RNA–Protein interactions for RNA: ENST00000555436.1

CBLN3-202, Transcript of cerebellin 3 precursor, humanhuman

TSL 3 BASIC

Gene CBLN3, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-202ENST00000555436 COL15A1P39059 1388 aa25.88■■□□□ 1.73
CBLN3-202ENST00000555436 TGFB2P61812 414 aa25.88■■□□□ 1.73
CBLN3-202ENST00000555436 MCM10Q7L590 875 aa25.88■■□□□ 1.73
CBLN3-202ENST00000555436 FMNL2Q96PY5 1086 aa25.88■■□□□ 1.73
CBLN3-202ENST00000555436 USPL1Q5W0Q7 1092 aa25.87■■□□□ 1.73
CBLN3-202ENST00000555436 NARFQ9UHQ1 456 aa25.87■■□□□ 1.73
CBLN3-202ENST00000555436 PXDNLA1KZ92 1463 aa25.86■■□□□ 1.73
CBLN3-202ENST00000555436 CANXP27824 592 aaKnown RBP25.86■■□□□ 1.73
CBLN3-202ENST00000555436 DDR1Q08345 913 aa25.86■■□□□ 1.73
CBLN3-202ENST00000555436 KCNQ3O43525 872 aa25.85■■□□□ 1.73
CBLN3-202ENST00000555436 NEFMP07197 916 aa25.85■■□□□ 1.73
CBLN3-202ENST00000555436 TM4SF1P30408 202 aa25.85■■□□□ 1.73
CBLN3-202ENST00000555436 WWC3Q9ULE0 1092 aa25.85■■□□□ 1.73
CBLN3-202ENST00000555436 EIF5P55010 431 aaKnown RBP25.84■■□□□ 1.73
CBLN3-202ENST00000555436 DCTN1Q14203 1278 aa25.84■■□□□ 1.73
CBLN3-202ENST00000555436 PLEKHF1Q96S99 279 aa25.84■■□□□ 1.73
CBLN3-202ENST00000555436 KIF13BQ9NQT8 1826 aa25.83■■□□□ 1.73
CBLN3-202ENST00000555436 A0A0G2JLW4 131 aa25.82■■□□□ 1.72
CBLN3-202ENST00000555436 POLRMTO00411 1230 aaKnown RBP25.82■■□□□ 1.72
CBLN3-202ENST00000555436 A0A087WZG4 1122 aa25.81■■□□□ 1.72
CBLN3-202ENST00000555436 PNNQ9H307 717 aaKnown RBP25.81■■□□□ 1.72
CBLN3-202ENST00000555436 BCL2L12Q9HB09 334 aa25.81■■□□□ 1.72
CBLN3-202ENST00000555436 DPEP1P16444 411 aa25.8■■□□□ 1.72
CBLN3-202ENST00000555436 NFIXQ14938 502 aa25.79■■□□□ 1.72
CBLN3-202ENST00000555436 KIAA1551Q9HCM1 1747 aa25.78■■□□□ 1.72
CBLN3-202ENST00000555436 A1BGP04217 495 aa25.78■■□□□ 1.72
CBLN3-202ENST00000555436 IL6STP40189 918 aaPredicted RBP25.78■■□□□ 1.72
CBLN3-202ENST00000555436 TAF7Q15545 349 aaPredicted RBP25.78■■□□□ 1.72
CBLN3-202ENST00000555436 NFE2L2Q16236 605 aa25.78■■□□□ 1.72
CBLN3-202ENST00000555436 MYBBP1AQ9BQG0 1328 aaKnown RBP25.77■■□□□ 1.72
CBLN3-202ENST00000555436 SNRPA1P09661 255 aaKnown RBP25.76■■□□□ 1.71
CBLN3-202ENST00000555436 BCS1LQ9Y276 419 aa25.76■■□□□ 1.71
CBLN3-202ENST00000555436 USP16Q9Y5T5 823 aa25.76■■□□□ 1.71
CBLN3-202ENST00000555436 MAPK8IP3Q9UPT6 1336 aa25.76■■□□□ 1.71
CBLN3-202ENST00000555436 KCNA3P22001 575 aa25.75■■□□□ 1.71
CBLN3-202ENST00000555436 ZNF330Q9Y3S2 320 aaPredicted RBP25.75■■□□□ 1.71
CBLN3-202ENST00000555436 PRAMEF22A3QJZ6 481 aa25.73■■□□□ 1.71
CBLN3-202ENST00000555436 NPM2Q86SE8 214 aaKnown RBP25.73■■□□□ 1.71
CBLN3-202ENST00000555436 TBC1D2BQ9UPU7 963 aa25.73■■□□□ 1.71
CBLN3-202ENST00000555436 N4BP2Q86UW6 1770 aaPredicted RBP25.73■■□□□ 1.71
CBLN3-202ENST00000555436 SERPINB2P05120 415 aa25.72■■□□□ 1.71
CBLN3-202ENST00000555436 PNISRQ8TF01 805 aaKnown RBP25.72■■□□□ 1.71
CBLN3-202ENST00000555436 MIS18AQ9NYP9 233 aa25.72■■□□□ 1.71
CBLN3-202ENST00000555436 PIM2Q9P1W9 311 aa25.72■■□□□ 1.71
CBLN3-202ENST00000555436 ADCY9O60503 1353 aa25.69■■□□□ 1.7
CBLN3-202ENST00000555436 CAMTA2O94983 1202 aa25.69■■□□□ 1.7
CBLN3-202ENST00000555436 CHRNA5P30532 468 aa25.69■■□□□ 1.7
CBLN3-202ENST00000555436 TBC1D9BQ66K14 1250 aa25.69■■□□□ 1.7
CBLN3-202ENST00000555436 BICDL1Q6ZP65 573 aa25.69■■□□□ 1.7
CBLN3-202ENST00000555436 THUMPD2Q9BTF0 503 aaKnown RBP25.69■■□□□ 1.7
CBLN3-202ENST00000555436 ATP10DQ9P241 1426 aa25.69■■□□□ 1.7
CBLN3-202ENST00000555436 PIP4K2AP48426 406 aaPredicted RBP25.68■■□□□ 1.7
CBLN3-202ENST00000555436 DALRD3Q5D0E6 543 aaKnown RBP25.68■■□□□ 1.7
CBLN3-202ENST00000555436 DZIP3Q86Y13 1208 aaKnown RBP25.67■■□□□ 1.7
CBLN3-202ENST00000555436 NRXN2Q9P2S2 1712 aa25.66■■□□□ 1.7
CBLN3-202ENST00000555436 SCN7AQ01118 1682 aa25.66■■□□□ 1.7
CBLN3-202ENST00000555436 DLG5Q8TDM6 1919 aa25.65■■□□□ 1.7
CBLN3-202ENST00000555436 NBPF26B4DH59 902 aa25.65■■□□□ 1.7
CBLN3-202ENST00000555436 RIPK4P57078 832 aa25.65■■□□□ 1.7
CBLN3-202ENST00000555436 NBPF10Q6P3W6 841 aaKnown RBP25.65■■□□□ 1.7
CBLN3-202ENST00000555436 ARHGAP27Q6ZUM4 889 aa25.65■■□□□ 1.7
CBLN3-202ENST00000555436 NBPF15Q8N660 670 aa25.65■■□□□ 1.7
CBLN3-202ENST00000555436 PRKRIP1Q9H875 184 aaPredicted RBP25.65■■□□□ 1.7
CBLN3-202ENST00000555436 BRCA1P38398 1863 aaKnown RBP25.64■■□□□ 1.7
CBLN3-202ENST00000555436 ZEB1P37275 1124 aaPredicted RBP25.64■■□□□ 1.7
CBLN3-202ENST00000555436 EIF4A1P60842 406 aaKnown RBP25.64■■□□□ 1.7
CBLN3-202ENST00000555436 CARMIL3Q8ND23 1372 aa25.64■■□□□ 1.69
CBLN3-202ENST00000555436 GIGYF1O75420 1035 aaPredicted RBP25.63■■□□□ 1.69
CBLN3-202ENST00000555436 TMPOP42166 694 aaKnown RBP25.63■■□□□ 1.69
CBLN3-202ENST00000555436 SETDB2Q96T68 719 aa25.63■■□□□ 1.69
CBLN3-202ENST00000555436 WDR43Q15061 677 aaKnown RBP eCLIP25.62■■□□□ 1.69
CBLN3-202ENST00000555436 CLEC4GQ6UXB4 293 aa25.62■■□□□ 1.69
CBLN3-202ENST00000555436 AFDNP55196 1824 aaKnown RBP25.62■■□□□ 1.69
CBLN3-202ENST00000555436 LMOD3Q0VAK6 560 aa25.61■■□□□ 1.69
CBLN3-202ENST00000555436 KDM3BQ7LBC6 1761 aa25.6■■□□□ 1.69
CBLN3-202ENST00000555436 RGL2O15211 777 aa25.6■■□□□ 1.69
CBLN3-202ENST00000555436 C1QTNF8P60827 252 aa25.6■■□□□ 1.69
CBLN3-202ENST00000555436 PRR5LQ6MZQ0 368 aa25.6■■□□□ 1.69
CBLN3-202ENST00000555436 GPBP1L1Q9HC44 474 aaPredicted RBP25.6■■□□□ 1.69
CBLN3-202ENST00000555436 ZNF652Q9Y2D9 606 aa25.6■■□□□ 1.69
CBLN3-202ENST00000555436 C2CD5Q86YS7 1000 aa25.59■■□□□ 1.69
CBLN3-202ENST00000555436 CCDC146Q8IYE0 955 aa25.59■■□□□ 1.69
CBLN3-202ENST00000555436 BRIP1Q9BX63 1249 aa25.59■■□□□ 1.69
CBLN3-202ENST00000555436 H0YIN7 160 aa25.58■■□□□ 1.69
CBLN3-202ENST00000555436 RUNDC1Q96C34 613 aa25.58■■□□□ 1.69
CBLN3-202ENST00000555436 TSPYL4Q9UJ04 414 aa25.58■■□□□ 1.69
CBLN3-202ENST00000555436 CNBD1Q8NA66 436 aa25.57■■□□□ 1.68
CBLN3-202ENST00000555436 BABAM1Q9NWV8 329 aa25.57■■□□□ 1.68
CBLN3-202ENST00000555436 ADAMTS8Q9UP79 889 aa25.57■■□□□ 1.68
CBLN3-202ENST00000555436 PDZRN3Q9UPQ7 1066 aa25.57■■□□□ 1.68
CBLN3-202ENST00000555436 RRP7AQ9Y3A4 280 aaKnown RBP25.57■■□□□ 1.68
CBLN3-202ENST00000555436 BCORQ6W2J9 1755 aa25.56■■□□□ 1.68
CBLN3-202ENST00000555436 ARFGEF1Q9Y6D6 1849 aa25.56■■□□□ 1.68
CBLN3-202ENST00000555436 PDE6BP35913 854 aa25.56■■□□□ 1.68
CBLN3-202ENST00000555436 TTLL6Q8N841 843 aa25.56■■□□□ 1.68
CBLN3-202ENST00000555436 ZNF526Q8TF50 670 aaPredicted RBP25.56■■□□□ 1.68
CBLN3-202ENST00000555436 CCDC24Q8N4L8 307 aa25.55■■□□□ 1.68
CBLN3-202ENST00000555436 LAMB4A4D0S4 1761 aa25.54■■□□□ 1.68
CBLN3-202ENST00000555436 NPHP1O15259 732 aa25.54■■□□□ 1.68
CBLN3-202ENST00000555436 NEUROD2Q15784 382 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms