RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 SAFB2Q14151 953 aaKnown RBP eCLIP10.29□□□□□ -0.76
ATXN3-224ENST00000554040 VSIG10Q8N0Z9 540 aa10.29□□□□□ -0.76
ATXN3-224ENST00000554040 RDH13Q8NBN7 331 aa10.29□□□□□ -0.76
ATXN3-224ENST00000554040 THAP11Q96EK4 314 aa10.29□□□□□ -0.76
ATXN3-224ENST00000554040 SLC6A16Q9GZN6 736 aa10.29□□□□□ -0.76
ATXN3-224ENST00000554040 C14orf93Q9H972 538 aaKnown RBP10.29□□□□□ -0.76
ATXN3-224ENST00000554040 FMN2Q9NZ56 1722 aa10.29□□□□□ -0.76
ATXN3-224ENST00000554040 TNS1Q9HBL0 1735 aaKnown RBP10.28□□□□□ -0.76
ATXN3-224ENST00000554040 ADGRB2O60241 1585 aa10.28□□□□□ -0.76
ATXN3-224ENST00000554040 GCGRP47871 477 aa10.28□□□□□ -0.76
ATXN3-224ENST00000554040 CHRNA2Q15822 529 aa10.28□□□□□ -0.76
ATXN3-224ENST00000554040 PRAM1Q96QH2 718 aa10.28□□□□□ -0.76
ATXN3-224ENST00000554040 USP35Q9P2H5 1018 aa10.28□□□□□ -0.76
ATXN3-224ENST00000554040 ACIN1Q9UKV3 1341 aaKnown RBP10.28□□□□□ -0.76
ATXN3-224ENST00000554040 THSD7AQ9UPZ6 1657 aa10.28□□□□□ -0.76
ATXN3-224ENST00000554040 NRAPQ86VF7 1730 aa10.27□□□□□ -0.76
ATXN3-224ENST00000554040 EVA1CP58658 441 aa10.27□□□□□ -0.77
ATXN3-224ENST00000554040 SPSB2Q99619 263 aa10.27□□□□□ -0.77
ATXN3-224ENST00000554040 DHX57Q6P158 1386 aaKnown RBP10.26□□□□□ -0.77
ATXN3-224ENST00000554040 KIAA0232Q92628 1395 aa10.26□□□□□ -0.77
ATXN3-224ENST00000554040 COL14A1Q05707 1796 aaKnown RBP10.26□□□□□ -0.77
ATXN3-224ENST00000554040 ANKARQ7Z5J8 1434 aa10.26□□□□□ -0.77
ATXN3-224ENST00000554040 C11orf95C9JLR9 678 aaPredicted RBP10.26□□□□□ -0.77
ATXN3-224ENST00000554040 PLSCR1O15162 318 aa10.26□□□□□ -0.77
ATXN3-224ENST00000554040 ZNF598Q86UK7 904 aaKnown RBP10.26□□□□□ -0.77
ATXN3-224ENST00000554040 TCP11L2Q8N4U5 519 aa10.26□□□□□ -0.77
ATXN3-224ENST00000554040 POGKQ9P215 609 aa10.26□□□□□ -0.77
ATXN3-224ENST00000554040 PPLO60437 1756 aa10.26□□□□□ -0.77
ATXN3-224ENST00000554040 PIK3C2GO75747 1445 aa10.25□□□□□ -0.77
ATXN3-224ENST00000554040 CEP350Q5VT06 3117 aa10.25□□□□□ -0.77
ATXN3-224ENST00000554040 ZBTB7AO95365 584 aa10.25□□□□□ -0.77
ATXN3-224ENST00000554040 ZC3H6P61129 1189 aaKnown RBP10.25□□□□□ -0.77
ATXN3-224ENST00000554040 MAP2K5Q13163 448 aa10.25□□□□□ -0.77
ATXN3-224ENST00000554040 CFAP70Q5T0N1 1121 aa10.25□□□□□ -0.77
ATXN3-224ENST00000554040 NGDNQ8NEJ9 315 aaKnown RBP10.25□□□□□ -0.77
ATXN3-224ENST00000554040 SYT17Q9BSW7 474 aa10.25□□□□□ -0.77
ATXN3-224ENST00000554040 SLC27A5Q9Y2P5 690 aa10.25□□□□□ -0.77
ATXN3-224ENST00000554040 SPATA31E1Q6ZUB1 1445 aa10.24□□□□□ -0.77
ATXN3-224ENST00000554040 ATP6V1AP38606 617 aa10.24□□□□□ -0.77
ATXN3-224ENST00000554040 LARP1Q6PKG0 1096 aaKnown RBP10.24□□□□□ -0.77
ATXN3-224ENST00000554040 PDGFDQ9GZP0 370 aaPredicted RBP10.24□□□□□ -0.77
ATXN3-224ENST00000554040 THRAP3Q9Y2W1 955 aaKnown RBP10.24□□□□□ -0.77
ATXN3-224ENST00000554040 ABCA3Q99758 1704 aa10.24□□□□□ -0.77
ATXN3-224ENST00000554040 PRR20EP86478 221 aa10.23□□□□□ -0.77
ATXN3-224ENST00000554040 PRR20CP86479 221 aa10.23□□□□□ -0.77
ATXN3-224ENST00000554040 PRR20DP86480 221 aa10.23□□□□□ -0.77
ATXN3-224ENST00000554040 PRR20BP86481 221 aa10.23□□□□□ -0.77
ATXN3-224ENST00000554040 PRR20AP86496 221 aa10.23□□□□□ -0.77
ATXN3-224ENST00000554040 SULF1Q8IWU6 871 aa10.23□□□□□ -0.77
ATXN3-224ENST00000554040 FAM160A2Q8N612 972 aaPredicted RBP10.23□□□□□ -0.77
ATXN3-224ENST00000554040 HIRIP3Q9BW71 556 aaPredicted RBP10.23□□□□□ -0.77
ATXN3-224ENST00000554040 PRR36Q9H6K5 1346 aa10.23□□□□□ -0.77
ATXN3-224ENST00000554040 KNDC1Q76NI1 1749 aa10.22□□□□□ -0.77
ATXN3-224ENST00000554040 RGPD8O14715 1765 aaPredicted RBP10.22□□□□□ -0.77
ATXN3-224ENST00000554040 IRF6O14896 467 aa10.22□□□□□ -0.77
ATXN3-224ENST00000554040 GDF9O60383 454 aa10.22□□□□□ -0.77
ATXN3-224ENST00000554040 FHDC1Q9C0D6 1143 aaPredicted RBP10.22□□□□□ -0.77
ATXN3-224ENST00000554040 SSH2Q76I76 1423 aa10.22□□□□□ -0.77
ATXN3-224ENST00000554040 RREB1Q92766 1687 aa10.22□□□□□ -0.77
ATXN3-224ENST00000554040 WASLO00401 505 aaPredicted RBP10.21□□□□□ -0.77
ATXN3-224ENST00000554040 ZNF697Q5TEC3 545 aa10.21□□□□□ -0.77
ATXN3-224ENST00000554040 NUP188Q5SRE5 1749 aa10.21□□□□□ -0.78
ATXN3-224ENST00000554040 GIGYF1O75420 1035 aaPredicted RBP10.2□□□□□ -0.78
ATXN3-224ENST00000554040 CD46P15529 392 aa10.2□□□□□ -0.78
ATXN3-224ENST00000554040 EIF3AQ14152 1382 aaKnown RBP10.2□□□□□ -0.78
ATXN3-224ENST00000554040 NUTM2GQ5VZR2 741 aa10.2□□□□□ -0.78
ATXN3-224ENST00000554040 BRICD5Q6PL45 260 aa10.2□□□□□ -0.78
ATXN3-224ENST00000554040 PPARGC1BQ86YN6 1023 aaKnown RBP10.2□□□□□ -0.78
ATXN3-224ENST00000554040 MINK1Q8N4C8 1332 aaPredicted RBP10.2□□□□□ -0.78
ATXN3-224ENST00000554040 PRDM9Q9NQV7 894 aa10.2□□□□□ -0.78
ATXN3-224ENST00000554040 SALL2Q9Y467 1007 aaPredicted RBP10.2□□□□□ -0.78
ATXN3-224ENST00000554040 CAMTA1Q9Y6Y1 1673 aa10.2□□□□□ -0.78
ATXN3-224ENST00000554040 TRPM3Q9HCF6 1732 aaPredicted RBP10.19□□□□□ -0.78
ATXN3-224ENST00000554040 RNF19BQ6ZMZ0 732 aa10.19□□□□□ -0.78
ATXN3-224ENST00000554040 PTF1AQ7RTS3 328 aa10.19□□□□□ -0.78
ATXN3-224ENST00000554040 TRAK1Q9UPV9 953 aa10.19□□□□□ -0.78
ATXN3-224ENST00000554040 ALS2Q96Q42 1657 aa10.18□□□□□ -0.78
ATXN3-224ENST00000554040 SLC15A2Q16348 729 aa10.18□□□□□ -0.78
ATXN3-224ENST00000554040 MPHOSPH9Q99550 1183 aa10.18□□□□□ -0.78
ATXN3-224ENST00000554040 MTFR1LQ9H019 292 aa10.18□□□□□ -0.78
ATXN3-224ENST00000554040 STK32BQ9NY57 414 aa10.18□□□□□ -0.78
ATXN3-224ENST00000554040 IFT172Q9UG01 1749 aa10.18□□□□□ -0.78
ATXN3-224ENST00000554040 FMNL1O95466 1100 aaPredicted RBP10.17□□□□□ -0.78
ATXN3-224ENST00000554040 NUDT16Q96DE0 195 aaKnown RBP10.17□□□□□ -0.78
ATXN3-224ENST00000554040 PKD2L1Q9P0L9 805 aa10.17□□□□□ -0.78
ATXN3-224ENST00000554040 FCF1Q9Y324 198 aaKnown RBP10.17□□□□□ -0.78
ATXN3-224ENST00000554040 NRKQ7Z2Y5 1582 aa10.17□□□□□ -0.78
ATXN3-224ENST00000554040 GOLGB1Q14789 3259 aaKnown RBP10.17□□□□□ -0.78
ATXN3-224ENST00000554040 OVOS2A0A0G2JMS6 1433 aa10.16□□□□□ -0.78
ATXN3-224ENST00000554040 OVOS2A0A0J9YW53 1432 aa10.16□□□□□ -0.78
ATXN3-224ENST00000554040 OVOS2Q6IE36 1432 aa10.16□□□□□ -0.78
ATXN3-224ENST00000554040 CPDO75976 1380 aa10.16□□□□□ -0.78
ATXN3-224ENST00000554040 TNFRSF10AO00220 468 aa10.16□□□□□ -0.78
ATXN3-224ENST00000554040 DDB1Q16531 1140 aa10.16□□□□□ -0.78
ATXN3-224ENST00000554040 GPR162Q16538 588 aa10.16□□□□□ -0.78
ATXN3-224ENST00000554040 CCDC102AQ96A19 550 aa10.16□□□□□ -0.78
ATXN3-224ENST00000554040 ARXQ96QS3 562 aa10.16□□□□□ -0.78
ATXN3-224ENST00000554040 DLC1Q96QB1 1528 aa10.16□□□□□ -0.78
ATXN3-224ENST00000554040 GCP02774 474 aa10.15□□□□□ -0.78
ATXN3-224ENST00000554040 MDM2Q00987 491 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms