RNA–Protein interactions for RNA: ENST00000553927.1

RPGRIP1-204, Transcript of RPGR interacting protein 1, humanhuman

TSL 2

Gene RPGRIP1, Length 2,875 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-204ENST00000553927 ARHGEF40Q8TER5 1519 aa8.09□□□□□ -1.11
RPGRIP1-204ENST00000553927 GJB2P29033 226 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 ZNF75DP51815 510 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 GYS2P54840 703 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 BRPF1P55201 1214 aaPredicted RBP8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 NUP62CLQ9H1M0 184 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 MIS18AQ9NYP9 233 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 FEZ2Q9UHY8 353 aaPredicted RBP8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 RGS12O14924 1447 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 EVC2Q86UK5 1308 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 TRIM66O15016 1216 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 TPM3P06753 285 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 GNAI1P63096 354 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 NFE2L2Q16236 605 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 MAP3K11Q16584 847 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 SAMD1Q6SPF0 538 aaPredicted RBP8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 RUFY3Q7L099 469 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 DACT1Q9NYF0 836 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 USP16Q9Y5T5 823 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 RTL1A6NKG5 1358 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 PTPN14Q15678 1187 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 NUTM1Q86Y26 1132 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 C10orf67Q8IYJ2 551 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 RASEFQ8IZ41 740 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 TMEM87AQ8NBN3 555 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 TNMDQ9H2S6 317 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 RSPH14Q9UHP6 348 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 SPG7Q9UQ90 795 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 PAXBP1Q9Y5B6 917 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 EMILIN1Q9Y6C2 1016 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 LRRC7Q96NW7 1537 aa8.08□□□□□ -1.12
RPGRIP1-204ENST00000553927 ERBB3P21860 1342 aa8.07□□□□□ -1.12
RPGRIP1-204ENST00000553927 RAD50Q92878 1312 aa8.07□□□□□ -1.12
RPGRIP1-204ENST00000553927 TULP2O00295 520 aa8.07□□□□□ -1.12
RPGRIP1-204ENST00000553927 TTC6Q86TZ1 520 aa8.07□□□□□ -1.12
RPGRIP1-204ENST00000553927 ZCCHC17Q9NP64 241 aaKnown RBP8.07□□□□□ -1.12
RPGRIP1-204ENST00000553927 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.07□□□□□ -1.12
RPGRIP1-204ENST00000553927 MAP3K4Q9Y6R4 1608 aa8.07□□□□□ -1.12
RPGRIP1-204ENST00000553927 ST5P78524 1137 aa8.07□□□□□ -1.12
RPGRIP1-204ENST00000553927 RPAP2Q8IXW5 612 aaPredicted RBP8.07□□□□□ -1.12
RPGRIP1-204ENST00000553927 ERCC4Q92889 916 aaPredicted RBP8.07□□□□□ -1.12
RPGRIP1-204ENST00000553927 TCEANC2Q96MN5 208 aa8.07□□□□□ -1.12
RPGRIP1-204ENST00000553927 LCMT1Q9UIC8 334 aa8.07□□□□□ -1.12
RPGRIP1-204ENST00000553927 COL3A1P02461 1466 aaPredicted RBP8.07□□□□□ -1.12
RPGRIP1-204ENST00000553927 SEC31AO94979 1220 aaKnown RBP8.06□□□□□ -1.12
RPGRIP1-204ENST00000553927 SKILP12757 684 aa8.06□□□□□ -1.12
RPGRIP1-204ENST00000553927 CASTP20810 708 aaKnown RBP8.06□□□□□ -1.12
RPGRIP1-204ENST00000553927 CEBPZQ03701 1054 aaKnown RBP8.06□□□□□ -1.12
RPGRIP1-204ENST00000553927 EPC1Q9H2F5 836 aa8.06□□□□□ -1.12
RPGRIP1-204ENST00000553927 GOLGA6L4A6NEF3 574 aa8.06□□□□□ -1.12
RPGRIP1-204ENST00000553927 FCHSD2O94868 740 aa8.06□□□□□ -1.12
RPGRIP1-204ENST00000553927 CYP2C19P33261 490 aa8.06□□□□□ -1.12
RPGRIP1-204ENST00000553927 ZNF165P49910 485 aa8.06□□□□□ -1.12
RPGRIP1-204ENST00000553927 FOSBP53539 338 aa8.06□□□□□ -1.12
RPGRIP1-204ENST00000553927 COL9A3Q14050 684 aaPredicted RBP8.06□□□□□ -1.12
RPGRIP1-204ENST00000553927 SYT10Q6XYQ8 523 aa8.06□□□□□ -1.12
RPGRIP1-204ENST00000553927 KRBA2Q6ZNG9 492 aa8.06□□□□□ -1.12
RPGRIP1-204ENST00000553927 CDC37L1Q7L3B6 337 aa8.06□□□□□ -1.12
RPGRIP1-204ENST00000553927 MCM10Q7L590 875 aa8.06□□□□□ -1.12
RPGRIP1-204ENST00000553927 G2E3Q7L622 706 aa8.06□□□□□ -1.12
RPGRIP1-204ENST00000553927 MTMR6Q9Y217 621 aa8.06□□□□□ -1.12
RPGRIP1-204ENST00000553927 QRICH2Q9H0J4 1663 aa8.06□□□□□ -1.12
RPGRIP1-204ENST00000553927 PNMA6EA0A0J9YXQ4 647 aa8.05□□□□□ -1.12
RPGRIP1-204ENST00000553927 CCDC34Q96HJ3 373 aa8.05□□□□□ -1.12
RPGRIP1-204ENST00000553927 ZRANB1Q9UGI0 708 aa8.05□□□□□ -1.12
RPGRIP1-204ENST00000553927 SNX14Q9Y5W7 946 aa8.05□□□□□ -1.12
RPGRIP1-204ENST00000553927 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.05□□□□□ -1.12
RPGRIP1-204ENST00000553927 SLC4A2P04920 1241 aa8.05□□□□□ -1.12
RPGRIP1-204ENST00000553927 CLCN6P51797 869 aa8.05□□□□□ -1.12
RPGRIP1-204ENST00000553927 SYCP1Q15431 976 aa8.05□□□□□ -1.12
RPGRIP1-204ENST00000553927 CWC27Q6UX04 472 aaKnown RBP8.05□□□□□ -1.12
RPGRIP1-204ENST00000553927 NFATC2IPQ8NCF5 419 aa8.05□□□□□ -1.12
RPGRIP1-204ENST00000553927 BICD2Q8TD16 824 aa8.05□□□□□ -1.12
RPGRIP1-204ENST00000553927 TOMM22Q9NS69 142 aa8.05□□□□□ -1.12
RPGRIP1-204ENST00000553927 CCDC69A6NI79 296 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 NR1I2O75469 434 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 ARHGAP29Q52LW3 1261 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 PLA2G4DQ86XP0 818 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 LRRC8AQ8IWT6 810 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 LRRCC1Q9C099 1032 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 FHOD1Q9Y613 1164 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 SBNO2Q9Y2G9 1366 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 HMMRO75330 724 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 SLU7O95391 586 aaKnown RBP8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 PLA2G4AP47712 749 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 STK3Q13188 491 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 RRS1Q15050 365 aaKnown RBP8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 ADCK5Q3MIX3 580 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 EFCAB2Q5VUJ9 269 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 C11orf57Q6ZUT1 292 aaPredicted RBP8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 SMARCE1Q969G3 411 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 C14orf93Q9H972 538 aaKnown RBP8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 POLKQ9UBT6 870 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 LIMCH1Q9UPQ0 1083 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 ATP6V1DQ9Y5K8 247 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 REREQ9P2R6 1566 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 CFAP65Q6ZU64 1925 aaKnown RBP8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 PPFIA3O75145 1194 aa8.04□□□□□ -1.12
RPGRIP1-204ENST00000553927 PNMA6AP0CW24 399 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms