RNA–Protein interactions for RNA: ENST00000554961.5

PSMA6-209, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-209ENST00000554961 ERFEQ4G0M1 354 aa11.17□□□□□ -0.62
PSMA6-209ENST00000554961 CNTROBQ8N137 903 aa11.17□□□□□ -0.62
PSMA6-209ENST00000554961 TRPM7Q96QT4 1865 aa11.17□□□□□ -0.62
PSMA6-209ENST00000554961 MAP1SQ66K74 1059 aaPredicted RBP11.16□□□□□ -0.62
PSMA6-209ENST00000554961 ZCRB1Q8TBF4 217 aaKnown RBP11.16□□□□□ -0.62
PSMA6-209ENST00000554961 DDX21Q9NR30 783 aaKnown RBP eCLIP11.16□□□□□ -0.62
PSMA6-209ENST00000554961 ZBTB12Q9Y330 459 aaPredicted RBP11.16□□□□□ -0.62
PSMA6-209ENST00000554961 EAPPQ56P03 285 aaPredicted RBP11.15□□□□□ -0.62
PSMA6-209ENST00000554961 CARD11Q9BXL7 1154 aa11.15□□□□□ -0.62
PSMA6-209ENST00000554961 HPS5Q9UPZ3 1129 aa11.15□□□□□ -0.62
PSMA6-209ENST00000554961 COLQQ9Y215 455 aaPredicted RBP11.14□□□□□ -0.63
PSMA6-209ENST00000554961 TLL2Q9Y6L7 1015 aa11.14□□□□□ -0.63
PSMA6-209ENST00000554961 SMG6Q86US8 1419 aaKnown RBP11.14□□□□□ -0.63
PSMA6-209ENST00000554961 COL5A3P25940 1745 aaPredicted RBP11.14□□□□□ -0.63
PSMA6-209ENST00000554961 BRCA2P51587 3418 aa11.14□□□□□ -0.63
PSMA6-209ENST00000554961 SPTBN5Q9NRC6 3674 aaKnown RBP11.14□□□□□ -0.63
PSMA6-209ENST00000554961 INSRP06213 1382 aa11.14□□□□□ -0.63
PSMA6-209ENST00000554961 TTC21BQ7Z4L5 1316 aa11.13□□□□□ -0.63
PSMA6-209ENST00000554961 TTC21AQ8NDW8 1320 aa11.13□□□□□ -0.63
PSMA6-209ENST00000554961 LOC102724428A0A0B4J2F2 783 aa11.13□□□□□ -0.63
PSMA6-209ENST00000554961 SIK1P57059 783 aa11.13□□□□□ -0.63
PSMA6-209ENST00000554961 TRAPPC3LQ5T215 181 aa11.13□□□□□ -0.63
PSMA6-209ENST00000554961 MPRIPQ6WCQ1 1025 aa11.13□□□□□ -0.63
PSMA6-209ENST00000554961 CLEC11AQ9Y240 323 aa11.13□□□□□ -0.63
PSMA6-209ENST00000554961 ZNF831Q5JPB2 1677 aa11.13□□□□□ -0.63
PSMA6-209ENST00000554961 SRPK2P78362 688 aaKnown RBP11.12□□□□□ -0.63
PSMA6-209ENST00000554961 DDR1Q08345 913 aa11.12□□□□□ -0.63
PSMA6-209ENST00000554961 ITPK1Q13572 414 aa11.12□□□□□ -0.63
PSMA6-209ENST00000554961 CIAPIN1Q6FI81 312 aa11.12□□□□□ -0.63
PSMA6-209ENST00000554961 CTU1Q7Z7A3 348 aaKnown RBP11.12□□□□□ -0.63
PSMA6-209ENST00000554961 PNMA8AQ86V59 439 aaPredicted RBP11.12□□□□□ -0.63
PSMA6-209ENST00000554961 VCANP13611 3396 aa11.11□□□□□ -0.63
PSMA6-209ENST00000554961 CENPJQ9HC77 1338 aaPredicted RBP11.11□□□□□ -0.63
PSMA6-209ENST00000554961 LTBP3Q9NS15 1303 aa11.11□□□□□ -0.63
PSMA6-209ENST00000554961 RGPD2P0DJD1 1756 aa11.11□□□□□ -0.63
PSMA6-209ENST00000554961 ZEB1P37275 1124 aaPredicted RBP11.11□□□□□ -0.63
PSMA6-209ENST00000554961 ARHGEF1Q92888 912 aaKnown RBP11.11□□□□□ -0.63
PSMA6-209ENST00000554961 SAGE1Q9NXZ1 904 aa11.11□□□□□ -0.63
PSMA6-209ENST00000554961 CABP1Q9NZU7 370 aa11.11□□□□□ -0.63
PSMA6-209ENST00000554961 RTCBQ9Y3I0 505 aaKnown RBP11.11□□□□□ -0.63
PSMA6-209ENST00000554961 NRXN2Q9P2S2 1712 aa11.11□□□□□ -0.63
PSMA6-209ENST00000554961 SCN11AQ9UI33 1791 aa11.11□□□□□ -0.63
PSMA6-209ENST00000554961 EPHX2P34913 555 aa11.1□□□□□ -0.63
PSMA6-209ENST00000554961 TTLL6Q8N841 843 aa11.1□□□□□ -0.63
PSMA6-209ENST00000554961 HHIPL1Q96JK4 782 aa11.1□□□□□ -0.63
PSMA6-209ENST00000554961 HACL1Q9UJ83 578 aa11.1□□□□□ -0.63
PSMA6-209ENST00000554961 USP31Q70CQ4 1352 aa11.1□□□□□ -0.63
PSMA6-209ENST00000554961 MON2Q7Z3U7 1717 aa11.09□□□□□ -0.63
PSMA6-209ENST00000554961 CEP290O15078 2479 aa11.09□□□□□ -0.63
PSMA6-209ENST00000554961 RBBP6Q7Z6E9 1792 aaKnown RBP11.09□□□□□ -0.63
PSMA6-209ENST00000554961 CST9Q5W186 159 aa11.09□□□□□ -0.63
PSMA6-209ENST00000554961 COL25A1Q9BXS0 654 aaPredicted RBP11.09□□□□□ -0.63
PSMA6-209ENST00000554961 AFDNP55196 1824 aaKnown RBP11.09□□□□□ -0.63
PSMA6-209ENST00000554961 CGNL1Q0VF96 1302 aa11.09□□□□□ -0.63
PSMA6-209ENST00000554961 CD163L1Q9NR16 1453 aa11.08□□□□□ -0.64
PSMA6-209ENST00000554961 SBNO2Q9Y2G9 1366 aa11.08□□□□□ -0.64
PSMA6-209ENST00000554961 RFC4P35249 363 aa11.08□□□□□ -0.64
PSMA6-209ENST00000554961 CDCA8Q53HL2 280 aa11.08□□□□□ -0.64
PSMA6-209ENST00000554961 SAPCD2Q86UD0 394 aa11.08□□□□□ -0.64
PSMA6-209ENST00000554961 PUS7Q96PZ0 661 aaKnown RBP11.08□□□□□ -0.64
PSMA6-209ENST00000554961 CABP2Q9NPB3 220 aa11.08□□□□□ -0.64
PSMA6-209ENST00000554961 HTTP42858 3142 aa11.07□□□□□ -0.64
PSMA6-209ENST00000554961 KDRP35968 1356 aa11.07□□□□□ -0.64
PSMA6-209ENST00000554961 FMR1Q06787 632 aaKnown RBP eCLIP11.07□□□□□ -0.64
PSMA6-209ENST00000554961 EVC2Q86UK5 1308 aa11.07□□□□□ -0.64
PSMA6-209ENST00000554961 PCDH11XQ9BZA7 1347 aa11.07□□□□□ -0.64
PSMA6-209ENST00000554961 PCDH11YQ9BZA8 1340 aa11.07□□□□□ -0.64
PSMA6-209ENST00000554961 POLRMTO00411 1230 aaKnown RBP11.06□□□□□ -0.64
PSMA6-209ENST00000554961 ATP6V1AP38606 617 aa11.06□□□□□ -0.64
PSMA6-209ENST00000554961 PKN2Q16513 984 aaKnown RBP11.06□□□□□ -0.64
PSMA6-209ENST00000554961 PIGBQ92521 554 aa11.06□□□□□ -0.64
PSMA6-209ENST00000554961 EIF4G2P78344 907 aaKnown RBP eCLIP11.05□□□□□ -0.64
PSMA6-209ENST00000554961 NOGQ13253 232 aa11.05□□□□□ -0.64
PSMA6-209ENST00000554961 FKBP8Q14318 412 aa11.05□□□□□ -0.64
PSMA6-209ENST00000554961 AKAP4Q5JQC9 854 aa11.05□□□□□ -0.64
PSMA6-209ENST00000554961 TAOK3Q9H2K8 898 aa11.05□□□□□ -0.64
PSMA6-209ENST00000554961 MAP3K19Q56UN5 1328 aa11.05□□□□□ -0.64
PSMA6-209ENST00000554961 CACNA1AO00555 2505 aa11.04□□□□□ -0.64
PSMA6-209ENST00000554961 COL11A2P13942 1736 aaPredicted RBP11.04□□□□□ -0.64
PSMA6-209ENST00000554961 ZNF692Q9BU19 519 aaPredicted RBP11.04□□□□□ -0.64
PSMA6-209ENST00000554961 PRDM6Q9NQX0 595 aa11.04□□□□□ -0.64
PSMA6-209ENST00000554961 LAMA3Q16787 3333 aa11.04□□□□□ -0.64
PSMA6-209ENST00000554961 RNF123Q5XPI4 1314 aa11.04□□□□□ -0.64
PSMA6-209ENST00000554961 CNTNAP4Q9C0A0 1308 aa11.04□□□□□ -0.64
PSMA6-209ENST00000554961 ZNF541Q9H0D2 1346 aa11.04□□□□□ -0.64
PSMA6-209ENST00000554961 USP42Q9H9J4 1324 aaKnown RBP11.04□□□□□ -0.64
PSMA6-209ENST00000554961 BCORQ6W2J9 1755 aa11.03□□□□□ -0.64
PSMA6-209ENST00000554961 RC3H1Q5TC82 1133 aaKnown RBP11.03□□□□□ -0.64
PSMA6-209ENST00000554961 IP6K1Q92551 441 aa11.03□□□□□ -0.64
PSMA6-209ENST00000554961 OTUD5Q96G74 571 aa11.03□□□□□ -0.64
PSMA6-209ENST00000554961 RBM42Q9BTD8 480 aaKnown RBP11.03□□□□□ -0.64
PSMA6-209ENST00000554961 ARFGEF2Q9Y6D5 1785 aa11.03□□□□□ -0.64
PSMA6-209ENST00000554961 ST20-MTHFSA0A0A6YYL1 179 aa11.02□□□□□ -0.65
PSMA6-209ENST00000554961 TRAF5O00463 557 aa11.02□□□□□ -0.65
PSMA6-209ENST00000554961 RPS6KA4O75676 772 aa11.02□□□□□ -0.65
PSMA6-209ENST00000554961 LTV1Q96GA3 475 aaPredicted RBP11.02□□□□□ -0.65
PSMA6-209ENST00000554961 ZIC5Q96T25 663 aa11.02□□□□□ -0.65
PSMA6-209ENST00000554961 MYH14Q7Z406 1995 aaKnown RBP11.02□□□□□ -0.65
PSMA6-209ENST00000554961 PAPPA2Q9BXP8 1791 aa11.02□□□□□ -0.65
PSMA6-209ENST00000554961 TM4SF1P30408 202 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms