENST00000555585 ATF7IPQ6VMQ6 1270 aa12.32□□□□□ -0.44
HNRNPC-220ENST00000555585 DZIP1LQ8IYY4 767 aaKnown RBP12.32□□□□□ -0.44
HNRNPC-220ENST00000555585 SYTL4Q96C24 671 aaPredicted RBP12.32□□□□□ -0.44
HNRNPC-220ENST00000555585 FMNL2Q96PY5 1086 aa12.32□□□□□ -0.44
HNRNPC-220ENST00000555585 PPP4R2Q9NY27 417 aa12.32□□□□□ -0.44
HNRNPC-220ENST00000555585 KAT6BQ8WYB5 2073 aa12.32□□□□□ -0.44
HNRNPC-220ENST00000555585 PAPPAQ13219 1627 aa12.32□□□□□ -0.44
HNRNPC-220ENST00000555585 TRIM27P14373 513 aa12.31□□□□□ -0.44
HNRNPC-220ENST00000555585 PIP4P2Q8N4L2 257 aa12.31□□□□□ -0.44
HNRNPC-220ENST00000555585 ACSBG1Q96GR2 724 aa12.31□□□□□ -0.44
HNRNPC-220ENST00000555585 ZNF496Q96IT1 587 aaPredicted RBP12.31□□□□□ -0.44
HNRNPC-220ENST00000555585 COG6Q9Y2V7 657 aa12.31□□□□□ -0.44
HNRNPC-220ENST00000555585 C5P01031 1676 aa12.31□□□□□ -0.44
HNRNPC-220ENST00000555585 HEG1Q9ULI3 1381 aa12.3□□□□□ -0.44
HNRNPC-220ENST00000555585 CACNA1FO60840 1977 aa12.3□□□□□ -0.44
HNRNPC-220ENST00000555585 PRAMEF22A3QJZ6 481 aa12.3□□□□□ -0.44
HNRNPC-220ENST00000555585 PRIM1P49642 420 aaKnown RBP12.3□□□□□ -0.44
HNRNPC-220ENST00000555585 PIGBQ92521 554 aa12.3□□□□□ -0.44
HNRNPC-220ENST00000555585 ARHGAP45Q92619 1136 aa12.3□□□□□ -0.44
HNRNPC-220ENST00000555585 API5Q9BZZ5 524 aaKnown RBP12.3□□□□□ -0.44
HNRNPC-220ENST00000555585 UBR2Q8IWV8 1755 aa12.3□□□□□ -0.44
HNRNPC-220ENST00000555585 PTCD1O75127 700 aaKnown RBP12.29□□□□□ -0.44
HNRNPC-220ENST00000555585 SNRPA1P09661 255 aaKnown RBP12.29□□□□□ -0.44
HNRNPC-220ENST00000555585 RLBP1P12271 317 aa12.29□□□□□ -0.44
HNRNPC-220ENST00000555585 ZNF772Q68DY9 489 aaPredicted RBP12.29□□□□□ -0.44
HNRNPC-220ENST00000555585 G2E3Q7L622 706 aa12.29□□□□□ -0.44
HNRNPC-220ENST00000555585 BCL9O00512 1426 aa12.28□□□□□ -0.44
HNRNPC-220ENST00000555585 SEPT12Q8IYM1 358 aa12.28□□□□□ -0.44
HNRNPC-220ENST00000555585 CHPF2Q9P2E5 772 aa12.28□□□□□ -0.44
HNRNPC-220ENST00000555585 ASAP1Q9ULH1 1129 aa12.28□□□□□ -0.44
HNRNPC-220ENST00000555585 PTPRCP08575 1304 aa12.28□□□□□ -0.44
HNRNPC-220ENST00000555585 LAMB4A4D0S4 1761 aa12.28□□□□□ -0.44
HNRNPC-220ENST00000555585 KCPQ6ZWJ8 1503 aa12.27□□□□□ -0.44
HNRNPC-220ENST00000555585 ONECUT3O60422 494 aaPredicted RBP12.27□□□□□ -0.45
HNRNPC-220ENST00000555585 MVPQ14764 893 aaKnown RBP12.27□□□□□ -0.45
HNRNPC-220ENST00000555585 ITPRIPQ8IWB1 547 aa12.27□□□□□ -0.45
HNRNPC-220ENST00000555585 TMEM57Q8N5G2 664 aa12.27□□□□□ -0.45
HNRNPC-220ENST00000555585 CCDC136Q96JN2 1154 aa12.27□□□□□ -0.45
HNRNPC-220ENST00000555585 ATG3Q9NT62 314 aa12.27□□□□□ -0.45
HNRNPC-220ENST00000555585 DBF4Q9UBU7 674 aaPredicted RBP12.27□□□□□ -0.45
HNRNPC-220ENST00000555585 ANXA1P04083 346 aa12.26□□□□□ -0.45
HNRNPC-220ENST00000555585 FLIIQ13045 1269 aa12.26□□□□□ -0.45
HNRNPC-220ENST00000555585 FKBP5Q13451 457 aaPredicted RBP12.26□□□□□ -0.45
HNRNPC-220ENST00000555585 B4GALNT3Q6L9W6 998 aa12.26□□□□□ -0.45
HNRNPC-220ENST00000555585 PHAXQ9H814 394 aaKnown RBP12.26□□□□□ -0.45
HNRNPC-220ENST00000555585 USP16Q9Y5T5 823 aa12.26□□□□□ -0.45
HNRNPC-220ENST00000555585 RBM6P78332 1123 aaKnown RBP12.25□□□□□ -0.45
HNRNPC-220ENST00000555585 FAM182BQ5T319 152 aa12.25□□□□□ -0.45
HNRNPC-220ENST00000555585 HYPKQ9NX55 129 aa12.25□□□□□ -0.45
HNRNPC-220ENST00000555585 DDX19BQ9UMR2 479 aa12.25□□□□□ -0.45
HNRNPC-220ENST00000555585 ABCC4O15439 1325 aa12.25□□□□□ -0.45
HNRNPC-220ENST00000555585 KCNQ2O43526 872 aa12.24□□□□□ -0.45
HNRNPC-220ENST00000555585 MYL6BP14649 208 aa12.24□□□□□ -0.45
HNRNPC-220ENST00000555585 SLC4A10Q6U841 1118 aa12.24□□□□□ -0.45
HNRNPC-220ENST00000555585 DDX21Q9NR30 783 aaKnown RBP eCLIP12.24□□□□□ -0.45
HNRNPC-220ENST00000555585 BRWD3Q6RI45 1802 aa12.23□□□□□ -0.45
HNRNPC-220ENST00000555585 F6X3S4 739 aa12.23□□□□□ -0.45
HNRNPC-220ENST00000555585 FXR2P51116 673 aaKnown RBP eCLIP12.23□□□□□ -0.455e-14■■■■□ 23.4
HNRNPC-220ENST00000555585 PROSER3Q2NL68 480 aa12.23□□□□□ -0.45
HNRNPC-220ENST00000555585 VSIG10Q8N0Z9 540 aa12.23□□□□□ -0.45
HNRNPC-220ENST00000555585 TEX13AQ9BXU3 409 aaPredicted RBP12.23□□□□□ -0.45
HNRNPC-220ENST00000555585 SSUH2Q9Y2M2 353 aa12.23□□□□□ -0.45
HNRNPC-220ENST00000555585 NHSQ6T4R5 1651 aa12.22□□□□□ -0.45
HNRNPC-220ENST00000555585 RGS12O14924 1447 aa12.22□□□□□ -0.45
HNRNPC-220ENST00000555585 PIP4K2AP48426 406 aaPredicted RBP12.22□□□□□ -0.45
HNRNPC-220ENST00000555585 AIMP1Q12904 312 aaKnown RBP12.22□□□□□ -0.45
HNRNPC-220ENST00000555585 AAMPQ13685 434 aa12.22□□□□□ -0.45
HNRNPC-220ENST00000555585 PDIA6Q15084 440 aa12.22□□□□□ -0.45
HNRNPC-220ENST00000555585 DNAJC10Q8IXB1 793 aa12.22□□□□□ -0.45
HNRNPC-220ENST00000555585 SMARCC1Q92922 1105 aaPredicted RBP12.22□□□□□ -0.45
HNRNPC-220ENST00000555585 CHMP4BQ9H444 224 aaKnown RBP12.22□□□□□ -0.45
HNRNPC-220ENST00000555585 ERBB4Q15303 1308 aa12.21□□□□□ -0.45
HNRNPC-220ENST00000555585 DDX58O95786 925 aaKnown RBP12.21□□□□□ -0.45
HNRNPC-220ENST00000555585 RXRBP28702 533 aa12.21□□□□□ -0.45
HNRNPC-220ENST00000555585 CCT4P50991 539 aaKnown RBP12.21□□□□□ -0.45
HNRNPC-220ENST00000555585 INTS3Q68E01 1043 aaKnown RBP12.21□□□□□ -0.45
HNRNPC-220ENST00000555585 KRT27Q7Z3Y8 459 aa12.21□□□□□ -0.45
HNRNPC-220ENST00000555585 SPDYE1Q8NFV5 336 aaPredicted RBP12.21□□□□□ -0.45
HNRNPC-220ENST00000555585 BTAF1O14981 1849 aa12.21□□□□□ -0.46
HNRNPC-220ENST00000555585 SBF2Q86WG5 1849 aa12.21□□□□□ -0.46
HNRNPC-220ENST00000555585 TJP1Q07157 1748 aa12.2□□□□□ -0.46
HNRNPC-220ENST00000555585 STARD3NLO95772 234 aa12.2□□□□□ -0.46
HNRNPC-220ENST00000555585 A1BGP04217 495 aa12.2□□□□□ -0.46
HNRNPC-220ENST00000555585 XAGE3Q8WTP9 111 aa12.2□□□□□ -0.46
HNRNPC-220ENST00000555585 PALLDQ8WX93 1383 aa12.19□□□□□ -0.46
HNRNPC-220ENST00000555585 PI4KAP2A4QPH2 592 aa12.19□□□□□ -0.46
HNRNPC-220ENST00000555585 ATP6V1AP38606 617 aa12.19□□□□□ -0.46
HNRNPC-220ENST00000555585 KSR2Q6VAB6 950 aa12.19□□□□□ -0.46
HNRNPC-220ENST00000555585 COPS6Q7L5N1 327 aa12.19□□□□□ -0.46
HNRNPC-220ENST00000555585 RIC3Q7Z5B4 369 aa12.19□□□□□ -0.46
HNRNPC-220ENST00000555585 PI4KAP1Q8N8J0 262 aa12.19□□□□□ -0.46
HNRNPC-220ENST00000555585 DNAAF4Q8WXU2 420 aa12.19□□□□□ -0.46
HNRNPC-220ENST00000555585 SLC4A9Q96Q91 983 aa12.19□□□□□ -0.46
HNRNPC-220ENST00000555585 CLEC11AQ9Y240 323 aa12.19□□□□□ -0.46
HNRNPC-220ENST00000555585 PXDNLA1KZ92 1463 aa12.19□□□□□ -0.46
HNRNPC-220ENST00000555585 N4BP2Q86UW6 1770 aaPredicted RBP12.18□□□□□ -0.46
HNRNPC-220ENST00000555585 LOC102724428A0A0B4J2F2 783 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms