RNA–Protein interactions for RNA: ENST00000554172.2

PAX2-208, Transcript of paired box 2, humanhuman

TSL 1 (best)

Gene PAX2, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX2-208ENST00000554172 SNRPA1P09661 255 aaKnown RBP21.41■■□□□ 1.02
PAX2-208ENST00000554172 STK31Q9BXU1 1019 aa21.41■■□□□ 1.02
PAX2-208ENST00000554172 TJP1Q07157 1748 aa21.4■■□□□ 1.02
PAX2-208ENST00000554172 ATF7IPQ6VMQ6 1270 aa21.4■■□□□ 1.02
PAX2-208ENST00000554172 CHPF2Q9P2E5 772 aa21.4■■□□□ 1.02
PAX2-208ENST00000554172 RXRBP28702 533 aa21.39■■□□□ 1.01
PAX2-208ENST00000554172 RBM42Q9BTD8 480 aaKnown RBP21.39■■□□□ 1.01
PAX2-208ENST00000554172 PDE3AQ14432 1141 aa21.38■■□□□ 1.01
PAX2-208ENST00000554172 PROSER3Q2NL68 480 aa21.38■■□□□ 1.01
PAX2-208ENST00000554172 KRT27Q7Z3Y8 459 aa21.38■■□□□ 1.01
PAX2-208ENST00000554172 SLC4A9Q96Q91 983 aa21.38■■□□□ 1.01
PAX2-208ENST00000554172 PHAXQ9H814 394 aaKnown RBP21.38■■□□□ 1.01
PAX2-208ENST00000554172 RBM19Q9Y4C8 960 aaKnown RBP21.38■■□□□ 1.01
PAX2-208ENST00000554172 RGS12O14924 1447 aa21.38■■□□□ 1.01
PAX2-208ENST00000554172 IPO8O15397 1037 aaKnown RBP21.37■■□□□ 1.01
PAX2-208ENST00000554172 B4GALNT3Q6L9W6 998 aa21.37■■□□□ 1.01
PAX2-208ENST00000554172 DZIP1LQ8IYY4 767 aaKnown RBP21.36■■□□□ 1.01
PAX2-208ENST00000554172 COG6Q9Y2V7 657 aa21.36■■□□□ 1.01
PAX2-208ENST00000554172 PIP4K2AP48426 406 aaPredicted RBP21.36■■□□□ 1.01
PAX2-208ENST00000554172 PDIA6Q15084 440 aa21.35■■□□□ 1.01
PAX2-208ENST00000554172 ARHGAP45Q92619 1136 aa21.35■■□□□ 1.01
PAX2-208ENST00000554172 FLIIQ13045 1269 aa21.34■■□□□ 1.01
PAX2-208ENST00000554172 DNAJC10Q8IXB1 793 aa21.34■■□□□ 1.01
PAX2-208ENST00000554172 FTSJ3Q8IY81 847 aaKnown RBP21.34■■□□□ 1.01
PAX2-208ENST00000554172 DBF4Q9UBU7 674 aaPredicted RBP21.34■■□□□ 1.01
PAX2-208ENST00000554172 PALLDQ8WX93 1383 aa21.33■■□□□ 1.01
PAX2-208ENST00000554172 EP400Q96L91 3159 aa21.33■■□□□ 1.01
PAX2-208ENST00000554172 TMEM57Q8N5G2 664 aa21.33■■□□□ 1
PAX2-208ENST00000554172 PTPRCP08575 1304 aa21.32■■□□□ 1
PAX2-208ENST00000554172 MYL6BP14649 208 aa21.32■■□□□ 1
PAX2-208ENST00000554172 VSIG10Q8N0Z9 540 aa21.32■■□□□ 1
PAX2-208ENST00000554172 CHMP4AQ9BY43 222 aa21.32■■□□□ 1
PAX2-208ENST00000554172 API5Q9BZZ5 524 aaKnown RBP21.32■■□□□ 1
PAX2-208ENST00000554172 DDX21Q9NR30 783 aaKnown RBP eCLIP21.32■■□□□ 1
PAX2-208ENST00000554172 ABCC4O15439 1325 aa21.32■■□□□ 1
PAX2-208ENST00000554172 LY75O60449 1722 aa21.32■■□□□ 1
PAX2-208ENST00000554172 CICQ96RK0 1608 aaPredicted RBP21.32■■□□□ 1
PAX2-208ENST00000554172 N4BP2Q86UW6 1770 aaPredicted RBP21.31■■□□□ 1
PAX2-208ENST00000554172 COL5A3P25940 1745 aaPredicted RBP21.31■■□□□ 1
PAX2-208ENST00000554172 F6X3S4 739 aa21.31■■□□□ 1
PAX2-208ENST00000554172 A1BGP04217 495 aa21.31■■□□□ 1
PAX2-208ENST00000554172 FKBP5Q13451 457 aaPredicted RBP21.31■■□□□ 1
PAX2-208ENST00000554172 CCDC136Q96JN2 1154 aa21.31■■□□□ 1
PAX2-208ENST00000554172 MS4A1P11836 297 aa21.3■■□□□ 1
PAX2-208ENST00000554172 ZNF831Q5JPB2 1677 aa21.29■■□□□ 1
PAX2-208ENST00000554172 NBPF26B4DH59 902 aa21.29■■□□□ 1
PAX2-208ENST00000554172 MVPQ14764 893 aaKnown RBP21.29■■□□□ 1
PAX2-208ENST00000554172 NBPF14Q5TI25 921 aa21.29■■□□□ 1
PAX2-208ENST00000554172 NBPF10Q6P3W6 841 aaKnown RBP21.29■■□□□ 1
PAX2-208ENST00000554172 FAM196AQ6ZSG2 479 aa21.29■■□□□ 1
PAX2-208ENST00000554172 LRP10Q7Z4F1 713 aa21.29■■□□□ 1
PAX2-208ENST00000554172 NBPF15Q8N660 670 aa21.29■■□□□ 1
PAX2-208ENST00000554172 SMARCC1Q92922 1105 aaPredicted RBP21.29■■□□□ 1
PAX2-208ENST00000554172 MYH14Q7Z406 1995 aaKnown RBP21.29■■□□□ 1
PAX2-208ENST00000554172 LOC102724428A0A0B4J2F2 783 aa21.28■■□□□ 1
PAX2-208ENST00000554172 SIK1P57059 783 aa21.28■■□□□ 1
PAX2-208ENST00000554172 HYPKQ9NX55 129 aa21.28■■□□□ 1
PAX2-208ENST00000554172 ITPRIPQ8IWB1 547 aa21.28■■□□□ 1
PAX2-208ENST00000554172 TAF1LQ8IZX4 1826 aa21.27■■□□□ 1
PAX2-208ENST00000554172 ATP6V1AP38606 617 aa21.27■■□□□ 1
PAX2-208ENST00000554172 AIMP1Q12904 312 aaKnown RBP21.27■■□□□ 1
PAX2-208ENST00000554172 TEX13AQ9BXU3 409 aaPredicted RBP21.27■■□□□ 1
PAX2-208ENST00000554172 ARFGEF2Q9Y6D5 1785 aa21.26■□□□□ 0.99
PAX2-208ENST00000554172 TRIM37O94972 964 aa21.26■□□□□ 0.99
PAX2-208ENST00000554172 CYP19A1P11511 503 aaPredicted RBP21.26■□□□□ 0.99
PAX2-208ENST00000554172 ITPK1Q13572 414 aa21.26■□□□□ 0.99
PAX2-208ENST00000554172 KCNQ4P56696 695 aa21.25■□□□□ 0.99
PAX2-208ENST00000554172 SLC4A10Q6U841 1118 aa21.25■□□□□ 0.99
PAX2-208ENST00000554172 XAGE3Q8WTP9 111 aa21.25■□□□□ 0.99
PAX2-208ENST00000554172 BCL11BQ9C0K0 894 aaPredicted RBP21.25■□□□□ 0.99
PAX2-208ENST00000554172 ERBB4Q15303 1308 aa21.25■□□□□ 0.99
PAX2-208ENST00000554172 ADCY9O60503 1353 aa21.25■□□□□ 0.99
PAX2-208ENST00000554172 RREB1Q92766 1687 aa21.25■□□□□ 0.99
PAX2-208ENST00000554172 COPS6Q7L5N1 327 aa21.25■□□□□ 0.99
PAX2-208ENST00000554172 NUP188Q5SRE5 1749 aa21.24■□□□□ 0.99
PAX2-208ENST00000554172 PI4KAP2A4QPH2 592 aa21.23■□□□□ 0.99
PAX2-208ENST00000554172 STARD3NLO95772 234 aa21.23■□□□□ 0.99
PAX2-208ENST00000554172 PI4KAP1Q8N8J0 262 aa21.23■□□□□ 0.99
PAX2-208ENST00000554172 INTS3Q68E01 1043 aaKnown RBP21.23■□□□□ 0.99
PAX2-208ENST00000554172 ZBTB1Q9Y2K1 713 aa21.23■□□□□ 0.99
PAX2-208ENST00000554172 DDX19BQ9UMR2 479 aa21.22■□□□□ 0.99
PAX2-208ENST00000554172 TNS1Q9HBL0 1735 aaKnown RBP21.22■□□□□ 0.99
PAX2-208ENST00000554172 AFDNP55196 1824 aaKnown RBP21.21■□□□□ 0.99
PAX2-208ENST00000554172 PXDNLA1KZ92 1463 aa21.21■□□□□ 0.99
PAX2-208ENST00000554172 TTLL7Q6ZT98 887 aa21.2■□□□□ 0.99
PAX2-208ENST00000554172 DNAAF4Q8WXU2 420 aa21.2■□□□□ 0.99
PAX2-208ENST00000554172 MAP3K2Q9Y2U5 619 aa21.2■□□□□ 0.99
PAX2-208ENST00000554172 ZNF330Q9Y3S2 320 aaPredicted RBP21.2■□□□□ 0.99
PAX2-208ENST00000554172 CRKLP46109 303 aaKnown RBP21.2■□□□□ 0.98
PAX2-208ENST00000554172 KSR2Q6VAB6 950 aa21.2■□□□□ 0.98
PAX2-208ENST00000554172 LINC00116Q8NCU8 138 aa21.2■□□□□ 0.98
PAX2-208ENST00000554172 INTS5Q6P9B9 1019 aaKnown RBP21.19■□□□□ 0.98
PAX2-208ENST00000554172 ZBTB7BO15156 539 aaPredicted RBP21.18■□□□□ 0.98
PAX2-208ENST00000554172 DDX58O95786 925 aaKnown RBP21.18■□□□□ 0.98
PAX2-208ENST00000554172 RIC3Q7Z5B4 369 aa21.18■□□□□ 0.98
PAX2-208ENST00000554172 CCDC87Q9NVE4 849 aa21.18■□□□□ 0.98
PAX2-208ENST00000554172 CCNL1Q9UK58 526 aaPredicted RBP21.18■□□□□ 0.98
PAX2-208ENST00000554172 CCT4P50991 539 aaKnown RBP21.17■□□□□ 0.98
PAX2-208ENST00000554172 ANKRD13DQ6ZTN6 518 aa21.17■□□□□ 0.98
PAX2-208ENST00000554172 NUP98P52948 1817 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms