RNA–Protein interactions for RNA: ENST00000554929.1

SRSF5-208, Transcript of serine and arginine rich splicing factor 5, human

TSL 2

Gene SRSF5, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF5-208	ENST00000554929	KIAA1551	Q9HCM1	1747 aa		14.01	□□□□□ -0.17
SRSF5-208	ENST00000554929	TOGARAM1	Q9Y4F4	1720 aa		14.01	□□□□□ -0.17
SRSF5-208	ENST00000554929	KTN1	Q86UP2	1357 aa	Known RBP	14	□□□□□ -0.17
SRSF5-208	ENST00000554929	KIF13B	Q9NQT8	1826 aa		14	□□□□□ -0.17
SRSF5-208	ENST00000554929	SSFA2	P28290	1259 aa		14	□□□□□ -0.17
SRSF5-208	ENST00000554929	MPRIP	Q6WCQ1	1025 aa		14	□□□□□ -0.17
SRSF5-208	ENST00000554929	RNF25	Q96BH1	459 aa	Predicted RBP	14	□□□□□ -0.17
SRSF5-208	ENST00000554929	NSD3	Q9BZ95	1437 aa		13.99	□□□□□ -0.17
SRSF5-208	ENST00000554929	KIF7	Q2M1P5	1343 aa		13.99	□□□□□ -0.17
SRSF5-208	ENST00000554929	CCDC85C	A6NKD9	419 aa		13.99	□□□□□ -0.17
SRSF5-208	ENST00000554929	VEGFA	P15692	232 aa	Predicted RBP	13.99	□□□□□ -0.17
SRSF5-208	ENST00000554929	KIAA1210	Q9ULL0	1709 aa		13.98	□□□□□ -0.17
SRSF5-208	ENST00000554929	EVC2	Q86UK5	1308 aa		13.98	□□□□□ -0.17
SRSF5-208	ENST00000554929	LBX1	P52954	281 aa		13.98	□□□□□ -0.17
SRSF5-208	ENST00000554929	NME9	Q86XW9	330 aa		13.98	□□□□□ -0.17
SRSF5-208	ENST00000554929	NEFL	P07196	543 aa		13.97	□□□□□ -0.17
SRSF5-208	ENST00000554929	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.97	□□□□□ -0.17
SRSF5-208	ENST00000554929	CCDC87	Q9NVE4	849 aa		13.97	□□□□□ -0.17
SRSF5-208	ENST00000554929	PIM2	Q9P1W9	311 aa		13.97	□□□□□ -0.17
SRSF5-208	ENST00000554929	GNPAT	O15228	680 aa		13.96	□□□□□ -0.17
SRSF5-208	ENST00000554929	KCNA3	P22001	575 aa		13.96	□□□□□ -0.17
SRSF5-208	ENST00000554929	IP6K1	Q92551	441 aa		13.96	□□□□□ -0.17
SRSF5-208	ENST00000554929	SMARCC1	Q92922	1105 aa	Predicted RBP	13.96	□□□□□ -0.17
SRSF5-208	ENST00000554929	ARFGEF1	Q9Y6D6	1849 aa		13.96	□□□□□ -0.17
SRSF5-208	ENST00000554929	USP31	Q70CQ4	1352 aa		13.96	□□□□□ -0.18
SRSF5-208	ENST00000554929	BRCA1	P38398	1863 aa	Known RBP	13.95	□□□□□ -0.18
SRSF5-208	ENST00000554929	MKRN3	Q13064	507 aa	Known RBP	13.95	□□□□□ -0.18
SRSF5-208	ENST00000554929	DALRD3	Q5D0E6	543 aa	Known RBP	13.95	□□□□□ -0.18
SRSF5-208	ENST00000554929	LINC00116	Q8NCU8	138 aa		13.95	□□□□□ -0.18
SRSF5-208	ENST00000554929	DCAF5	Q96JK2	942 aa		13.95	□□□□□ -0.18
SRSF5-208	ENST00000554929	SBF1	O95248	1867 aa		13.95	□□□□□ -0.18
SRSF5-208	ENST00000554929	MEGF6	O75095	1541 aa		13.95	□□□□□ -0.18
SRSF5-208	ENST00000554929	GLTPD2	A6NH11	291 aa		13.94	□□□□□ -0.18
SRSF5-208	ENST00000554929	RGS19	P49795	217 aa		13.94	□□□□□ -0.18
SRSF5-208	ENST00000554929	CARD11	Q9BXL7	1154 aa		13.94	□□□□□ -0.18
SRSF5-208	ENST00000554929	TMF1	P82094	1093 aa		13.93	□□□□□ -0.18
SRSF5-208	ENST00000554929	NLGN1	Q8N2Q7	840 aa		13.93	□□□□□ -0.18
SRSF5-208	ENST00000554929	FAM208A	Q9UK61	1670 aa	Known RBP	13.93	□□□□□ -0.18
SRSF5-208	ENST00000554929	PARP3	Q9Y6F1	533 aa		13.92	□□□□□ -0.18
SRSF5-208	ENST00000554929	RGPD2	P0DJD1	1756 aa		13.91	□□□□□ -0.18
SRSF5-208	ENST00000554929	LOC102724428	A0A0B4J2F2	783 aa		13.91	□□□□□ -0.18
SRSF5-208	ENST00000554929	SIK1	P57059	783 aa		13.91	□□□□□ -0.18
SRSF5-208	ENST00000554929	RASSF7	Q02833	373 aa		13.91	□□□□□ -0.18
SRSF5-208	ENST00000554929	GOLGA2	Q08379	1002 aa		13.91	□□□□□ -0.18
SRSF5-208	ENST00000554929	CFAP44	Q96MT7	982 aa		13.91	□□□□□ -0.18
SRSF5-208	ENST00000554929	CNTNAP1	P78357	1384 aa		13.91	□□□□□ -0.18
SRSF5-208	ENST00000554929	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
SRSF5-208	ENST00000554929	USHBP1	Q8N6Y0	703 aa		13.9	□□□□□ -0.18
SRSF5-208	ENST00000554929	RAPGEF4	Q8WZA2	1011 aa		13.9	□□□□□ -0.18
SRSF5-208	ENST00000554929	WBP1L	Q9NX94	342 aa		13.9	□□□□□ -0.18
SRSF5-208	ENST00000554929	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.9	□□□□□ -0.18	1e-42	■■■□□ 16.2
SRSF5-208	ENST00000554929	HSPA8	P11142	646 aa	Known RBP	13.89	□□□□□ -0.19
SRSF5-208	ENST00000554929	VEGFB	P49765	207 aa		13.89	□□□□□ -0.19
SRSF5-208	ENST00000554929	TRAPPC3L	Q5T215	181 aa		13.89	□□□□□ -0.19
SRSF5-208	ENST00000554929	PIGB	Q92521	554 aa		13.89	□□□□□ -0.19
SRSF5-208	ENST00000554929	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.89	□□□□□ -0.19
SRSF5-208	ENST00000554929	MON2	Q7Z3U7	1717 aa		13.88	□□□□□ -0.19
SRSF5-208	ENST00000554929	POTEC	B2RU33	542 aa		13.88	□□□□□ -0.19
SRSF5-208	ENST00000554929	RIOK3	O14730	519 aa	Known RBP	13.88	□□□□□ -0.19
SRSF5-208	ENST00000554929	TAT	P17735	454 aa	Predicted RBP	13.88	□□□□□ -0.19
SRSF5-208	ENST00000554929	CHRNA5	P30532	468 aa		13.88	□□□□□ -0.19
SRSF5-208	ENST00000554929	ATP6V1A	P38606	617 aa		13.88	□□□□□ -0.19
SRSF5-208	ENST00000554929	AMPH	P49418	695 aa		13.88	□□□□□ -0.19
SRSF5-208	ENST00000554929	ITPK1	Q13572	414 aa		13.88	□□□□□ -0.19
SRSF5-208	ENST00000554929	SLAIN1	Q8ND83	568 aa		13.88	□□□□□ -0.19
SRSF5-208	ENST00000554929	CGNL1	Q0VF96	1302 aa		13.88	□□□□□ -0.19
SRSF5-208	ENST00000554929	PCDH11X	Q9BZA7	1347 aa		13.88	□□□□□ -0.19
SRSF5-208	ENST00000554929	PCDH11Y	Q9BZA8	1340 aa		13.88	□□□□□ -0.19
SRSF5-208	ENST00000554929	ITGB4	P16144	1822 aa		13.87	□□□□□ -0.19
SRSF5-208	ENST00000554929	C4A	P0C0L4	1744 aa		13.87	□□□□□ -0.19
SRSF5-208	ENST00000554929	POTEM	A6NI47	508 aa		13.87	□□□□□ -0.19
SRSF5-208	ENST00000554929	LMNB1	P20700	586 aa		13.87	□□□□□ -0.19
SRSF5-208	ENST00000554929	HOXC9	P31274	260 aa		13.87	□□□□□ -0.19
SRSF5-208	ENST00000554929	NBPF6	Q5VWK0	638 aa		13.87	□□□□□ -0.19
SRSF5-208	ENST00000554929	NBPF4	Q96M43	638 aa		13.87	□□□□□ -0.19
SRSF5-208	ENST00000554929	MRS2	Q9HD23	443 aa		13.87	□□□□□ -0.19
SRSF5-208	ENST00000554929	RTCB	Q9Y3I0	505 aa	Known RBP	13.87	□□□□□ -0.19
SRSF5-208	ENST00000554929	ERICH6B	Q5W0A0	696 aa		13.86	□□□□□ -0.19
SRSF5-208	ENST00000554929	ARHGEF1	Q92888	912 aa	Known RBP	13.86	□□□□□ -0.19
SRSF5-208	ENST00000554929	SBNO2	Q9Y2G9	1366 aa		13.85	□□□□□ -0.19
SRSF5-208	ENST00000554929	GYS1	P13807	737 aa		13.85	□□□□□ -0.19
SRSF5-208	ENST00000554929	FBLN1	P23142	703 aa		13.85	□□□□□ -0.19
SRSF5-208	ENST00000554929	RFC4	P35249	363 aa		13.85	□□□□□ -0.19
SRSF5-208	ENST00000554929	DPY19L2	Q6NUT2	758 aa		13.85	□□□□□ -0.19
SRSF5-208	ENST00000554929	POTEG	Q6S5H5	508 aa		13.85	□□□□□ -0.19
SRSF5-208	ENST00000554929	MAP3K19	Q56UN5	1328 aa		13.85	□□□□□ -0.19
SRSF5-208	ENST00000554929	MAP2	P11137	1827 aa	Known RBP	13.85	□□□□□ -0.19
SRSF5-208	ENST00000554929	CYP27B1	O15528	508 aa		13.84	□□□□□ -0.19
SRSF5-208	ENST00000554929	TMC1	Q8TDI8	760 aa		13.84	□□□□□ -0.19
SRSF5-208	ENST00000554929	FAM163A	Q96GL9	167 aa	Predicted RBP	13.84	□□□□□ -0.19
SRSF5-208	ENST00000554929	ZBED9	Q6R2W3	1325 aa		13.84	□□□□□ -0.19
SRSF5-208	ENST00000554929	CCDC88A	Q3V6T2	1871 aa		13.83	□□□□□ -0.2
SRSF5-208	ENST00000554929	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.83	□□□□□ -0.2
SRSF5-208	ENST00000554929	ASAP1	Q9ULH1	1129 aa		13.83	□□□□□ -0.2
SRSF5-208	ENST00000554929	KDM6A	O15550	1401 aa	Predicted RBP	13.82	□□□□□ -0.2
SRSF5-208	ENST00000554929	ST20-MTHFS	A0A0A6YYL1	179 aa		13.82	□□□□□ -0.2
SRSF5-208	ENST00000554929	RALBP1	Q15311	655 aa		13.82	□□□□□ -0.2
SRSF5-208	ENST00000554929	VIRMA	Q69YN4	1812 aa	Known RBP	13.82	□□□□□ -0.2
SRSF5-208	ENST00000554929	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.81	□□□□□ -0.2
SRSF5-208	ENST00000554929	TMEM88B	A6NKF7	163 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms