RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 TTC5Q8N0Z6 440 aa29.98■■■□□ 2.39
GABRB3-206ENST00000554556 CNGB1Q14028 1251 aaPredicted RBP29.97■■■□□ 2.39
GABRB3-206ENST00000554556 GAS2L2Q8NHY3 880 aa29.97■■■□□ 2.39
GABRB3-206ENST00000554556 ZBTB1Q9Y2K1 713 aa29.97■■■□□ 2.39
GABRB3-206ENST00000554556 COL15A1P39059 1388 aa29.97■■■□□ 2.39
GABRB3-206ENST00000554556 STARD3NLO95772 234 aa29.95■■■□□ 2.39
GABRB3-206ENST00000554556 CHRNA5P30532 468 aa29.95■■■□□ 2.39
GABRB3-206ENST00000554556 TEFQ10587 303 aa29.95■■■□□ 2.39
GABRB3-206ENST00000554556 C9orf131Q5VYM1 1079 aa29.95■■■□□ 2.39
GABRB3-206ENST00000554556 GNAT3A8MTJ3 354 aa29.94■■■□□ 2.38
GABRB3-206ENST00000554556 TOMM70O94826 608 aa29.93■■■□□ 2.38
GABRB3-206ENST00000554556 NFIXQ14938 502 aa29.93■■■□□ 2.38
GABRB3-206ENST00000554556 UBR2Q8IWV8 1755 aa29.92■■■□□ 2.38
GABRB3-206ENST00000554556 CANXP27824 592 aaKnown RBP29.92■■■□□ 2.38
GABRB3-206ENST00000554556 TEX13AQ9BXU3 409 aaPredicted RBP29.92■■■□□ 2.38
GABRB3-206ENST00000554556 AFDNP55196 1824 aaKnown RBP29.92■■■□□ 2.38
GABRB3-206ENST00000554556 A0A087WZG4 1122 aa29.91■■■□□ 2.38
GABRB3-206ENST00000554556 COL3A1P02461 1466 aaPredicted RBP29.91■■■□□ 2.38
GABRB3-206ENST00000554556 SERPINB2P05120 415 aa29.9■■■□□ 2.38
GABRB3-206ENST00000554556 IL17REQ8NFR9 667 aa29.9■■■□□ 2.38
GABRB3-206ENST00000554556 CFAP53Q96M91 514 aa29.89■■■□□ 2.38
GABRB3-206ENST00000554556 ZNF790Q6PG37 636 aa29.88■■■□□ 2.37
GABRB3-206ENST00000554556 BCL2L12Q9HB09 334 aa29.88■■■□□ 2.37
GABRB3-206ENST00000554556 NMRK2Q9NPI5 230 aa29.88■■■□□ 2.37
GABRB3-206ENST00000554556 RNF181Q9P0P0 153 aa29.88■■■□□ 2.37
GABRB3-206ENST00000554556 EIF5P55010 431 aaKnown RBP29.87■■■□□ 2.37
GABRB3-206ENST00000554556 ZNF496Q96IT1 587 aaPredicted RBP29.87■■■□□ 2.37
GABRB3-206ENST00000554556 NRXN2Q9P2S2 1712 aa29.86■■■□□ 2.37
GABRB3-206ENST00000554556 APLP1P51693 650 aa29.86■■■□□ 2.37
GABRB3-206ENST00000554556 C16orf71Q8IYS4 520 aaPredicted RBP29.86■■■□□ 2.37
GABRB3-206ENST00000554556 KDM2BQ8NHM5 1336 aa29.86■■■□□ 2.37
GABRB3-206ENST00000554556 HEG1Q9ULI3 1381 aa29.86■■■□□ 2.37
GABRB3-206ENST00000554556 SBF1O95248 1867 aa29.85■■■□□ 2.37
GABRB3-206ENST00000554556 NUDCQ9Y266 331 aa29.84■■■□□ 2.37
GABRB3-206ENST00000554556 NPM2Q86SE8 214 aaKnown RBP29.83■■■□□ 2.37
GABRB3-206ENST00000554556 FMNL2Q96PY5 1086 aa29.83■■■□□ 2.37
GABRB3-206ENST00000554556 SIPA1L3O60292 1781 aaPredicted RBP29.82■■■□□ 2.36
GABRB3-206ENST00000554556 BICDL1Q6ZP65 573 aa29.82■■■□□ 2.36
GABRB3-206ENST00000554556 TTLL6Q8N841 843 aa29.82■■■□□ 2.36
GABRB3-206ENST00000554556 H0YIN7 160 aa29.81■■■□□ 2.36
GABRB3-206ENST00000554556 C2CD5Q86YS7 1000 aa29.81■■■□□ 2.36
GABRB3-206ENST00000554556 RBM46Q8TBY0 533 aaKnown RBP29.81■■■□□ 2.36
GABRB3-206ENST00000554556 PRKAR2BP31323 418 aa29.8■■■□□ 2.36
GABRB3-206ENST00000554556 IL6STP40189 918 aaPredicted RBP29.8■■■□□ 2.36
GABRB3-206ENST00000554556 ZNF330Q9Y3S2 320 aaPredicted RBP29.8■■■□□ 2.36
GABRB3-206ENST00000554556 PDZRN3Q9UPQ7 1066 aa29.79■■■□□ 2.36
GABRB3-206ENST00000554556 DLEC1Q9Y238 1755 aa29.79■■■□□ 2.36
GABRB3-206ENST00000554556 CEP350Q5VT06 3117 aa29.78■■■□□ 2.36
GABRB3-206ENST00000554556 CEMIPQ8WUJ3 1361 aa29.78■■■□□ 2.36
GABRB3-206ENST00000554556 BTBD11A6QL63 1104 aa29.78■■■□□ 2.36
GABRB3-206ENST00000554556 PHACTR3Q96KR7 559 aa29.78■■■□□ 2.36
GABRB3-206ENST00000554556 RSPH6AQ9H0K4 717 aa29.78■■■□□ 2.36
GABRB3-206ENST00000554556 ZC3H4Q9UPT8 1303 aaKnown RBP29.77■■■□□ 2.36
GABRB3-206ENST00000554556 TBC1D9BQ66K14 1250 aa29.77■■■□□ 2.36
GABRB3-206ENST00000554556 TBC1D2BQ9UPU7 963 aa29.77■■■□□ 2.36
GABRB3-206ENST00000554556 LMNB1P20700 586 aa29.75■■■□□ 2.35
GABRB3-206ENST00000554556 RASSF7Q02833 373 aa29.75■■■□□ 2.35
GABRB3-206ENST00000554556 RTF1Q92541 710 aaKnown RBP29.75■■■□□ 2.35
GABRB3-206ENST00000554556 RRAGCQ9HB90 399 aa29.75■■■□□ 2.35
GABRB3-206ENST00000554556 A1BGP04217 495 aa29.74■■■□□ 2.35
GABRB3-206ENST00000554556 U2AF1L5P0DN76 240 aaPredicted RBP29.74■■■□□ 2.35
GABRB3-206ENST00000554556 PDE6BP35913 854 aa29.74■■■□□ 2.35
GABRB3-206ENST00000554556 U2AF1Q01081 240 aaKnown RBP eCLIP29.74■■■□□ 2.35
GABRB3-206ENST00000554556 FSTL1Q12841 308 aa29.74■■■□□ 2.35
GABRB3-206ENST00000554556 IFFO2Q5TF58 517 aa29.74■■■□□ 2.35
GABRB3-206ENST00000554556 BRIP1Q9BX63 1249 aa29.74■■■□□ 2.35
GABRB3-206ENST00000554556 TNRC6CQ9HCJ0 1690 aaKnown RBP29.72■■■□□ 2.35
GABRB3-206ENST00000554556 SETDB2Q96T68 719 aa29.72■■■□□ 2.35
GABRB3-206ENST00000554556 CARMIL3Q8ND23 1372 aa29.72■■■□□ 2.35
GABRB3-206ENST00000554556 SCN7AQ01118 1682 aa29.72■■■□□ 2.35
GABRB3-206ENST00000554556 KCNQ3O43525 872 aa29.71■■■□□ 2.35
GABRB3-206ENST00000554556 PPP2R1AP30153 589 aa29.71■■■□□ 2.35
GABRB3-206ENST00000554556 ZNF622Q969S3 477 aaKnown RBP eCLIP29.71■■■□□ 2.35
GABRB3-206ENST00000554556 CCDC88AQ3V6T2 1871 aa29.71■■■□□ 2.35
GABRB3-206ENST00000554556 NPHP1O15259 732 aa29.7■■■□□ 2.35
GABRB3-206ENST00000554556 PRR5LQ6MZQ0 368 aa29.69■■■□□ 2.34
GABRB3-206ENST00000554556 ANKRD31Q8N7Z5 1873 aa29.68■■■□□ 2.34
GABRB3-206ENST00000554556 CAMTA2O94983 1202 aa29.68■■■□□ 2.34
GABRB3-206ENST00000554556 DZIP3Q86Y13 1208 aaKnown RBP29.68■■■□□ 2.34
GABRB3-206ENST00000554556 DNAJC5GQ8N7S2 189 aa29.68■■■□□ 2.34
GABRB3-206ENST00000554556 USP16Q9Y5T5 823 aa29.68■■■□□ 2.34
GABRB3-206ENST00000554556 GLTPD2A6NH11 291 aa29.67■■■□□ 2.34
GABRB3-206ENST00000554556 HTATSF1O43719 755 aaKnown RBP29.66■■■□□ 2.34
GABRB3-206ENST00000554556 SNRPA1P09661 255 aaKnown RBP29.66■■■□□ 2.34
GABRB3-206ENST00000554556 CNBD1Q8NA66 436 aa29.66■■■□□ 2.34
GABRB3-206ENST00000554556 ST5P78524 1137 aa29.65■■■□□ 2.34
GABRB3-206ENST00000554556 MCM10Q7L590 875 aa29.65■■■□□ 2.34
GABRB3-206ENST00000554556 SMC1BQ8NDV3 1235 aa29.65■■■□□ 2.34
GABRB3-206ENST00000554556 WDR90Q96KV7 1748 aa29.65■■■□□ 2.34
GABRB3-206ENST00000554556 NFKBIEO00221 500 aa29.64■■■□□ 2.34
GABRB3-206ENST00000554556 VEGFAP15692 232 aaPredicted RBP29.64■■■□□ 2.34
GABRB3-206ENST00000554556 CCDC24Q8N4L8 307 aa29.64■■■□□ 2.34
GABRB3-206ENST00000554556 PRELPP51888 382 aa29.63■■■□□ 2.33
GABRB3-206ENST00000554556 CLEC4GQ6UXB4 293 aa29.63■■■□□ 2.33
GABRB3-206ENST00000554556 CNKSR1Q969H4 720 aa29.63■■■□□ 2.33
GABRB3-206ENST00000554556 C21orf2O43822 256 aa29.62■■■□□ 2.33
GABRB3-206ENST00000554556 NEFMP07197 916 aa29.62■■■□□ 2.33
GABRB3-206ENST00000554556 DPY19L2Q6NUT2 758 aa29.62■■■□□ 2.33
GABRB3-206ENST00000554556 ZNF652Q9Y2D9 606 aa29.62■■■□□ 2.33
GABRB3-206ENST00000554556 ZNF219Q9P2Y4 722 aaPredicted RBP29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms