RNA–Protein interactions for RNA: ENST00000555363.1

SEC23A-209, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2

Gene SEC23A, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-209ENST00000555363 IGHA1P01876 353 aa10.55□□□□□ -0.72
SEC23A-209ENST00000555363 NCOA4Q13772 614 aa10.55□□□□□ -0.72
SEC23A-209ENST00000555363 UBAP2LQ14157 1087 aaKnown RBP10.55□□□□□ -0.72
SEC23A-209ENST00000555363 NLRP8Q86W28 1048 aa10.55□□□□□ -0.72
SEC23A-209ENST00000555363 EDARADDQ8WWZ3 215 aa10.55□□□□□ -0.72
SEC23A-209ENST00000555363 ZCCHC2Q9C0B9 1178 aaKnown RBP10.55□□□□□ -0.72
SEC23A-209ENST00000555363 ATXN7O15265 892 aaPredicted RBP10.54□□□□□ -0.72
SEC23A-209ENST00000555363 BICDL1Q6ZP65 573 aa10.54□□□□□ -0.72
SEC23A-209ENST00000555363 DEPDC4Q8N2C3 294 aa10.54□□□□□ -0.72
SEC23A-209ENST00000555363 NFATC2IPQ8NCF5 419 aa10.54□□□□□ -0.72
SEC23A-209ENST00000555363 SLC4A9Q96Q91 983 aa10.54□□□□□ -0.72
SEC23A-209ENST00000555363 ARXQ96QS3 562 aa10.54□□□□□ -0.72
SEC23A-209ENST00000555363 PCDHGA11Q9Y5H2 935 aa10.54□□□□□ -0.72
SEC23A-209ENST00000555363 A0A1W2PNR3 127 aa10.53□□□□□ -0.72
SEC23A-209ENST00000555363 ATP4AP20648 1035 aa10.53□□□□□ -0.72
SEC23A-209ENST00000555363 CTBSQ01459 385 aa10.53□□□□□ -0.72
SEC23A-209ENST00000555363 MKL2Q9ULH7 1088 aa10.53□□□□□ -0.72
SEC23A-209ENST00000555363 USP17L5A8MUK1 530 aa10.52□□□□□ -0.73
SEC23A-209ENST00000555363 SHISA8B8ZZ34 492 aa10.52□□□□□ -0.73
SEC23A-209ENST00000555363 KHNYNO15037 678 aaKnown RBP10.52□□□□□ -0.73
SEC23A-209ENST00000555363 MTFR1Q15390 333 aa10.52□□□□□ -0.73
SEC23A-209ENST00000555363 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.52□□□□□ -0.73
SEC23A-209ENST00000555363 GGA1Q9UJY5 639 aa10.52□□□□□ -0.73
SEC23A-209ENST00000555363 DCDC2BA2VCK2 349 aa10.51□□□□□ -0.73
SEC23A-209ENST00000555363 TRIM50Q86XT4 487 aa10.51□□□□□ -0.73
SEC23A-209ENST00000555363 DCAF5Q96JK2 942 aa10.51□□□□□ -0.73
SEC23A-209ENST00000555363 NDFIP2Q9NV92 336 aa10.51□□□□□ -0.73
SEC23A-209ENST00000555363 ZDHHC3Q9NYG2 299 aa10.51□□□□□ -0.73
SEC23A-209ENST00000555363 PARP3Q9Y6F1 533 aa10.51□□□□□ -0.73
SEC23A-209ENST00000555363 C2CD2LO14523 706 aa10.5□□□□□ -0.73
SEC23A-209ENST00000555363 SUZ12Q15022 739 aaKnown RBP10.5□□□□□ -0.73
SEC23A-209ENST00000555363 NEUROD4Q9HD90 331 aa10.5□□□□□ -0.73
SEC23A-209ENST00000555363 ZNF358Q9NW07 568 aa10.5□□□□□ -0.73
SEC23A-209ENST00000555363 USP3Q9Y6I4 520 aa10.5□□□□□ -0.73
SEC23A-209ENST00000555363 SNRPNP63162 240 aaKnown RBP10.49□□□□□ -0.73
SEC23A-209ENST00000555363 SLCO4C1Q6ZQN7 724 aa10.49□□□□□ -0.73
SEC23A-209ENST00000555363 C1orf229Q6ZS94 237 aaPredicted RBP10.49□□□□□ -0.73
SEC23A-209ENST00000555363 DNAAF2Q9NVR5 837 aaKnown RBP10.49□□□□□ -0.73
SEC23A-209ENST00000555363 ZNF232Q9UNY5 417 aa10.49□□□□□ -0.73
SEC23A-209ENST00000555363 IQSEC3Q9UPP2 1182 aaPredicted RBP10.49□□□□□ -0.73
SEC23A-209ENST00000555363 MAPTP10636 758 aaKnown RBP10.48□□□□□ -0.73
SEC23A-209ENST00000555363 POM121CA8CG34 1229 aa10.47□□□□□ -0.73
SEC23A-209ENST00000555363 NEURL1BA8MQ27 555 aa10.47□□□□□ -0.73
SEC23A-209ENST00000555363 PIK3R2O00459 728 aa10.47□□□□□ -0.73
SEC23A-209ENST00000555363 MSTNO14793 375 aa10.47□□□□□ -0.73
SEC23A-209ENST00000555363 ARAFP10398 606 aa10.47□□□□□ -0.73
SEC23A-209ENST00000555363 CD33P20138 364 aa10.47□□□□□ -0.73
SEC23A-209ENST00000555363 ATP1A2P50993 1020 aa10.47□□□□□ -0.73
SEC23A-209ENST00000555363 PLA2G4EQ3MJ16 856 aa10.47□□□□□ -0.73
SEC23A-209ENST00000555363 HDGFL1Q5TGJ6 251 aa10.47□□□□□ -0.73
SEC23A-209ENST00000555363 ZIC5Q96T25 663 aa10.47□□□□□ -0.73
SEC23A-209ENST00000555363 SCHIP1Q9P0W5 487 aaPredicted RBP10.47□□□□□ -0.73
SEC23A-209ENST00000555363 PRR12Q9ULL5 1215 aa10.47□□□□□ -0.73
SEC23A-209ENST00000555363 TPCN2Q8NHX9 752 aa10.46□□□□□ -0.73
SEC23A-209ENST00000555363 CHMP3Q9Y3E7 222 aa10.46□□□□□ -0.73
SEC23A-209ENST00000555363 RBM19Q9Y4C8 960 aaKnown RBP10.46□□□□□ -0.73
SEC23A-209ENST00000555363 TNP2Q05952 138 aa10.45□□□□□ -0.74
SEC23A-209ENST00000555363 L3MBTL2Q969R5 705 aa10.45□□□□□ -0.74
SEC23A-209ENST00000555363 USP17L3A6NCW0 530 aa10.44□□□□□ -0.74
SEC23A-209ENST00000555363 USP17L4A6NCW7 530 aa10.44□□□□□ -0.74
SEC23A-209ENST00000555363 EPXP11678 715 aa10.44□□□□□ -0.74
SEC23A-209ENST00000555363 TXLNAP40222 546 aa10.44□□□□□ -0.74
SEC23A-209ENST00000555363 GRIN2CQ14957 1233 aa10.44□□□□□ -0.74
SEC23A-209ENST00000555363 TBCELQ5QJ74 424 aa10.44□□□□□ -0.74
SEC23A-209ENST00000555363 USP17L2Q6R6M4 530 aa10.44□□□□□ -0.74
SEC23A-209ENST00000555363 USP17L1Q7RTZ2 530 aa10.44□□□□□ -0.74
SEC23A-209ENST00000555363 SLC9A9Q8IVB4 645 aa10.44□□□□□ -0.74
SEC23A-209ENST00000555363 TNS4Q8IZW8 715 aa10.44□□□□□ -0.74
SEC23A-209ENST00000555363 FAM157BP0CG42 384 aa10.43□□□□□ -0.74
SEC23A-209ENST00000555363 ADH6P28332 368 aa10.43□□□□□ -0.74
SEC23A-209ENST00000555363 NOS2P35228 1153 aa10.43□□□□□ -0.74
SEC23A-209ENST00000555363 CCDC102BQ68D86 513 aa10.43□□□□□ -0.74
SEC23A-209ENST00000555363 ZNF295-AS1Q8N0V1 137 aa10.43□□□□□ -0.74
SEC23A-209ENST00000555363 BTBD6Q96KE9 485 aa10.43□□□□□ -0.74
SEC23A-209ENST00000555363 SERTM1A2A2V5 107 aa10.42□□□□□ -0.74
SEC23A-209ENST00000555363 TEAD4Q15561 434 aa10.42□□□□□ -0.74
SEC23A-209ENST00000555363 FAM182BQ5T319 152 aa10.42□□□□□ -0.74
SEC23A-209ENST00000555363 MARK1Q9P0L2 795 aa10.42□□□□□ -0.74
SEC23A-209ENST00000555363 ATP9BO43861 1147 aa10.41□□□□□ -0.74
SEC23A-209ENST00000555363 LRRC69Q6ZNQ3 347 aa10.41□□□□□ -0.74
SEC23A-209ENST00000555363 PLEKHM2Q8IWE5 1019 aa10.41□□□□□ -0.74
SEC23A-209ENST00000555363 ADAMTS19Q8TE59 1207 aa10.41□□□□□ -0.74
SEC23A-209ENST00000555363 ZDHHC1Q8WTX9 485 aa10.41□□□□□ -0.74
SEC23A-209ENST00000555363 ALYREFQ86V81 257 aaKnown RBP10.4□□□□□ -0.74
SEC23A-209ENST00000555363 RHPN1Q8TCX5 695 aa10.4□□□□□ -0.74
SEC23A-209ENST00000555363 SPOCK3Q9BQ16 436 aa10.4□□□□□ -0.74
SEC23A-209ENST00000555363 MKRN1Q9UHC7 482 aaKnown RBP10.4□□□□□ -0.74
SEC23A-209ENST00000555363 GNB5O14775 395 aa10.39□□□□□ -0.75
SEC23A-209ENST00000555363 PCBP4P57723 403 aaKnown RBP10.39□□□□□ -0.75
SEC23A-209ENST00000555363 SAMD5Q5TGI4 173 aa10.39□□□□□ -0.75
SEC23A-209ENST00000555363 OGFOD1Q8N543 542 aa10.39□□□□□ -0.75
SEC23A-209ENST00000555363 AVENQ9NQS1 362 aaPredicted RBP10.39□□□□□ -0.75
SEC23A-209ENST00000555363 LAMC2Q13753 1193 aa10.38□□□□□ -0.75
SEC23A-209ENST00000555363 CHSY3Q70JA7 882 aa10.38□□□□□ -0.75
SEC23A-209ENST00000555363 ZNF594Q96JF6 807 aaPredicted RBP10.38□□□□□ -0.75
SEC23A-209ENST00000555363 UCN2Q96RP3 112 aa10.38□□□□□ -0.75
SEC23A-209ENST00000555363 NOP53Q9NZM5 478 aaKnown RBP10.38□□□□□ -0.75
SEC23A-209ENST00000555363 KIAA1024Q9UPX6 916 aa10.38□□□□□ -0.75
SEC23A-209ENST00000555363 PALM3A6NDB9 673 aaPredicted RBP10.37□□□□□ -0.75
SEC23A-209ENST00000555363 ZBTB7BO15156 539 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms