RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-215ENST00000555382 TRAPPC3LQ5T215 181 aa12.76□□□□□ -0.37
PRKCH-215ENST00000555382 KDM2BQ8NHM5 1336 aa12.76□□□□□ -0.37
PRKCH-215ENST00000555382 AFDNP55196 1824 aaKnown RBP12.75□□□□□ -0.37
PRKCH-215ENST00000555382 WDR43Q15061 677 aaKnown RBP eCLIP12.75□□□□□ -0.37
PRKCH-215ENST00000555382 IFNL2Q8IZJ0 200 aa12.75□□□□□ -0.37
PRKCH-215ENST00000555382 RRAGCQ9HB90 399 aa12.75□□□□□ -0.37
PRKCH-215ENST00000555382 RNF181Q9P0P0 153 aa12.75□□□□□ -0.37
PRKCH-215ENST00000555382 ZC3H4Q9UPT8 1303 aaKnown RBP12.75□□□□□ -0.37
PRKCH-215ENST00000555382 USP42Q9H9J4 1324 aaKnown RBP12.74□□□□□ -0.37
PRKCH-215ENST00000555382 HSPA1AP0DMV8 641 aaKnown RBP12.74□□□□□ -0.37
PRKCH-215ENST00000555382 HSPA1BP0DMV9 641 aaKnown RBP12.74□□□□□ -0.37
PRKCH-215ENST00000555382 U2AF1L5P0DN76 240 aaPredicted RBP12.74□□□□□ -0.37
PRKCH-215ENST00000555382 U2AF1Q01081 240 aaKnown RBP eCLIP12.74□□□□□ -0.37
PRKCH-215ENST00000555382 SULT6B1Q6IMI4 303 aa12.74□□□□□ -0.37
PRKCH-215ENST00000555382 NGEFQ8N5V2 710 aa12.74□□□□□ -0.37
PRKCH-215ENST00000555382 SMC1BQ8NDV3 1235 aa12.74□□□□□ -0.37
PRKCH-215ENST00000555382 RSPH6AQ9H0K4 717 aa12.74□□□□□ -0.37
PRKCH-215ENST00000555382 PIM2Q9P1W9 311 aa12.74□□□□□ -0.37
PRKCH-215ENST00000555382 ERVV-2B6SEH9 535 aa12.73□□□□□ -0.37
PRKCH-215ENST00000555382 U2SURPO15042 1029 aaKnown RBP12.73□□□□□ -0.37
PRKCH-215ENST00000555382 FKBP8Q14318 412 aa12.73□□□□□ -0.37
PRKCH-215ENST00000555382 AMOTQ4VCS5 1084 aa12.73□□□□□ -0.37
PRKCH-215ENST00000555382 DALRD3Q5D0E6 543 aaKnown RBP12.73□□□□□ -0.37
PRKCH-215ENST00000555382 C16orf71Q8IYS4 520 aaPredicted RBP12.73□□□□□ -0.37
PRKCH-215ENST00000555382 PLEKHF1Q96S99 279 aa12.73□□□□□ -0.37
PRKCH-215ENST00000555382 SRP68Q9UHB9 627 aaKnown RBP12.73□□□□□ -0.37
PRKCH-215ENST00000555382 ADAMTS8Q9UP79 889 aa12.73□□□□□ -0.37
PRKCH-215ENST00000555382 PARP3Q9Y6F1 533 aa12.73□□□□□ -0.37
PRKCH-215ENST00000555382 POLRMTO00411 1230 aaKnown RBP12.72□□□□□ -0.37
PRKCH-215ENST00000555382 CHRNA5P30532 468 aa12.72□□□□□ -0.37
PRKCH-215ENST00000555382 POTECB2RU33 542 aa12.71□□□□□ -0.37
PRKCH-215ENST00000555382 TM4SF1P30408 202 aa12.71□□□□□ -0.37
PRKCH-215ENST00000555382 RFC4P35249 363 aa12.71□□□□□ -0.37
PRKCH-215ENST00000555382 RASSF7Q02833 373 aa12.71□□□□□ -0.37
PRKCH-215ENST00000555382 RUNDC1Q96C34 613 aa12.71□□□□□ -0.37
PRKCH-215ENST00000555382 CCDC88AQ3V6T2 1871 aa12.7□□□□□ -0.38
PRKCH-215ENST00000555382 AEBP1Q8IUX7 1158 aa12.7□□□□□ -0.38
PRKCH-215ENST00000555382 SCN11AQ9UI33 1791 aa12.69□□□□□ -0.38
PRKCH-215ENST00000555382 DLG5Q8TDM6 1919 aa12.69□□□□□ -0.38
PRKCH-215ENST00000555382 NEFMP07197 916 aa12.69□□□□□ -0.38
PRKCH-215ENST00000555382 PRKAR2BP31323 418 aa12.69□□□□□ -0.38
PRKCH-215ENST00000555382 CRKLP46109 303 aaKnown RBP12.69□□□□□ -0.38
PRKCH-215ENST00000555382 PLEKHO1Q53GL0 409 aaPredicted RBP12.69□□□□□ -0.38
PRKCH-215ENST00000555382 INTS5Q6P9B9 1019 aaKnown RBP12.69□□□□□ -0.38
PRKCH-215ENST00000555382 DICER1Q9UPY3 1922 aaKnown RBP12.68□□□□□ -0.38
PRKCH-215ENST00000555382 ANKRD31Q8N7Z5 1873 aa12.68□□□□□ -0.38
PRKCH-215ENST00000555382 MRC1P22897 1456 aa12.68□□□□□ -0.38
PRKCH-215ENST00000555382 GLTPD2A6NH11 291 aa12.68□□□□□ -0.38
PRKCH-215ENST00000555382 NFKBIEO00221 500 aa12.68□□□□□ -0.38
PRKCH-215ENST00000555382 SLC34A2O95436 690 aa12.68□□□□□ -0.38
PRKCH-215ENST00000555382 HMOX1P09601 288 aa12.68□□□□□ -0.38
PRKCH-215ENST00000555382 GAS2L2Q8NHY3 880 aa12.68□□□□□ -0.38
PRKCH-215ENST00000555382 RBM42Q9BTD8 480 aaKnown RBP12.68□□□□□ -0.38
PRKCH-215ENST00000555382 COL11A2P13942 1736 aaPredicted RBP12.68□□□□□ -0.38
PRKCH-215ENST00000555382 FER1L6Q2WGJ9 1857 aa12.68□□□□□ -0.38
PRKCH-215ENST00000555382 HTATSF1O43719 755 aaKnown RBP12.67□□□□□ -0.38
PRKCH-215ENST00000555382 VEGFAP15692 232 aaPredicted RBP12.67□□□□□ -0.38
PRKCH-215ENST00000555382 CARMIL3Q8ND23 1372 aa12.67□□□□□ -0.38
PRKCH-215ENST00000555382 VIRMAQ69YN4 1812 aaKnown RBP12.67□□□□□ -0.38
PRKCH-215ENST00000555382 SOS1Q07889 1333 aaPredicted RBP12.66□□□□□ -0.38
PRKCH-215ENST00000555382 LMNB1P20700 586 aa12.66□□□□□ -0.38
PRKCH-215ENST00000555382 CCDC27Q2M243 656 aa12.66□□□□□ -0.38
PRKCH-215ENST00000555382 PHACTR3Q96KR7 559 aa12.66□□□□□ -0.38
PRKCH-215ENST00000555382 MAPK8IP3Q9UPT6 1336 aa12.65□□□□□ -0.38
PRKCH-215ENST00000555382 HSP90AB1P08238 724 aaKnown RBP12.65□□□□□ -0.38
PRKCH-215ENST00000555382 NFE2L2Q16236 605 aa12.65□□□□□ -0.38
PRKCH-215ENST00000555382 BCL2L12Q9HB09 334 aa12.65□□□□□ -0.38
PRKCH-215ENST00000555382 UBR2Q8IWV8 1755 aa12.64□□□□□ -0.39
PRKCH-215ENST00000555382 PTCD1O75127 700 aaKnown RBP12.64□□□□□ -0.39
PRKCH-215ENST00000555382 NFIXQ14938 502 aa12.64□□□□□ -0.39
PRKCH-215ENST00000555382 MTHFSDQ2M296 383 aaKnown RBP12.64□□□□□ -0.39
PRKCH-215ENST00000555382 AKAP4Q5JQC9 854 aa12.64□□□□□ -0.39
PRKCH-215ENST00000555382 FAM9BQ8IZU0 186 aa12.64□□□□□ -0.39
PRKCH-215ENST00000555382 TMPOP42166 694 aaKnown RBP12.63□□□□□ -0.39
PRKCH-215ENST00000555382 LMOD3Q0VAK6 560 aa12.63□□□□□ -0.39
PRKCH-215ENST00000555382 SCN7AQ01118 1682 aa12.63□□□□□ -0.39
PRKCH-215ENST00000555382 ADAMTSL1Q8N6G6 1762 aa12.63□□□□□ -0.39
PRKCH-215ENST00000555382 CNTNAP1P78357 1384 aa12.62□□□□□ -0.39
PRKCH-215ENST00000555382 CEMIPQ8WUJ3 1361 aa12.62□□□□□ -0.39
PRKCH-215ENST00000555382 GNAT3A8MTJ3 354 aa12.62□□□□□ -0.39
PRKCH-215ENST00000555382 CABP4P57796 275 aa12.62□□□□□ -0.39
PRKCH-215ENST00000555382 USPL1Q5W0Q7 1092 aa12.62□□□□□ -0.39
PRKCH-215ENST00000555382 ZNF530Q6P9A1 599 aaPredicted RBP12.62□□□□□ -0.39
PRKCH-215ENST00000555382 CREBZFQ9NS37 354 aa12.62□□□□□ -0.39
PRKCH-215ENST00000555382 ARFGEF2Q9Y6D5 1785 aa12.61□□□□□ -0.39
PRKCH-215ENST00000555382 COL15A1P39059 1388 aa12.61□□□□□ -0.39
PRKCH-215ENST00000555382 APAF1O14727 1248 aa12.61□□□□□ -0.39
PRKCH-215ENST00000555382 FOXN1O15353 648 aa12.61□□□□□ -0.39
PRKCH-215ENST00000555382 C1orf141Q5JVX7 400 aa12.61□□□□□ -0.39
PRKCH-215ENST00000555382 NFATC2IPQ8NCF5 419 aa12.61□□□□□ -0.39
PRKCH-215ENST00000555382 SIPA1L3O60292 1781 aaPredicted RBP12.61□□□□□ -0.39
PRKCH-215ENST00000555382 PASKQ96RG2 1323 aa12.61□□□□□ -0.39
PRKCH-215ENST00000555382 POTEIP0CG38 1075 aa12.6□□□□□ -0.39
PRKCH-215ENST00000555382 POTEJP0CG39 1038 aa12.6□□□□□ -0.39
PRKCH-215ENST00000555382 CYP19A1P11511 503 aaPredicted RBP12.6□□□□□ -0.39
PRKCH-215ENST00000555382 DNAJC10Q8IXB1 793 aa12.6□□□□□ -0.39
PRKCH-215ENST00000555382 PRDM10Q9NQV6 1147 aa12.6□□□□□ -0.39
PRKCH-215ENST00000555382 BABAM1Q9NWV8 329 aa12.6□□□□□ -0.39
PRKCH-215ENST00000555382 NARFQ9UHQ1 456 aa12.6□□□□□ -0.39
PRKCH-215ENST00000555382 THSD7BQ9C0I4 1608 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms