RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 ZBTB1Q9Y2K1 713 aa25.15■■□□□ 1.62
CPSF2-203ENST00000554290 N4BP2Q86UW6 1770 aaPredicted RBP25.15■■□□□ 1.62
CPSF2-203ENST00000554290 KIAA1551Q9HCM1 1747 aa25.15■■□□□ 1.62
CPSF2-203ENST00000554290 POLRMTO00411 1230 aaKnown RBP25.14■■□□□ 1.62
CPSF2-203ENST00000554290 KCNA3P22001 575 aa25.14■■□□□ 1.62
CPSF2-203ENST00000554290 TEX13AQ9BXU3 409 aaPredicted RBP25.14■■□□□ 1.62
CPSF2-203ENST00000554290 COL15A1P39059 1388 aa25.14■■□□□ 1.61
CPSF2-203ENST00000554290 PRKAR2BP31323 418 aa25.13■■□□□ 1.61
CPSF2-203ENST00000554290 ZNF790Q6PG37 636 aa25.13■■□□□ 1.61
CPSF2-203ENST00000554290 CANXP27824 592 aaKnown RBP25.12■■□□□ 1.61
CPSF2-203ENST00000554290 VIRMAQ69YN4 1812 aaKnown RBP25.12■■□□□ 1.61
CPSF2-203ENST00000554290 PPP2R1AP30153 589 aa25.11■■□□□ 1.61
CPSF2-203ENST00000554290 ZNF496Q96IT1 587 aaPredicted RBP25.11■■□□□ 1.61
CPSF2-203ENST00000554290 PHACTR3Q96KR7 559 aa25.11■■□□□ 1.61
CPSF2-203ENST00000554290 RSPH6AQ9H0K4 717 aa25.11■■□□□ 1.61
CPSF2-203ENST00000554290 DALRD3Q5D0E6 543 aaKnown RBP25.1■■□□□ 1.61
CPSF2-203ENST00000554290 A0A087WZG4 1122 aa25.09■■□□□ 1.61
CPSF2-203ENST00000554290 U2AF1L5P0DN76 240 aaPredicted RBP25.09■■□□□ 1.61
CPSF2-203ENST00000554290 U2AF1Q01081 240 aaKnown RBP eCLIP25.09■■□□□ 1.61
CPSF2-203ENST00000554290 NFIXQ14938 502 aa25.09■■□□□ 1.61
CPSF2-203ENST00000554290 HEG1Q9ULI3 1381 aa25.08■■□□□ 1.61
CPSF2-203ENST00000554290 FMNL2Q96PY5 1086 aa25.08■■□□□ 1.61
CPSF2-203ENST00000554290 UBR2Q8IWV8 1755 aa25.08■■□□□ 1.6
CPSF2-203ENST00000554290 CEMIPQ8WUJ3 1361 aa25.07■■□□□ 1.6
CPSF2-203ENST00000554290 CHRNA5P30532 468 aa25.07■■□□□ 1.6
CPSF2-203ENST00000554290 EIF5P55010 431 aaKnown RBP25.07■■□□□ 1.6
CPSF2-203ENST00000554290 BCL2L12Q9HB09 334 aa25.06■■□□□ 1.6
CPSF2-203ENST00000554290 BTBD11A6QL63 1104 aa25.05■■□□□ 1.6
CPSF2-203ENST00000554290 SERPINB2P05120 415 aa25.05■■□□□ 1.6
CPSF2-203ENST00000554290 NPM2Q86SE8 214 aaKnown RBP25.05■■□□□ 1.6
CPSF2-203ENST00000554290 RTF1Q92541 710 aaKnown RBP25.05■■□□□ 1.6
CPSF2-203ENST00000554290 BRCA1P38398 1863 aaKnown RBP25.02■■□□□ 1.6
CPSF2-203ENST00000554290 IL6STP40189 918 aaPredicted RBP25.02■■□□□ 1.6
CPSF2-203ENST00000554290 ZNF330Q9Y3S2 320 aaPredicted RBP25.02■■□□□ 1.6
CPSF2-203ENST00000554290 KIF3CO14782 793 aa25.01■■□□□ 1.59
CPSF2-203ENST00000554290 C9orf131Q5VYM1 1079 aa25.01■■□□□ 1.59
CPSF2-203ENST00000554290 BICDL1Q6ZP65 573 aa25.01■■□□□ 1.59
CPSF2-203ENST00000554290 SIPA1L3O60292 1781 aaPredicted RBP25■■□□□ 1.59
CPSF2-203ENST00000554290 KCNQ3O43525 872 aa24.99■■□□□ 1.59
CPSF2-203ENST00000554290 TBC1D2BQ9UPU7 963 aa24.99■■□□□ 1.59
CPSF2-203ENST00000554290 ARFGEF1Q9Y6D6 1849 aa24.99■■□□□ 1.59
CPSF2-203ENST00000554290 HTATSF1O43719 755 aaKnown RBP24.98■■□□□ 1.59
CPSF2-203ENST00000554290 A1BGP04217 495 aa24.98■■□□□ 1.59
CPSF2-203ENST00000554290 MCM10Q7L590 875 aa24.98■■□□□ 1.59
CPSF2-203ENST00000554290 H0YIN7 160 aa24.97■■□□□ 1.59
CPSF2-203ENST00000554290 NEFMP07197 916 aa24.97■■□□□ 1.59
CPSF2-203ENST00000554290 HSPA6P17066 643 aa24.97■■□□□ 1.59
CPSF2-203ENST00000554290 TBC1D9BQ66K14 1250 aa24.97■■□□□ 1.59
CPSF2-203ENST00000554290 C2CD5Q86YS7 1000 aa24.96■■□□□ 1.59
CPSF2-203ENST00000554290 RNF181Q9P0P0 153 aa24.96■■□□□ 1.59
CPSF2-203ENST00000554290 NRXN2Q9P2S2 1712 aa24.95■■□□□ 1.59
CPSF2-203ENST00000554290 SNRPA1P09661 255 aaKnown RBP24.95■■□□□ 1.58
CPSF2-203ENST00000554290 TTLL6Q8N841 843 aa24.95■■□□□ 1.58
CPSF2-203ENST00000554290 AFDNP55196 1824 aaKnown RBP24.94■■□□□ 1.58
CPSF2-203ENST00000554290 PDZRN3Q9UPQ7 1066 aa24.94■■□□□ 1.58
CPSF2-203ENST00000554290 USP16Q9Y5T5 823 aa24.94■■□□□ 1.58
CPSF2-203ENST00000554290 CARMIL3Q8ND23 1372 aa24.93■■□□□ 1.58
CPSF2-203ENST00000554290 TOMM70O94826 608 aa24.93■■□□□ 1.58
CPSF2-203ENST00000554290 DCTN1Q14203 1278 aa24.93■■□□□ 1.58
CPSF2-203ENST00000554290 SETDB2Q96T68 719 aa24.93■■□□□ 1.58
CPSF2-203ENST00000554290 BRIP1Q9BX63 1249 aa24.93■■□□□ 1.58
CPSF2-203ENST00000554290 CAMTA2O94983 1202 aa24.92■■□□□ 1.58
CPSF2-203ENST00000554290 PDE6BP35913 854 aa24.92■■□□□ 1.58
CPSF2-203ENST00000554290 TAF7Q15545 349 aaPredicted RBP24.92■■□□□ 1.58
CPSF2-203ENST00000554290 DZIP3Q86Y13 1208 aaKnown RBP24.92■■□□□ 1.58
CPSF2-203ENST00000554290 NMRK2Q9NPI5 230 aa24.92■■□□□ 1.58
CPSF2-203ENST00000554290 KDM2BQ8NHM5 1336 aa24.91■■□□□ 1.58
CPSF2-203ENST00000554290 NPHP1O15259 732 aa24.91■■□□□ 1.58
CPSF2-203ENST00000554290 PRR5LQ6MZQ0 368 aa24.9■■□□□ 1.58
CPSF2-203ENST00000554290 C16orf71Q8IYS4 520 aaPredicted RBP24.89■■□□□ 1.58
CPSF2-203ENST00000554290 SCN7AQ01118 1682 aa24.88■■□□□ 1.57
CPSF2-203ENST00000554290 PRAMEF22A3QJZ6 481 aa24.88■■□□□ 1.57
CPSF2-203ENST00000554290 LMNB1P20700 586 aa24.88■■□□□ 1.57
CPSF2-203ENST00000554290 CNBD1Q8NA66 436 aa24.88■■□□□ 1.57
CPSF2-203ENST00000554290 PNNQ9H307 717 aaKnown RBP24.88■■□□□ 1.57
CPSF2-203ENST00000554290 PIP4K2AP48426 406 aaPredicted RBP24.87■■□□□ 1.57
CPSF2-203ENST00000554290 RASSF7Q02833 373 aa24.87■■□□□ 1.57
CPSF2-203ENST00000554290 CLEC4GQ6UXB4 293 aa24.87■■□□□ 1.57
CPSF2-203ENST00000554290 ZNF622Q969S3 477 aaKnown RBP eCLIP24.87■■□□□ 1.57
CPSF2-203ENST00000554290 ZNF652Q9Y2D9 606 aa24.87■■□□□ 1.57
CPSF2-203ENST00000554290 ZC3H4Q9UPT8 1303 aaKnown RBP24.86■■□□□ 1.57
CPSF2-203ENST00000554290 ST5P78524 1137 aa24.86■■□□□ 1.57
CPSF2-203ENST00000554290 PNISRQ8TF01 805 aaKnown RBP24.86■■□□□ 1.57
CPSF2-203ENST00000554290 CCDC24Q8N4L8 307 aa24.85■■□□□ 1.57
CPSF2-203ENST00000554290 DLEC1Q9Y238 1755 aa24.85■■□□□ 1.57
CPSF2-203ENST00000554290 RBM46Q8TBY0 533 aaKnown RBP24.84■■□□□ 1.57
CPSF2-203ENST00000554290 APLP1P51693 650 aa24.83■■□□□ 1.57
CPSF2-203ENST00000554290 PLEKHF1Q96S99 279 aa24.83■■□□□ 1.57
CPSF2-203ENST00000554290 MIS18AQ9NYP9 233 aa24.83■■□□□ 1.57
CPSF2-203ENST00000554290 RGL2O15211 777 aa24.82■■□□□ 1.56
CPSF2-203ENST00000554290 NFE2L2Q16236 605 aa24.82■■□□□ 1.56
CPSF2-203ENST00000554290 NBPF5PQ86XG9 351 aaPredicted RBP24.82■■□□□ 1.56
CPSF2-203ENST00000554290 RRAGCQ9HB90 399 aa24.82■■□□□ 1.56
CPSF2-203ENST00000554290 MAPK8IP3Q9UPT6 1336 aa24.82■■□□□ 1.56
CPSF2-203ENST00000554290 CEP350Q5VT06 3117 aa24.81■■□□□ 1.56
CPSF2-203ENST00000554290 NBPF26B4DH59 902 aa24.81■■□□□ 1.56
CPSF2-203ENST00000554290 NBPF10Q6P3W6 841 aaKnown RBP24.81■■□□□ 1.56
CPSF2-203ENST00000554290 NBPF15Q8N660 670 aa24.81■■□□□ 1.56
CPSF2-203ENST00000554290 CNKSR1Q969H4 720 aa24.81■■□□□ 1.56
CPSF2-203ENST00000554290 NFKBIEO00221 500 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms