RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 BABAM1Q9NWV8 329 aa6.45□□□□□ -1.38
TMEM55B-204ENST00000553602 CACNA1FO60840 1977 aa6.45□□□□□ -1.38
TMEM55B-204ENST00000553602 SALL3Q9BXA9 1300 aa6.45□□□□□ -1.38
TMEM55B-204ENST00000553602 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.45□□□□□ -1.38
TMEM55B-204ENST00000553602 SBNO1A3KN83 1393 aa6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 TMEM2Q9UHN6 1383 aa6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 MED1Q15648 1581 aaPredicted RBP6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 ANKARQ7Z5J8 1434 aa6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 ERC2O15083 957 aa6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 ZMYND10O75800 440 aa6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 MBD3O95983 291 aa6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 HMOX1P09601 288 aa6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 SSFA2P28290 1259 aa6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 NASPP49321 788 aaPredicted RBP6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 FBXO31Q5XUX0 539 aaPredicted RBP6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 GAS2L3Q86XJ1 694 aa6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 MICALL2Q8IY33 904 aa6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 INTS4Q96HW7 963 aaKnown RBP6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 PDLIM2Q96JY6 352 aa6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 THUMPD2Q9BTF0 503 aaKnown RBP6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 SLC24A3Q9HC58 644 aa6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 LMTK3Q96Q04 1460 aa6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 SLIT1O75093 1534 aa6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 ERBB4Q15303 1308 aa6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 FLT4P35916 1363 aa6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 TNRQ92752 1358 aa6.44□□□□□ -1.38
TMEM55B-204ENST00000553602 ARHGAP23Q9P227 1491 aa6.43□□□□□ -1.38
TMEM55B-204ENST00000553602 SPDYE16A6NNV3 312 aaPredicted RBP6.43□□□□□ -1.38
TMEM55B-204ENST00000553602 SDSP20132 328 aa6.43□□□□□ -1.38
TMEM55B-204ENST00000553602 CUL4AQ13619 759 aa6.43□□□□□ -1.38
TMEM55B-204ENST00000553602 EIF4A2Q14240 407 aaKnown RBP6.43□□□□□ -1.38
TMEM55B-204ENST00000553602 GLIPR1L2Q4G1C9 344 aa6.43□□□□□ -1.38
TMEM55B-204ENST00000553602 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.43□□□□□ -1.38
TMEM55B-204ENST00000553602 SRCIN1Q9C0H9 1055 aa6.43□□□□□ -1.38
TMEM55B-204ENST00000553602 C1orf115Q9H7X2 142 aa6.43□□□□□ -1.38
TMEM55B-204ENST00000553602 LMBRD1Q9NUN5 540 aa6.43□□□□□ -1.38
TMEM55B-204ENST00000553602 DDX49Q9Y6V7 483 aaKnown RBP6.43□□□□□ -1.38
TMEM55B-204ENST00000553602 PRR36Q9H6K5 1346 aa6.43□□□□□ -1.38
TMEM55B-204ENST00000553602 PHRF1Q9P1Y6 1649 aaKnown RBP6.43□□□□□ -1.38
TMEM55B-204ENST00000553602 G3V3G9 751 aa6.42□□□□□ -1.38
TMEM55B-204ENST00000553602 ZNF500O60304 480 aaPredicted RBP6.42□□□□□ -1.38
TMEM55B-204ENST00000553602 OFD1O75665 1012 aa6.42□□□□□ -1.38
TMEM55B-204ENST00000553602 GNAI3P08754 354 aa6.42□□□□□ -1.38
TMEM55B-204ENST00000553602 FOXK1P85037 733 aa6.42□□□□□ -1.38
TMEM55B-204ENST00000553602 DSG2Q14126 1118 aa6.42□□□□□ -1.38
TMEM55B-204ENST00000553602 DPY19L2Q6NUT2 758 aa6.42□□□□□ -1.38
TMEM55B-204ENST00000553602 WAPLQ7Z5K2 1190 aa6.42□□□□□ -1.38
TMEM55B-204ENST00000553602 PDCD7Q8N8D1 485 aaKnown RBP6.42□□□□□ -1.38
TMEM55B-204ENST00000553602 STAP2Q9UGK3 403 aa6.42□□□□□ -1.38
TMEM55B-204ENST00000553602 IGSF1Q8N6C5 1336 aa6.42□□□□□ -1.38
TMEM55B-204ENST00000553602 PIK3C2AO00443 1686 aa6.42□□□□□ -1.38
TMEM55B-204ENST00000553602 ROBO2Q9HCK4 1378 aa6.42□□□□□ -1.38
TMEM55B-204ENST00000553602 NWD1Q149M9 1564 aa6.41□□□□□ -1.38
TMEM55B-204ENST00000553602 DPYSL4O14531 572 aa6.41□□□□□ -1.38
TMEM55B-204ENST00000553602 MCCP23508 829 aa6.41□□□□□ -1.38
TMEM55B-204ENST00000553602 PDE1AP54750 535 aa6.41□□□□□ -1.38
TMEM55B-204ENST00000553602 ZSCAN23Q3MJ62 389 aa6.41□□□□□ -1.38
TMEM55B-204ENST00000553602 IER5LQ5T953 404 aa6.41□□□□□ -1.38
TMEM55B-204ENST00000553602 BARGINQ6ZT62 677 aa6.41□□□□□ -1.38
TMEM55B-204ENST00000553602 GPIHBP1Q8IV16 184 aa6.41□□□□□ -1.38
TMEM55B-204ENST00000553602 TMEM87AQ8NBN3 555 aa6.41□□□□□ -1.38
TMEM55B-204ENST00000553602 NAP1L5Q96NT1 182 aaPredicted RBP6.41□□□□□ -1.38
TMEM55B-204ENST00000553602 CHMP4AQ9BY43 222 aa6.41□□□□□ -1.38
TMEM55B-204ENST00000553602 NOL7Q9UMY1 257 aaKnown RBP6.41□□□□□ -1.38
TMEM55B-204ENST00000553602 MARF1Q9Y4F3 1742 aaKnown RBP6.41□□□□□ -1.38
TMEM55B-204ENST00000553602 OVOS2A0A0G2JMS6 1433 aa6.41□□□□□ -1.38
TMEM55B-204ENST00000553602 ADGRL3Q9HAR2 1447 aa6.41□□□□□ -1.38
TMEM55B-204ENST00000553602 PHF14O94880 888 aa6.4□□□□□ -1.38
TMEM55B-204ENST00000553602 BRD1O95696 1058 aa6.4□□□□□ -1.38
TMEM55B-204ENST00000553602 GNAI2P04899 355 aa6.4□□□□□ -1.38
TMEM55B-204ENST00000553602 MLLT3P42568 568 aaPredicted RBP6.4□□□□□ -1.38
TMEM55B-204ENST00000553602 ATN1P54259 1190 aaPredicted RBP6.4□□□□□ -1.38
TMEM55B-204ENST00000553602 PDIA6Q15084 440 aa6.4□□□□□ -1.38
TMEM55B-204ENST00000553602 SULT6B1Q6IMI4 303 aa6.4□□□□□ -1.38
TMEM55B-204ENST00000553602 LRSAM1Q6UWE0 723 aa6.4□□□□□ -1.38
TMEM55B-204ENST00000553602 SYAP1Q96A49 352 aaPredicted RBP6.4□□□□□ -1.38
TMEM55B-204ENST00000553602 MAP7D2Q96T17 732 aa6.4□□□□□ -1.38
TMEM55B-204ENST00000553602 MEIS3Q99687 375 aa6.4□□□□□ -1.38
TMEM55B-204ENST00000553602 ESYT1Q9BSJ8 1104 aa6.4□□□□□ -1.38
TMEM55B-204ENST00000553602 OCEL1Q9H607 264 aa6.4□□□□□ -1.38
TMEM55B-204ENST00000553602 EMILIN3Q9NT22 766 aa6.4□□□□□ -1.38
TMEM55B-204ENST00000553602 BOLA1Q9Y3E2 137 aa6.4□□□□□ -1.38
TMEM55B-204ENST00000553602 CEP170BQ9Y4F5 1589 aaPredicted RBP6.4□□□□□ -1.39
TMEM55B-204ENST00000553602 FAM83GA6ND36 823 aa6.39□□□□□ -1.39
TMEM55B-204ENST00000553602 HOXB7P09629 217 aa6.39□□□□□ -1.39
TMEM55B-204ENST00000553602 PDIA4P13667 645 aaKnown RBP6.39□□□□□ -1.39
TMEM55B-204ENST00000553602 MSNP26038 577 aaKnown RBP6.39□□□□□ -1.39
TMEM55B-204ENST00000553602 IRX5P78411 483 aaPredicted RBP6.39□□□□□ -1.39
TMEM55B-204ENST00000553602 RRS1Q15050 365 aaKnown RBP6.39□□□□□ -1.39
TMEM55B-204ENST00000553602 CSPP1Q1MSJ5 1256 aa6.39□□□□□ -1.39
TMEM55B-204ENST00000553602 RBM26Q5T8P6 1007 aaKnown RBP6.39□□□□□ -1.39
TMEM55B-204ENST00000553602 MCTP1Q6DN14 999 aa6.39□□□□□ -1.39
TMEM55B-204ENST00000553602 ASTLQ6HA08 431 aaPredicted RBP6.39□□□□□ -1.39
TMEM55B-204ENST00000553602 MTERF4Q7Z6M4 381 aaKnown RBP6.39□□□□□ -1.39
TMEM55B-204ENST00000553602 FAM184AQ8NB25 1140 aa6.39□□□□□ -1.39
TMEM55B-204ENST00000553602 TMEM121BQ9BXQ6 578 aaPredicted RBP6.39□□□□□ -1.39
TMEM55B-204ENST00000553602 LRRCC1Q9C099 1032 aa6.39□□□□□ -1.39
TMEM55B-204ENST00000553602 ZDHHC9Q9Y397 364 aa6.39□□□□□ -1.39
TMEM55B-204ENST00000553602 ACEP12821 1306 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms