RNA–Protein interactions for RNA: ENST00000553615.5

FCF1-203, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3 BASIC

Gene FCF1, Length 954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-203ENST00000553615 KDM2BQ8NHM5 1336 aa8.71□□□□□ -1.02
FCF1-203ENST00000553615 UACAQ9BZF9 1416 aa8.71□□□□□ -1.02
FCF1-203ENST00000553615 CCDC18Q5T9S5 1454 aa8.7□□□□□ -1.02
FCF1-203ENST00000553615 RUSC2Q8N2Y8 1516 aa8.7□□□□□ -1.02
FCF1-203ENST00000553615 VGLL3A8MV65 326 aa8.7□□□□□ -1.02
FCF1-203ENST00000553615 GTF2F1P35269 517 aaKnown RBP eCLIP8.7□□□□□ -1.02
FCF1-203ENST00000553615 WDR4P57081 412 aaKnown RBP8.7□□□□□ -1.02
FCF1-203ENST00000553615 CTC1Q2NKJ3 1217 aa8.7□□□□□ -1.02
FCF1-203ENST00000553615 GLMNQ92990 594 aa8.7□□□□□ -1.02
FCF1-203ENST00000553615 CALR3Q96L12 384 aaKnown RBP8.7□□□□□ -1.02
FCF1-203ENST00000553615 FEZ1Q99689 392 aa8.7□□□□□ -1.02
FCF1-203ENST00000553615 PRDM10Q9NQV6 1147 aa8.7□□□□□ -1.02
FCF1-203ENST00000553615 ZNF777Q9ULD5 760 aaPredicted RBP8.7□□□□□ -1.02
FCF1-203ENST00000553615 NOL7Q9UMY1 257 aaKnown RBP8.7□□□□□ -1.02
FCF1-203ENST00000553615 LRPPRCP42704 1394 aaKnown RBP8.7□□□□□ -1.02
FCF1-203ENST00000553615 UHRF1BP1LA0JNW5 1464 aa8.7□□□□□ -1.02
FCF1-203ENST00000553615 APPP05067 770 aa8.69□□□□□ -1.02
FCF1-203ENST00000553615 CC2D1BQ5T0F9 858 aaKnown RBP8.69□□□□□ -1.02
FCF1-203ENST00000553615 PPP1R26Q5T8A7 1209 aaPredicted RBP8.69□□□□□ -1.02
FCF1-203ENST00000553615 RNF135Q8IUD6 432 aa8.69□□□□□ -1.02
FCF1-203ENST00000553615 EXOC6Q8TAG9 804 aa8.69□□□□□ -1.02
FCF1-203ENST00000553615 CALCOCO1Q9P1Z2 691 aa8.69□□□□□ -1.02
FCF1-203ENST00000553615 RCAN3Q9UKA8 241 aa8.69□□□□□ -1.02
FCF1-203ENST00000553615 R3HCC1Q9Y3T6 440 aaKnown RBP8.69□□□□□ -1.02
FCF1-203ENST00000553615 EIF3AQ14152 1382 aaKnown RBP8.69□□□□□ -1.02
FCF1-203ENST00000553615 NLRP1Q9C000 1473 aa8.69□□□□□ -1.02
FCF1-203ENST00000553615 ERVH48-1M5A8F1 160 aa8.68□□□□□ -1.02
FCF1-203ENST00000553615 CLSTN1O94985 981 aa8.68□□□□□ -1.02
FCF1-203ENST00000553615 TICAM2Q86XR7 235 aa8.68□□□□□ -1.02
FCF1-203ENST00000553615 MYRIPQ8NFW9 859 aa8.68□□□□□ -1.02
FCF1-203ENST00000553615 ADAMTS19Q8TE59 1207 aa8.68□□□□□ -1.02
FCF1-203ENST00000553615 TIGD1Q96MW7 591 aa8.68□□□□□ -1.02
FCF1-203ENST00000553615 CHMP5Q9NZZ3 219 aa8.68□□□□□ -1.02
FCF1-203ENST00000553615 ARHGAP31Q2M1Z3 1444 aa8.68□□□□□ -1.02
FCF1-203ENST00000553615 CAPN5O15484 640 aaPredicted RBP8.67□□□□□ -1.02
FCF1-203ENST00000553615 ZIC2O95409 532 aaPredicted RBP8.67□□□□□ -1.02
FCF1-203ENST00000553615 TIMP2P16035 220 aa8.67□□□□□ -1.02
FCF1-203ENST00000553615 SMCPP49901 116 aaPredicted RBP8.67□□□□□ -1.02
FCF1-203ENST00000553615 MFAP1P55081 439 aaKnown RBP8.67□□□□□ -1.02
FCF1-203ENST00000553615 ITPKCQ96DU7 683 aa8.67□□□□□ -1.02
FCF1-203ENST00000553615 MIA2Q96PC5 1412 aa8.67□□□□□ -1.02
FCF1-203ENST00000553615 CGNQ9P2M7 1197 aaKnown RBP8.67□□□□□ -1.02
FCF1-203ENST00000553615 MAPK8IP3Q9UPT6 1336 aa8.67□□□□□ -1.02
FCF1-203ENST00000553615 RAPGEF2Q9Y4G8 1499 aa8.66□□□□□ -1.02
FCF1-203ENST00000553615 YEATS2Q9ULM3 1422 aa8.66□□□□□ -1.02
FCF1-203ENST00000553615 TULP2O00295 520 aa8.66□□□□□ -1.02
FCF1-203ENST00000553615 AXIN1O15169 862 aa8.66□□□□□ -1.02
FCF1-203ENST00000553615 HSP90AB1P08238 724 aaKnown RBP8.66□□□□□ -1.02
FCF1-203ENST00000553615 CRIPAKQ8N1N5 446 aa8.66□□□□□ -1.02
FCF1-203ENST00000553615 PHTF2Q8N3S3 785 aa8.66□□□□□ -1.02
FCF1-203ENST00000553615 PDCL2Q8N4E4 241 aa8.66□□□□□ -1.02
FCF1-203ENST00000553615 KLF16Q9BXK1 252 aaPredicted RBP8.66□□□□□ -1.02
FCF1-203ENST00000553615 ESF1Q9H501 851 aaKnown RBP8.66□□□□□ -1.02
FCF1-203ENST00000553615 UPF2Q9HAU5 1272 aaKnown RBP8.66□□□□□ -1.02
FCF1-203ENST00000553615 TMPRSS4Q9NRS4 437 aa8.66□□□□□ -1.02
FCF1-203ENST00000553615 PCDHB11Q9Y5F2 797 aa8.66□□□□□ -1.02
FCF1-203ENST00000553615 GCC2Q8IWJ2 1684 aa8.65□□□□□ -1.02
FCF1-203ENST00000553615 BRD4O60885 1362 aaPredicted RBP8.65□□□□□ -1.02
FCF1-203ENST00000553615 ZFAND3Q9H8U3 227 aa8.65□□□□□ -1.02
FCF1-203ENST00000553615 ZKSCAN5Q9Y2L8 839 aa8.65□□□□□ -1.02
FCF1-203ENST00000553615 PTPN23Q9H3S7 1636 aa8.65□□□□□ -1.03
FCF1-203ENST00000553615 NCOA3Q9Y6Q9 1424 aa8.64□□□□□ -1.03
FCF1-203ENST00000553615 NASPP49321 788 aaPredicted RBP8.64□□□□□ -1.03
FCF1-203ENST00000553615 MAP7D1Q3KQU3 841 aa8.64□□□□□ -1.03
FCF1-203ENST00000553615 ZNF771Q7L3S4 317 aaPredicted RBP8.64□□□□□ -1.03
FCF1-203ENST00000553615 ZNF784Q8NCA9 323 aaPredicted RBP8.64□□□□□ -1.03
FCF1-203ENST00000553615 NFATC2IPQ8NCF5 419 aa8.64□□□□□ -1.03
FCF1-203ENST00000553615 GBP4Q96PP9 640 aa8.64□□□□□ -1.03
FCF1-203ENST00000553615 CCDC85AQ96PX6 553 aaPredicted RBP8.64□□□□□ -1.03
FCF1-203ENST00000553615 DOLKQ9UPQ8 538 aa8.64□□□□□ -1.03
FCF1-203ENST00000553615 CCDC9Q9Y3X0 531 aaKnown RBP8.64□□□□□ -1.03
FCF1-203ENST00000553615 E9PCH4 1651 aa8.63□□□□□ -1.03
FCF1-203ENST00000553615 PIK3CDO00329 1044 aa8.63□□□□□ -1.03
FCF1-203ENST00000553615 SKIP12755 728 aa8.63□□□□□ -1.03
FCF1-203ENST00000553615 TRAF7Q6Q0C0 670 aa8.63□□□□□ -1.03
FCF1-203ENST00000553615 PLPP7Q8NBV4 271 aa8.63□□□□□ -1.03
FCF1-203ENST00000553615 PDLIM2Q96JY6 352 aa8.63□□□□□ -1.03
FCF1-203ENST00000553615 BRMS1Q9HCU9 246 aa8.63□□□□□ -1.03
FCF1-203ENST00000553615 CYLDQ9NQC7 956 aa8.63□□□□□ -1.03
FCF1-203ENST00000553615 CCDC39Q9UFE4 941 aa8.63□□□□□ -1.03
FCF1-203ENST00000553615 RAD50Q92878 1312 aa8.62□□□□□ -1.03
FCF1-203ENST00000553615 MYCP01106 439 aaPredicted RBP8.62□□□□□ -1.03
FCF1-203ENST00000553615 SYCP1Q15431 976 aa8.62□□□□□ -1.03
FCF1-203ENST00000553615 CCDC184Q52MB2 194 aa8.62□□□□□ -1.03
FCF1-203ENST00000553615 CC2D2BQ6DHV5 1058 aa8.62□□□□□ -1.03
FCF1-203ENST00000553615 TMC1Q8TDI8 760 aa8.62□□□□□ -1.03
FCF1-203ENST00000553615 SIRT1Q96EB6 747 aa8.62□□□□□ -1.03
FCF1-203ENST00000553615 AAASQ9NRG9 546 aa8.62□□□□□ -1.03
FCF1-203ENST00000553615 CHIC2Q9UKJ5 165 aa8.62□□□□□ -1.03
FCF1-203ENST00000553615 ST8SIA5O15466 376 aa8.61□□□□□ -1.03
FCF1-203ENST00000553615 HSPA5P11021 654 aaKnown RBP8.61□□□□□ -1.03
FCF1-203ENST00000553615 KCNJ4P48050 445 aa8.61□□□□□ -1.03
FCF1-203ENST00000553615 ERVK-9P63128 1117 aa8.61□□□□□ -1.03
FCF1-203ENST00000553615 SETQ01105 290 aaPredicted RBP8.61□□□□□ -1.03
FCF1-203ENST00000553615 USP4Q13107 963 aa8.61□□□□□ -1.03
FCF1-203ENST00000553615 OXLD1Q5BKU9 147 aa8.61□□□□□ -1.03
FCF1-203ENST00000553615 UCN2Q96RP3 112 aa8.61□□□□□ -1.03
FCF1-203ENST00000553615 MYCBPQ99417 103 aaPredicted RBP8.61□□□□□ -1.03
FCF1-203ENST00000553615 CARD10Q9BWT7 1032 aa8.61□□□□□ -1.03
FCF1-203ENST00000553615 OGFRQ9NZT2 677 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms