RNA–Protein interactions for RNA: ENST00000555322.5

RPGRIP1-207, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-207ENST00000555322 DNAAF4Q8WXU2 420 aa11.45□□□□□ -0.58
RPGRIP1-207ENST00000555322 SRCIN1Q9C0H9 1055 aa11.45□□□□□ -0.58
RPGRIP1-207ENST00000555322 BMP2KLQ5H9B9 411 aa11.44□□□□□ -0.58
RPGRIP1-207ENST00000555322 SLC4A10Q6U841 1118 aa11.44□□□□□ -0.58
RPGRIP1-207ENST00000555322 C1orf115Q9H7X2 142 aa11.44□□□□□ -0.58
RPGRIP1-207ENST00000555322 F6X3S4 739 aa11.43□□□□□ -0.58
RPGRIP1-207ENST00000555322 SNRPA1P09661 255 aaKnown RBP11.43□□□□□ -0.58
RPGRIP1-207ENST00000555322 CABP4P57796 275 aa11.43□□□□□ -0.58
RPGRIP1-207ENST00000555322 UBE2Q2Q8WVN8 375 aa11.43□□□□□ -0.58
RPGRIP1-207ENST00000555322 CDCA7Q9BWT1 371 aaPredicted RBP11.43□□□□□ -0.58
RPGRIP1-207ENST00000555322 ADCY9O60503 1353 aa11.43□□□□□ -0.58
RPGRIP1-207ENST00000555322 KCPQ6ZWJ8 1503 aa11.43□□□□□ -0.58
RPGRIP1-207ENST00000555322 ZBTB47Q9UFB7 747 aaPredicted RBP11.43□□□□□ -0.58
RPGRIP1-207ENST00000555322 TOM1O60784 492 aa11.42□□□□□ -0.58
RPGRIP1-207ENST00000555322 EIF2S2P20042 333 aaKnown RBP11.42□□□□□ -0.58
RPGRIP1-207ENST00000555322 BEND3Q5T5X7 828 aa11.42□□□□□ -0.58
RPGRIP1-207ENST00000555322 LARP1Q6PKG0 1096 aaKnown RBP11.42□□□□□ -0.58
RPGRIP1-207ENST00000555322 KSR2Q6VAB6 950 aa11.42□□□□□ -0.58
RPGRIP1-207ENST00000555322 NFATC2IPQ8NCF5 419 aa11.42□□□□□ -0.58
RPGRIP1-207ENST00000555322 UPF2Q9HAU5 1272 aaKnown RBP11.42□□□□□ -0.58
RPGRIP1-207ENST00000555322 TOGARAM1Q9Y4F4 1720 aa11.42□□□□□ -0.58
RPGRIP1-207ENST00000555322 UBTFL1P0CB47 393 aaPredicted RBP11.42□□□□□ -0.58
RPGRIP1-207ENST00000555322 ANKRD45Q5TZF3 282 aa11.42□□□□□ -0.58
RPGRIP1-207ENST00000555322 PHAXQ9H814 394 aaKnown RBP11.42□□□□□ -0.58
RPGRIP1-207ENST00000555322 THRAP3Q9Y2W1 955 aaKnown RBP11.41□□□□□ -0.58
RPGRIP1-207ENST00000555322 ATP8B2P98198 1209 aa11.41□□□□□ -0.58
RPGRIP1-207ENST00000555322 NECTIN2Q92692 538 aa11.41□□□□□ -0.58
RPGRIP1-207ENST00000555322 LNPKQ9C0E8 428 aa11.41□□□□□ -0.58
RPGRIP1-207ENST00000555322 BTG4Q9NY30 223 aa11.41□□□□□ -0.58
RPGRIP1-207ENST00000555322 USP44Q9H0E7 712 aa11.4□□□□□ -0.58
RPGRIP1-207ENST00000555322 UTYO14607 1347 aa11.4□□□□□ -0.58
RPGRIP1-207ENST00000555322 COL15A1P39059 1388 aa11.4□□□□□ -0.58
RPGRIP1-207ENST00000555322 PI4KAP2A4QPH2 592 aa11.4□□□□□ -0.58
RPGRIP1-207ENST00000555322 MTX1Q13505 466 aa11.4□□□□□ -0.58
RPGRIP1-207ENST00000555322 PDIA6Q15084 440 aa11.4□□□□□ -0.58
RPGRIP1-207ENST00000555322 PI4KAP1Q8N8J0 262 aa11.4□□□□□ -0.58
RPGRIP1-207ENST00000555322 LINS1Q8NG48 757 aa11.4□□□□□ -0.58
RPGRIP1-207ENST00000555322 ZNF496Q96IT1 587 aaPredicted RBP11.4□□□□□ -0.58
RPGRIP1-207ENST00000555322 STRN4Q9NRL3 753 aa11.4□□□□□ -0.58
RPGRIP1-207ENST00000555322 SSH3Q8TE77 659 aa11.39□□□□□ -0.59
RPGRIP1-207ENST00000555322 NOP58Q9Y2X3 529 aaKnown RBP11.39□□□□□ -0.59
RPGRIP1-207ENST00000555322 CICQ96RK0 1608 aaPredicted RBP11.39□□□□□ -0.59
RPGRIP1-207ENST00000555322 RAB11FIP3O75154 756 aa11.38□□□□□ -0.59
RPGRIP1-207ENST00000555322 POLA2Q14181 598 aa11.38□□□□□ -0.59
RPGRIP1-207ENST00000555322 VSIG10Q8N0Z9 540 aa11.38□□□□□ -0.59
RPGRIP1-207ENST00000555322 OSBPL3Q9H4L5 887 aa11.38□□□□□ -0.59
RPGRIP1-207ENST00000555322 SLIT2O94813 1529 aa11.38□□□□□ -0.59
RPGRIP1-207ENST00000555322 HSP90AB4PQ58FF6 505 aa11.38□□□□□ -0.59
RPGRIP1-207ENST00000555322 LRP10Q7Z4F1 713 aa11.38□□□□□ -0.59
RPGRIP1-207ENST00000555322 MAP3K2Q9Y2U5 619 aa11.38□□□□□ -0.59
RPGRIP1-207ENST00000555322 AOX1Q06278 1338 aa11.38□□□□□ -0.59
RPGRIP1-207ENST00000555322 ARFGEF2Q9Y6D5 1785 aa11.37□□□□□ -0.59
RPGRIP1-207ENST00000555322 NEXNQ0ZGT2 675 aa11.37□□□□□ -0.59
RPGRIP1-207ENST00000555322 SLC39A6Q13433 755 aa11.37□□□□□ -0.59
RPGRIP1-207ENST00000555322 TEX13AQ9BXU3 409 aaPredicted RBP11.37□□□□□ -0.59
RPGRIP1-207ENST00000555322 LRRFIP2Q9Y608 721 aaKnown RBP11.37□□□□□ -0.59
RPGRIP1-207ENST00000555322 PROSER3Q2NL68 480 aa11.36□□□□□ -0.59
RPGRIP1-207ENST00000555322 NUP188Q5SRE5 1749 aa11.36□□□□□ -0.59
RPGRIP1-207ENST00000555322 MSH5O43196 834 aa11.36□□□□□ -0.59
RPGRIP1-207ENST00000555322 PLEKHM2Q8IWE5 1019 aa11.36□□□□□ -0.59
RPGRIP1-207ENST00000555322 TBC1D32Q96NH3 1257 aa11.36□□□□□ -0.59
RPGRIP1-207ENST00000555322 TTC22Q5TAA0 569 aa11.35□□□□□ -0.59
RPGRIP1-207ENST00000555322 METTL22Q9BUU2 404 aaPredicted RBP11.35□□□□□ -0.59
RPGRIP1-207ENST00000555322 LRRCC1Q9C099 1032 aa11.35□□□□□ -0.59
RPGRIP1-207ENST00000555322 TMOD3Q9NYL9 352 aa11.35□□□□□ -0.59
RPGRIP1-207ENST00000555322 PRAMEF22A3QJZ6 481 aa11.35□□□□□ -0.59
RPGRIP1-207ENST00000555322 NPM2Q86SE8 214 aaKnown RBP11.35□□□□□ -0.59
RPGRIP1-207ENST00000555322 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.35□□□□□ -0.59
RPGRIP1-207ENST00000555322 BCL9O00512 1426 aa11.35□□□□□ -0.59
RPGRIP1-207ENST00000555322 JCADQ9P266 1359 aa11.34□□□□□ -0.59
RPGRIP1-207ENST00000555322 SPATA31A1Q5TZJ5 1347 aa11.34□□□□□ -0.59
RPGRIP1-207ENST00000555322 GRM8O00222 908 aa11.34□□□□□ -0.59
RPGRIP1-207ENST00000555322 CDC45O75419 566 aa11.34□□□□□ -0.59
RPGRIP1-207ENST00000555322 ITGB4P16144 1822 aa11.34□□□□□ -0.59
RPGRIP1-207ENST00000555322 SALL3Q9BXA9 1300 aa11.34□□□□□ -0.59
RPGRIP1-207ENST00000555322 BARGINQ6ZT62 677 aa11.34□□□□□ -0.59
RPGRIP1-207ENST00000555322 RIC3Q7Z5B4 369 aa11.34□□□□□ -0.59
RPGRIP1-207ENST00000555322 PLBD2Q8NHP8 589 aa11.34□□□□□ -0.59
RPGRIP1-207ENST00000555322 C9orf78Q9NZ63 289 aaPredicted RBP11.34□□□□□ -0.59
RPGRIP1-207ENST00000555322 ANKRD13DQ6ZTN6 518 aa11.33□□□□□ -0.6
RPGRIP1-207ENST00000555322 ERC1Q8IUD2 1116 aa11.33□□□□□ -0.6
RPGRIP1-207ENST00000555322 DDX54Q8TDD1 881 aaKnown RBP11.33□□□□□ -0.6
RPGRIP1-207ENST00000555322 XAGE3Q8WTP9 111 aa11.33□□□□□ -0.6
RPGRIP1-207ENST00000555322 ZNF831Q5JPB2 1677 aa11.33□□□□□ -0.6
RPGRIP1-207ENST00000555322 PNMA6EA0A0J9YXQ4 647 aa11.33□□□□□ -0.6
RPGRIP1-207ENST00000555322 EXOC5O00471 708 aa11.33□□□□□ -0.6
RPGRIP1-207ENST00000555322 ANXA1P04083 346 aa11.33□□□□□ -0.6
RPGRIP1-207ENST00000555322 STAP2Q9UGK3 403 aa11.33□□□□□ -0.6
RPGRIP1-207ENST00000555322 USP16Q9Y5T5 823 aa11.33□□□□□ -0.6
RPGRIP1-207ENST00000555322 TUBGCP6Q96RT7 1819 aa11.33□□□□□ -0.6
RPGRIP1-207ENST00000555322 DOT1LQ8TEK3 1739 aa11.32□□□□□ -0.6
RPGRIP1-207ENST00000555322 SPATA31A5Q5VU36 1347 aa11.32□□□□□ -0.6
RPGRIP1-207ENST00000555322 SPATA31A7Q8IWB4 1347 aa11.32□□□□□ -0.6
RPGRIP1-207ENST00000555322 NEURL1BA8MQ27 555 aa11.32□□□□□ -0.6
RPGRIP1-207ENST00000555322 NBPF7P0C2Y1 421 aaPredicted RBP11.32□□□□□ -0.6
RPGRIP1-207ENST00000555322 CASC1Q6TDU7 716 aa11.32□□□□□ -0.6
RPGRIP1-207ENST00000555322 COPS6Q7L5N1 327 aa11.32□□□□□ -0.6
RPGRIP1-207ENST00000555322 PPP1R42Q7Z4L9 355 aa11.32□□□□□ -0.6
RPGRIP1-207ENST00000555322 KIF1BPQ96EK5 621 aa11.32□□□□□ -0.6
RPGRIP1-207ENST00000555322 AFDNP55196 1824 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms