RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 ERBB4Q15303 1308 aa6.71□□□□□ -1.34
VRK1-202ENST00000553683 ARID3CA6NKF2 412 aa6.7□□□□□ -1.34
VRK1-202ENST00000553683 SFI1A8K8P3 1242 aa6.7□□□□□ -1.34
VRK1-202ENST00000553683 CSB-PGBD3P0DP91 1061 aa6.7□□□□□ -1.34
VRK1-202ENST00000553683 TATP17735 454 aaPredicted RBP6.7□□□□□ -1.34
VRK1-202ENST00000553683 MSX1P28360 303 aa6.7□□□□□ -1.34
VRK1-202ENST00000553683 NOS2P35228 1153 aa6.7□□□□□ -1.34
VRK1-202ENST00000553683 VEGFBP49765 207 aa6.7□□□□□ -1.34
VRK1-202ENST00000553683 DBN1Q16643 649 aa6.7□□□□□ -1.34
VRK1-202ENST00000553683 LCE2CQ5TA81 110 aa6.7□□□□□ -1.34
VRK1-202ENST00000553683 C1orf53Q5VUE5 145 aa6.7□□□□□ -1.34
VRK1-202ENST00000553683 NLRP8Q86W28 1048 aa6.7□□□□□ -1.34
VRK1-202ENST00000553683 PGBD3Q8N328 593 aa6.7□□□□□ -1.34
VRK1-202ENST00000553683 VWA5B2Q8N398 1253 aa6.7□□□□□ -1.34
VRK1-202ENST00000553683 CCDC82Q8N4S0 544 aa6.7□□□□□ -1.34
VRK1-202ENST00000553683 ZNF837Q96EG3 531 aaPredicted RBP6.7□□□□□ -1.34
VRK1-202ENST00000553683 GAS2L1Q99501 681 aaPredicted RBP6.7□□□□□ -1.34
VRK1-202ENST00000553683 CABP1Q9NZU7 370 aa6.7□□□□□ -1.34
VRK1-202ENST00000553683 SERTM1A2A2V5 107 aa6.69□□□□□ -1.34
VRK1-202ENST00000553683 IGFBP4P22692 258 aa6.69□□□□□ -1.34
VRK1-202ENST00000553683 PHKA2P46019 1235 aa6.69□□□□□ -1.34
VRK1-202ENST00000553683 PLA2G4AP47712 749 aa6.69□□□□□ -1.34
VRK1-202ENST00000553683 INSM1Q01101 510 aaPredicted RBP6.69□□□□□ -1.34
VRK1-202ENST00000553683 EFHC2Q5JST6 749 aa6.69□□□□□ -1.34
VRK1-202ENST00000553683 FIGNL1Q6PIW4 674 aa6.69□□□□□ -1.34
VRK1-202ENST00000553683 RIPOR1Q6ZS17 1223 aa6.69□□□□□ -1.34
VRK1-202ENST00000553683 TSEN2Q8NCE0 465 aaKnown RBP6.69□□□□□ -1.34
VRK1-202ENST00000553683 L3MBTL2Q969R5 705 aa6.69□□□□□ -1.34
VRK1-202ENST00000553683 CFHR5Q9BXR6 569 aa6.69□□□□□ -1.34
VRK1-202ENST00000553683 NUCKS1Q9H1E3 243 aaKnown RBP6.69□□□□□ -1.34
VRK1-202ENST00000553683 ACIN1Q9UKV3 1341 aaKnown RBP6.69□□□□□ -1.34
VRK1-202ENST00000553683 ATAD2Q6PL18 1390 aa6.69□□□□□ -1.34
VRK1-202ENST00000553683 ATP4AP20648 1035 aa6.68□□□□□ -1.34
VRK1-202ENST00000553683 GMPRP36959 345 aa6.68□□□□□ -1.34
VRK1-202ENST00000553683 TRERF1Q96PN7 1200 aa6.68□□□□□ -1.34
VRK1-202ENST00000553683 TSPAN10Q9H1Z9 355 aaPredicted RBP6.68□□□□□ -1.34
VRK1-202ENST00000553683 C1orf115Q9H7X2 142 aa6.68□□□□□ -1.34
VRK1-202ENST00000553683 CUEDC1Q9NWM3 386 aaPredicted RBP6.68□□□□□ -1.34
VRK1-202ENST00000553683 TIMELESSQ9UNS1 1208 aa6.68□□□□□ -1.34
VRK1-202ENST00000553683 NOVA2Q9UNW9 492 aaKnown RBP6.68□□□□□ -1.34
VRK1-202ENST00000553683 PHF24Q9UPV7 400 aa6.68□□□□□ -1.34
VRK1-202ENST00000553683 USP3Q9Y6I4 520 aa6.68□□□□□ -1.34
VRK1-202ENST00000553683 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.67□□□□□ -1.34
VRK1-202ENST00000553683 CDC14CA4D256 554 aa6.67□□□□□ -1.34
VRK1-202ENST00000553683 EML1O00423 815 aa6.67□□□□□ -1.34
VRK1-202ENST00000553683 C21orf2O43822 256 aa6.67□□□□□ -1.34
VRK1-202ENST00000553683 ZDHHC1Q8WTX9 485 aa6.67□□□□□ -1.34
VRK1-202ENST00000553683 FOXO3O43524 673 aa6.66□□□□□ -1.34
VRK1-202ENST00000553683 WEE1P30291 646 aa6.66□□□□□ -1.34
VRK1-202ENST00000553683 UBAP2LQ14157 1087 aaKnown RBP6.66□□□□□ -1.34
VRK1-202ENST00000553683 HIF1AQ16665 826 aa6.66□□□□□ -1.34
VRK1-202ENST00000553683 SAMD5Q5TGI4 173 aa6.66□□□□□ -1.34
VRK1-202ENST00000553683 GPR161Q8N6U8 529 aaKnown RBP6.66□□□□□ -1.34
VRK1-202ENST00000553683 AIDAQ96BJ3 306 aa6.66□□□□□ -1.34
VRK1-202ENST00000553683 HINFPQ9BQA5 517 aa6.66□□□□□ -1.34
VRK1-202ENST00000553683 C2orf49Q9BVC5 232 aaPredicted RBP6.66□□□□□ -1.34
VRK1-202ENST00000553683 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.66□□□□□ -1.34
VRK1-202ENST00000553683 PPP1R12BO60237 982 aaPredicted RBP6.65□□□□□ -1.34
VRK1-202ENST00000553683 C7orf43Q8WVR3 580 aa6.65□□□□□ -1.34
VRK1-202ENST00000553683 COL25A1Q9BXS0 654 aaPredicted RBP6.65□□□□□ -1.34
VRK1-202ENST00000553683 GPAMQ9HCL2 828 aa6.65□□□□□ -1.34
VRK1-202ENST00000553683 ANKIB1Q9P2G1 1089 aa6.65□□□□□ -1.34
VRK1-202ENST00000553683 ZMIZ1Q9ULJ6 1067 aa6.65□□□□□ -1.34
VRK1-202ENST00000553683 ATXN7L1Q9ULK2 861 aaPredicted RBP6.65□□□□□ -1.34
VRK1-202ENST00000553683 ZNF232Q9UNY5 417 aa6.65□□□□□ -1.34
VRK1-202ENST00000553683 SRSF11Q05519 484 aaKnown RBP6.64□□□□□ -1.35
VRK1-202ENST00000553683 FAM69CQ0P6D2 419 aa6.64□□□□□ -1.35
VRK1-202ENST00000553683 SCG3Q8WXD2 468 aaKnown RBP6.64□□□□□ -1.35
VRK1-202ENST00000553683 ZIC5Q96T25 663 aa6.64□□□□□ -1.35
VRK1-202ENST00000553683 RUBCNLQ9H714 662 aa6.64□□□□□ -1.35
VRK1-202ENST00000553683 MBIPQ9NS73 344 aa6.64□□□□□ -1.35
VRK1-202ENST00000553683 NDFIP2Q9NV92 336 aa6.64□□□□□ -1.35
VRK1-202ENST00000553683 NSFL1CQ9UNZ2 370 aaKnown RBP6.64□□□□□ -1.35
VRK1-202ENST00000553683 PCDHGC4Q9Y5F7 938 aa6.64□□□□□ -1.35
VRK1-202ENST00000553683 A0A1W2PNR3 127 aa6.63□□□□□ -1.35
VRK1-202ENST00000553683 THBS1P07996 1170 aa6.63□□□□□ -1.35
VRK1-202ENST00000553683 SLURP2P0DP57 97 aa6.63□□□□□ -1.35
VRK1-202ENST00000553683 LAMC2Q13753 1193 aa6.63□□□□□ -1.35
VRK1-202ENST00000553683 CDCA8Q53HL2 280 aa6.63□□□□□ -1.35
VRK1-202ENST00000553683 ARSJQ5FYB0 599 aaPredicted RBP6.63□□□□□ -1.35
VRK1-202ENST00000553683 CLP1Q92989 425 aaKnown RBP6.63□□□□□ -1.35
VRK1-202ENST00000553683 GTPBP3Q969Y2 492 aaKnown RBP6.63□□□□□ -1.35
VRK1-202ENST00000553683 COL26A1Q96A83 441 aa6.63□□□□□ -1.35
VRK1-202ENST00000553683 LRRC4BQ9NT99 713 aa6.63□□□□□ -1.35
VRK1-202ENST00000553683 FAM157BP0CG42 384 aa6.62□□□□□ -1.35
VRK1-202ENST00000553683 TXLNAP40222 546 aa6.62□□□□□ -1.35
VRK1-202ENST00000553683 KRT76Q01546 638 aa6.62□□□□□ -1.35
VRK1-202ENST00000553683 GAS6Q14393 721 aa6.62□□□□□ -1.35
VRK1-202ENST00000553683 FAM182BQ5T319 152 aa6.62□□□□□ -1.35
VRK1-202ENST00000553683 BICDL1Q6ZP65 573 aa6.62□□□□□ -1.35
VRK1-202ENST00000553683 ZCCHC2Q9C0B9 1178 aaKnown RBP6.62□□□□□ -1.35
VRK1-202ENST00000553683 FAM181BA6NEQ2 426 aa6.61□□□□□ -1.35
VRK1-202ENST00000553683 MAP2K3P46734 347 aa6.61□□□□□ -1.35
VRK1-202ENST00000553683 RTN1Q16799 776 aa6.61□□□□□ -1.35
VRK1-202ENST00000553683 RNFT1Q5M7Z0 435 aa6.61□□□□□ -1.35
VRK1-202ENST00000553683 TBCELQ5QJ74 424 aa6.61□□□□□ -1.35
VRK1-202ENST00000553683 IER5Q5VY09 327 aa6.61□□□□□ -1.35
VRK1-202ENST00000553683 ALDH16A1Q8IZ83 802 aa6.61□□□□□ -1.35
VRK1-202ENST00000553683 MYO19Q96H55 970 aa6.61□□□□□ -1.35
VRK1-202ENST00000553683 CNTNAP3BQ96NU0 1288 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms