RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 CLEC17AQ6ZS10 378 aa19.1■□□□□ 0.65
ARHGEF40-203ENST00000554514 RHPN1Q8TCX5 695 aa19.1■□□□□ 0.65
ARHGEF40-203ENST00000554514 SSH3Q8TE77 659 aa19.1■□□□□ 0.65
ARHGEF40-203ENST00000554514 DNAAF4Q8WXU2 420 aa19.1■□□□□ 0.65
ARHGEF40-203ENST00000554514 ISY1Q9ULR0 285 aaKnown RBP19.1■□□□□ 0.65
ARHGEF40-203ENST00000554514 ANKLE2Q86XL3 938 aa19.09■□□□□ 0.65
ARHGEF40-203ENST00000554514 NASPP49321 788 aaPredicted RBP19.09■□□□□ 0.65
ARHGEF40-203ENST00000554514 ORAI2Q96SN7 254 aa19.09■□□□□ 0.65
ARHGEF40-203ENST00000554514 STAP2Q9UGK3 403 aa19.09■□□□□ 0.65
ARHGEF40-203ENST00000554514 LTN1O94822 1766 aa19.09■□□□□ 0.65
ARHGEF40-203ENST00000554514 PRAMEF22A3QJZ6 481 aa19.08■□□□□ 0.64
ARHGEF40-203ENST00000554514 TPRNQ4KMQ1 711 aa19.08■□□□□ 0.64
ARHGEF40-203ENST00000554514 LARP6Q9BRS8 491 aaKnown RBP19.08■□□□□ 0.64
ARHGEF40-203ENST00000554514 BABAM1Q9NWV8 329 aa19.08■□□□□ 0.64
ARHGEF40-203ENST00000554514 ZSCAN23Q3MJ62 389 aa19.07■□□□□ 0.64
ARHGEF40-203ENST00000554514 BEND3Q5T5X7 828 aa19.07■□□□□ 0.64
ARHGEF40-203ENST00000554514 ERBB4Q15303 1308 aa19.07■□□□□ 0.64
ARHGEF40-203ENST00000554514 C1orf141Q5JVX7 400 aa19.07■□□□□ 0.64
ARHGEF40-203ENST00000554514 CEMIPQ8WUJ3 1361 aa19.07■□□□□ 0.64
ARHGEF40-203ENST00000554514 PROSER3Q2NL68 480 aa19.06■□□□□ 0.64
ARHGEF40-203ENST00000554514 PLEKHO1Q53GL0 409 aaPredicted RBP19.06■□□□□ 0.64
ARHGEF40-203ENST00000554514 GPT2Q8TD30 523 aa19.06■□□□□ 0.64
ARHGEF40-203ENST00000554514 AIMP1Q12904 312 aaKnown RBP19.05■□□□□ 0.64
ARHGEF40-203ENST00000554514 AKAP4Q5JQC9 854 aa19.05■□□□□ 0.64
ARHGEF40-203ENST00000554514 CWC27Q6UX04 472 aaKnown RBP19.05■□□□□ 0.64
ARHGEF40-203ENST00000554514 KIF1BPQ96EK5 621 aa19.05■□□□□ 0.64
ARHGEF40-203ENST00000554514 NAP1L5Q96NT1 182 aaPredicted RBP19.05■□□□□ 0.64
ARHGEF40-203ENST00000554514 C9orf78Q9NZ63 289 aaPredicted RBP19.05■□□□□ 0.64
ARHGEF40-203ENST00000554514 NSFL1CQ9UNZ2 370 aaKnown RBP19.05■□□□□ 0.64
ARHGEF40-203ENST00000554514 RAB11FIP3O75154 756 aa19.04■□□□□ 0.64
ARHGEF40-203ENST00000554514 POLA2Q14181 598 aa19.04■□□□□ 0.64
ARHGEF40-203ENST00000554514 PI4K2BQ8TCG2 481 aa19.04■□□□□ 0.64
ARHGEF40-203ENST00000554514 PA2G4Q9UQ80 394 aaKnown RBP19.04■□□□□ 0.64
ARHGEF40-203ENST00000554514 MAP3K2Q9Y2U5 619 aa19.04■□□□□ 0.64
ARHGEF40-203ENST00000554514 ESPNB1AK53 854 aa19.04■□□□□ 0.64
ARHGEF40-203ENST00000554514 GCP02774 474 aa19.04■□□□□ 0.64
ARHGEF40-203ENST00000554514 CWF19L2Q2TBE0 894 aaKnown RBP19.04■□□□□ 0.64
ARHGEF40-203ENST00000554514 KCNH5Q8NCM2 988 aa19.04■□□□□ 0.64
ARHGEF40-203ENST00000554514 SPG7Q9UQ90 795 aa19.04■□□□□ 0.64
ARHGEF40-203ENST00000554514 RGPD2P0DJD1 1756 aa19.04■□□□□ 0.64
ARHGEF40-203ENST00000554514 DTNBO60941 627 aa19.04■□□□□ 0.64
ARHGEF40-203ENST00000554514 ANP32BQ92688 251 aaKnown RBP19.04■□□□□ 0.64
ARHGEF40-203ENST00000554514 PXDNLA1KZ92 1463 aa19.04■□□□□ 0.64
ARHGEF40-203ENST00000554514 ANKRD24Q8TF21 1146 aa19.03■□□□□ 0.64
ARHGEF40-203ENST00000554514 CACNA1FO60840 1977 aa19.03■□□□□ 0.64
ARHGEF40-203ENST00000554514 RNMTO43148 476 aaKnown RBP19.02■□□□□ 0.64
ARHGEF40-203ENST00000554514 ADCY9O60503 1353 aa19.02■□□□□ 0.64
ARHGEF40-203ENST00000554514 MCM2P49736 904 aa19.02■□□□□ 0.64
ARHGEF40-203ENST00000554514 GDPD2Q9HCC8 539 aa19.02■□□□□ 0.64
ARHGEF40-203ENST00000554514 CLCN1P35523 988 aa19.01■□□□□ 0.63
ARHGEF40-203ENST00000554514 PRIM1P49642 420 aaKnown RBP19.01■□□□□ 0.63
ARHGEF40-203ENST00000554514 CNTROBQ8N137 903 aa19.01■□□□□ 0.63
ARHGEF40-203ENST00000554514 PKNOX2Q96KN3 472 aa19.01■□□□□ 0.63
ARHGEF40-203ENST00000554514 ANAPC15P60006 121 aa19.01■□□□□ 0.63
ARHGEF40-203ENST00000554514 PXDNQ92626 1479 aa19.01■□□□□ 0.63
ARHGEF40-203ENST00000554514 NFAT5O94916 1531 aa19.01■□□□□ 0.63
ARHGEF40-203ENST00000554514 CPA1P15085 419 aa19.01■□□□□ 0.63
ARHGEF40-203ENST00000554514 DBF4Q9UBU7 674 aaPredicted RBP19.01■□□□□ 0.63
ARHGEF40-203ENST00000554514 SYCE3A1L190 88 aa19■□□□□ 0.63
ARHGEF40-203ENST00000554514 RBSNQ9H1K0 784 aa19■□□□□ 0.63
ARHGEF40-203ENST00000554514 AXIN2Q9Y2T1 843 aa19■□□□□ 0.63
ARHGEF40-203ENST00000554514 TUBGCP6Q96RT7 1819 aa19■□□□□ 0.63
ARHGEF40-203ENST00000554514 ZC3H6P61129 1189 aaKnown RBP19■□□□□ 0.63
ARHGEF40-203ENST00000554514 KIAA1211Q6ZU35 1233 aa19■□□□□ 0.63
ARHGEF40-203ENST00000554514 TMEM63CQ9P1W3 806 aa19■□□□□ 0.63
ARHGEF40-203ENST00000554514 AOX1Q06278 1338 aa18.99■□□□□ 0.63
ARHGEF40-203ENST00000554514 HSPA4P34932 840 aa18.99■□□□□ 0.63
ARHGEF40-203ENST00000554514 SGSM2O43147 1006 aa18.99■□□□□ 0.63
ARHGEF40-203ENST00000554514 CUL4AQ13619 759 aa18.99■□□□□ 0.63
ARHGEF40-203ENST00000554514 DDX54Q8TDD1 881 aaKnown RBP18.99■□□□□ 0.63
ARHGEF40-203ENST00000554514 BRD1O95696 1058 aa18.98■□□□□ 0.63
ARHGEF40-203ENST00000554514 ZNF445P59923 1031 aa18.98■□□□□ 0.63
ARHGEF40-203ENST00000554514 RASEFQ8IZ41 740 aa18.98■□□□□ 0.63
ARHGEF40-203ENST00000554514 GIGYF1O75420 1035 aaPredicted RBP18.98■□□□□ 0.63
ARHGEF40-203ENST00000554514 HOXB7P09629 217 aa18.98■□□□□ 0.63
ARHGEF40-203ENST00000554514 CCDC173Q0VFZ6 552 aa18.98■□□□□ 0.63
ARHGEF40-203ENST00000554514 SLC39A6Q13433 755 aa18.98■□□□□ 0.63
ARHGEF40-203ENST00000554514 CLASRPQ8N2M8 674 aaKnown RBP18.98■□□□□ 0.63
ARHGEF40-203ENST00000554514 DIAPH3Q9NSV4 1193 aa18.98■□□□□ 0.63
ARHGEF40-203ENST00000554514 AMOTQ4VCS5 1084 aa18.97■□□□□ 0.63
ARHGEF40-203ENST00000554514 ARHGEF25Q86VW2 580 aa18.97■□□□□ 0.63
ARHGEF40-203ENST00000554514 SNX14Q9Y5W7 946 aa18.97■□□□□ 0.63
ARHGEF40-203ENST00000554514 IFIT2P09913 472 aaKnown RBP18.97■□□□□ 0.63
ARHGEF40-203ENST00000554514 SIL1Q9H173 461 aa18.97■□□□□ 0.63
ARHGEF40-203ENST00000554514 RAD50Q92878 1312 aa18.96■□□□□ 0.63
ARHGEF40-203ENST00000554514 MYL6BP14649 208 aa18.96■□□□□ 0.63
ARHGEF40-203ENST00000554514 HSP90AB4PQ58FF6 505 aa18.96■□□□□ 0.63
ARHGEF40-203ENST00000554514 RNF214Q8ND24 703 aa18.96■□□□□ 0.63
ARHGEF40-203ENST00000554514 AACSQ86V21 672 aa18.96■□□□□ 0.63
ARHGEF40-203ENST00000554514 LSG1Q9H089 658 aaKnown RBP18.96■□□□□ 0.63
ARHGEF40-203ENST00000554514 PODXL2Q9NZ53 605 aa18.96■□□□□ 0.63
ARHGEF40-203ENST00000554514 ADGRL3Q9HAR2 1447 aa18.95■□□□□ 0.62
ARHGEF40-203ENST00000554514 KSR2Q6VAB6 950 aa18.95■□□□□ 0.62
ARHGEF40-203ENST00000554514 CHD2O14647 1828 aaKnown RBP18.94■□□□□ 0.62
ARHGEF40-203ENST00000554514 PIP4K2AP48426 406 aaPredicted RBP18.94■□□□□ 0.62
ARHGEF40-203ENST00000554514 AK2P54819 239 aa18.94■□□□□ 0.62
ARHGEF40-203ENST00000554514 GLRX3O76003 335 aaKnown RBP18.94■□□□□ 0.62
ARHGEF40-203ENST00000554514 CASTP20810 708 aaKnown RBP18.94■□□□□ 0.62
ARHGEF40-203ENST00000554514 JARID2Q92833 1246 aaPredicted RBP18.94■□□□□ 0.62
ARHGEF40-203ENST00000554514 INTS4Q96HW7 963 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms