RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 KDM6AO15550 1401 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-212ENST00000554158 SPDYE4A6NLX3 237 aa11.09□□□□□ -0.63
ACTN1-212ENST00000554158 EIF4G2P78344 907 aaKnown RBP eCLIP11.09□□□□□ -0.63
ACTN1-212ENST00000554158 SMC1BQ8NDV3 1235 aa11.09□□□□□ -0.63
ACTN1-212ENST00000554158 PANK3Q9H999 370 aa11.09□□□□□ -0.63
ACTN1-212ENST00000554158 RRAGCQ9HB90 399 aa11.09□□□□□ -0.63
ACTN1-212ENST00000554158 TIAM2Q8IVF5 1701 aa11.09□□□□□ -0.63
ACTN1-212ENST00000554158 CACNA1SQ13698 1873 aa11.08□□□□□ -0.64
ACTN1-212ENST00000554158 CHRNA5P30532 468 aa11.08□□□□□ -0.64
ACTN1-212ENST00000554158 NPM2Q86SE8 214 aaKnown RBP11.08□□□□□ -0.64
ACTN1-212ENST00000554158 KLRG1Q96E93 195 aa11.08□□□□□ -0.64
ACTN1-212ENST00000554158 KNSTRNQ9Y448 316 aa11.08□□□□□ -0.64
ACTN1-212ENST00000554158 ZC3H4Q9UPT8 1303 aaKnown RBP11.08□□□□□ -0.64
ACTN1-212ENST00000554158 DICER1Q9UPY3 1922 aaKnown RBP11.07□□□□□ -0.64
ACTN1-212ENST00000554158 AKAP4Q5JQC9 854 aa11.07□□□□□ -0.64
ACTN1-212ENST00000554158 USPL1Q5W0Q7 1092 aa11.07□□□□□ -0.64
ACTN1-212ENST00000554158 DNAJC5GQ8N7S2 189 aa11.07□□□□□ -0.64
ACTN1-212ENST00000554158 POLRMTO00411 1230 aaKnown RBP11.06□□□□□ -0.64
ACTN1-212ENST00000554158 NPHP1O15259 732 aa11.06□□□□□ -0.64
ACTN1-212ENST00000554158 KCNA3P22001 575 aa11.06□□□□□ -0.64
ACTN1-212ENST00000554158 DDR1Q08345 913 aa11.06□□□□□ -0.64
ACTN1-212ENST00000554158 AEBP1Q8IUX7 1158 aa11.06□□□□□ -0.64
ACTN1-212ENST00000554158 COL15A1P39059 1388 aa11.05□□□□□ -0.64
ACTN1-212ENST00000554158 H0YIN7 160 aa11.05□□□□□ -0.64
ACTN1-212ENST00000554158 CAPN15O75808 1086 aa11.05□□□□□ -0.64
ACTN1-212ENST00000554158 VEGFAP15692 232 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-212ENST00000554158 LMNB1P20700 586 aa11.05□□□□□ -0.64
ACTN1-212ENST00000554158 DNAJC10Q8IXB1 793 aa11.05□□□□□ -0.64
ACTN1-212ENST00000554158 TTC5Q8N0Z6 440 aa11.05□□□□□ -0.64
ACTN1-212ENST00000554158 TTLL6Q8N841 843 aa11.05□□□□□ -0.64
ACTN1-212ENST00000554158 PCGF6Q9BYE7 350 aa11.05□□□□□ -0.64
ACTN1-212ENST00000554158 SLC52A2Q9HAB3 445 aa11.05□□□□□ -0.64
ACTN1-212ENST00000554158 TM4SF1P30408 202 aa11.04□□□□□ -0.64
ACTN1-212ENST00000554158 HTRA3P83110 453 aa11.04□□□□□ -0.64
ACTN1-212ENST00000554158 DPY19L2Q6NUT2 758 aa11.04□□□□□ -0.64
ACTN1-212ENST00000554158 INTS5Q6P9B9 1019 aaKnown RBP11.04□□□□□ -0.64
ACTN1-212ENST00000554158 C2CD5Q86YS7 1000 aa11.04□□□□□ -0.64
ACTN1-212ENST00000554158 TNS4Q8IZW8 715 aa11.04□□□□□ -0.64
ACTN1-212ENST00000554158 NARFQ9UHQ1 456 aa11.04□□□□□ -0.64
ACTN1-212ENST00000554158 SOS1Q07889 1333 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-212ENST00000554158 CLSPNQ9HAW4 1339 aa11.04□□□□□ -0.64
ACTN1-212ENST00000554158 NRXN2Q9P2S2 1712 aa11.04□□□□□ -0.64
ACTN1-212ENST00000554158 A0A087WZG4 1122 aa11.03□□□□□ -0.64
ACTN1-212ENST00000554158 STARD3NLO95772 234 aa11.03□□□□□ -0.64
ACTN1-212ENST00000554158 SERPINB2P05120 415 aa11.03□□□□□ -0.64
ACTN1-212ENST00000554158 RASSF7Q02833 373 aa11.03□□□□□ -0.64
ACTN1-212ENST00000554158 ADAMTS7Q9UKP4 1686 aa11.03□□□□□ -0.64
ACTN1-212ENST00000554158 GLTPD2A6NH11 291 aa11.02□□□□□ -0.65
ACTN1-212ENST00000554158 HSPA5P11021 654 aaKnown RBP11.02□□□□□ -0.65
ACTN1-212ENST00000554158 CANXP27824 592 aaKnown RBP11.02□□□□□ -0.65
ACTN1-212ENST00000554158 SLC39A6Q13433 755 aa11.02□□□□□ -0.65
ACTN1-212ENST00000554158 NFIXQ14938 502 aa11.02□□□□□ -0.65
ACTN1-212ENST00000554158 BICDL1Q6ZP65 573 aa11.02□□□□□ -0.65
ACTN1-212ENST00000554158 JMYQ8N9B5 988 aa11.02□□□□□ -0.65
ACTN1-212ENST00000554158 ZNF622Q969S3 477 aaKnown RBP eCLIP11.02□□□□□ -0.65
ACTN1-212ENST00000554158 PDZRN3Q9UPQ7 1066 aa11.02□□□□□ -0.65
ACTN1-212ENST00000554158 ZNF330Q9Y3S2 320 aaPredicted RBP11.02□□□□□ -0.65
ACTN1-212ENST00000554158 UBR2Q8IWV8 1755 aa11.02□□□□□ -0.65
ACTN1-212ENST00000554158 RNMTO43148 476 aaKnown RBP11.01□□□□□ -0.65
ACTN1-212ENST00000554158 HMOX1P09601 288 aa11.01□□□□□ -0.65
ACTN1-212ENST00000554158 CYP19A1P11511 503 aaPredicted RBP11.01□□□□□ -0.65
ACTN1-212ENST00000554158 IL13P35225 146 aa11.01□□□□□ -0.65
ACTN1-212ENST00000554158 TEFQ10587 303 aa11.01□□□□□ -0.65
ACTN1-212ENST00000554158 VSIG10Q8N0Z9 540 aa11.01□□□□□ -0.65
ACTN1-212ENST00000554158 FER1L6Q2WGJ9 1857 aa11.01□□□□□ -0.65
ACTN1-212ENST00000554158 MRC1P22897 1456 aa11□□□□□ -0.65
ACTN1-212ENST00000554158 ANKRD31Q8N7Z5 1873 aa11□□□□□ -0.65
ACTN1-212ENST00000554158 PDE6BP35913 854 aa11□□□□□ -0.65
ACTN1-212ENST00000554158 COL13A1Q5TAT6 717 aaPredicted RBP11□□□□□ -0.65
ACTN1-212ENST00000554158 LGR6Q9HBX8 967 aa11□□□□□ -0.65
ACTN1-212ENST00000554158 ZBTB1Q9Y2K1 713 aa11□□□□□ -0.65
ACTN1-212ENST00000554158 DIAPH1O60610 1272 aaKnown RBP10.99□□□□□ -0.65
ACTN1-212ENST00000554158 ERFEQ4G0M1 354 aa10.99□□□□□ -0.65
ACTN1-212ENST00000554158 TEX13AQ9BXU3 409 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-212ENST00000554158 SCN7AQ01118 1682 aa10.98□□□□□ -0.65
ACTN1-212ENST00000554158 ARFGEF2Q9Y6D5 1785 aa10.98□□□□□ -0.65
ACTN1-212ENST00000554158 VASPP50552 380 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-212ENST00000554158 ST5P78524 1137 aa10.98□□□□□ -0.65
ACTN1-212ENST00000554158 SOGA3Q5TF21 947 aa10.98□□□□□ -0.65
ACTN1-212ENST00000554158 HSPA1AP0DMV8 641 aaKnown RBP10.97□□□□□ -0.65
ACTN1-212ENST00000554158 HSPA1BP0DMV9 641 aaKnown RBP10.97□□□□□ -0.65
ACTN1-212ENST00000554158 MTHFSDQ2M296 383 aaKnown RBP10.97□□□□□ -0.65
ACTN1-212ENST00000554158 CNKSR1Q969H4 720 aa10.97□□□□□ -0.65
ACTN1-212ENST00000554158 SETDB2Q96T68 719 aa10.97□□□□□ -0.65
ACTN1-212ENST00000554158 BRIP1Q9BX63 1249 aa10.97□□□□□ -0.65
ACTN1-212ENST00000554158 CARMIL3Q8ND23 1372 aa10.97□□□□□ -0.65
ACTN1-212ENST00000554158 COL11A2P13942 1736 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-212ENST00000554158 SCN4AP35499 1836 aa10.97□□□□□ -0.65
ACTN1-212ENST00000554158 SIPA1L3O60292 1781 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-212ENST00000554158 U2SURPO15042 1029 aaKnown RBP10.96□□□□□ -0.65
ACTN1-212ENST00000554158 C21orf2O43822 256 aa10.96□□□□□ -0.65
ACTN1-212ENST00000554158 PRELPP51888 382 aa10.96□□□□□ -0.65
ACTN1-212ENST00000554158 CNBD1Q8NA66 436 aa10.96□□□□□ -0.65
ACTN1-212ENST00000554158 GAS2L2Q8NHY3 880 aa10.96□□□□□ -0.65
ACTN1-212ENST00000554158 TAOK3Q9H2K8 898 aa10.96□□□□□ -0.65
ACTN1-212ENST00000554158 SLX4Q8IY92 1834 aa10.95□□□□□ -0.66
ACTN1-212ENST00000554158 IQCA1LA6NCM1 817 aa10.95□□□□□ -0.66
ACTN1-212ENST00000554158 GNAT3A8MTJ3 354 aa10.95□□□□□ -0.66
ACTN1-212ENST00000554158 NFKBIEO00221 500 aa10.95□□□□□ -0.66
ACTN1-212ENST00000554158 EIF5P55010 431 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms