RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 FKBP4Q02790 459 aaKnown RBP eCLIP9.01□□□□□ -0.97
SYNE2-210ENST00000553455 C16orf46Q6P387 395 aa9.01□□□□□ -0.97
SYNE2-210ENST00000553455 NPM2Q86SE8 214 aaKnown RBP9.01□□□□□ -0.97
SYNE2-210ENST00000553455 TNFRSF10BO14763 440 aa9□□□□□ -0.97
SYNE2-210ENST00000553455 CAPN5O15484 640 aaPredicted RBP9□□□□□ -0.97
SYNE2-210ENST00000553455 SPINT1O43278 529 aa9□□□□□ -0.97
SYNE2-210ENST00000553455 NPR3P17342 541 aa9□□□□□ -0.97
SYNE2-210ENST00000553455 ARHGAP4P98171 946 aa9□□□□□ -0.97
SYNE2-210ENST00000553455 COX20Q5RI15 118 aa9□□□□□ -0.97
SYNE2-210ENST00000553455 LINC00528Q8N1L1 170 aa9□□□□□ -0.97
SYNE2-210ENST00000553455 ZSCAN10Q96SZ4 725 aaPredicted RBP9□□□□□ -0.97
SYNE2-210ENST00000553455 INSM2Q96T92 566 aaPredicted RBP9□□□□□ -0.97
SYNE2-210ENST00000553455 TSEN34Q9BSV6 310 aaKnown RBP9□□□□□ -0.97
SYNE2-210ENST00000553455 GRIP2Q9C0E4 1043 aa9□□□□□ -0.97
SYNE2-210ENST00000553455 SERTM1A2A2V5 107 aa8.99□□□□□ -0.97
SYNE2-210ENST00000553455 RGS20O76081 388 aa8.99□□□□□ -0.97
SYNE2-210ENST00000553455 GPC1P35052 558 aa8.99□□□□□ -0.97
SYNE2-210ENST00000553455 NOS2P35228 1153 aa8.99□□□□□ -0.97
SYNE2-210ENST00000553455 MYO19Q96H55 970 aa8.99□□□□□ -0.97
SYNE2-210ENST00000553455 CABP1Q9NZU7 370 aa8.99□□□□□ -0.97
SYNE2-210ENST00000553455 LRFN2Q9ULH4 789 aa8.99□□□□□ -0.97
SYNE2-210ENST00000553455 PDZRN3Q9UPQ7 1066 aa8.99□□□□□ -0.97
SYNE2-210ENST00000553455 RNF144AP50876 292 aaPredicted RBP8.98□□□□□ -0.97
SYNE2-210ENST00000553455 MARSP56192 900 aaKnown RBP8.98□□□□□ -0.97
SYNE2-210ENST00000553455 RHBDD1Q8TEB9 315 aa8.98□□□□□ -0.97
SYNE2-210ENST00000553455 L3MBTL2Q969R5 705 aa8.98□□□□□ -0.97
SYNE2-210ENST00000553455 PARP3Q9Y6F1 533 aa8.98□□□□□ -0.97
SYNE2-210ENST00000553455 MPSTP25325 297 aa8.97□□□□□ -0.97
SYNE2-210ENST00000553455 CTSOP43234 321 aaPredicted RBP8.97□□□□□ -0.97
SYNE2-210ENST00000553455 NIFKQ9BYG3 293 aaKnown RBP8.97□□□□□ -0.97
SYNE2-210ENST00000553455 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.97□□□□□ -0.97
SYNE2-210ENST00000553455 CHMP3Q9Y3E7 222 aa8.97□□□□□ -0.97
SYNE2-210ENST00000553455 AVPP01185 164 aa8.96□□□□□ -0.98
SYNE2-210ENST00000553455 FAM26DQ5JW98 314 aa8.96□□□□□ -0.98
SYNE2-210ENST00000553455 TMEM214Q6NUQ4 689 aaKnown RBP8.96□□□□□ -0.98
SYNE2-210ENST00000553455 ALDH16A1Q8IZ83 802 aa8.96□□□□□ -0.98
SYNE2-210ENST00000553455 ZNF428Q96B54 188 aa8.96□□□□□ -0.98
SYNE2-210ENST00000553455 NGLY1Q96IV0 654 aa8.96□□□□□ -0.98
SYNE2-210ENST00000553455 ZNF232Q9UNY5 417 aa8.96□□□□□ -0.98
SYNE2-210ENST00000553455 HCN4Q9Y3Q4 1203 aa8.96□□□□□ -0.98
SYNE2-210ENST00000553455 FAM187AA6NFU0 413 aa8.95□□□□□ -0.98
SYNE2-210ENST00000553455 C4orf17Q53FE4 359 aa8.95□□□□□ -0.98
SYNE2-210ENST00000553455 SLC27A3Q5K4L6 730 aa8.95□□□□□ -0.98
SYNE2-210ENST00000553455 MRPL14Q6P1L8 145 aaKnown RBP8.95□□□□□ -0.98
SYNE2-210ENST00000553455 POLMQ9NP87 494 aaPredicted RBP8.95□□□□□ -0.98
SYNE2-210ENST00000553455 SPATA31C2B4DYI2 1134 aa8.94□□□□□ -0.98
SYNE2-210ENST00000553455 FAM13AO94988 1023 aa8.94□□□□□ -0.98
SYNE2-210ENST00000553455 TXLNAP40222 546 aa8.94□□□□□ -0.98
SYNE2-210ENST00000553455 RTN1Q16799 776 aa8.94□□□□□ -0.98
SYNE2-210ENST00000553455 RNF217Q8TC41 542 aa8.94□□□□□ -0.98
SYNE2-210ENST00000553455 PHACTR1Q9C0D0 580 aa8.94□□□□□ -0.98
SYNE2-210ENST00000553455 AMOTL2Q9Y2J4 779 aa8.94□□□□□ -0.98
SYNE2-210ENST00000553455 UPP2O95045 317 aa8.93□□□□□ -0.98
SYNE2-210ENST00000553455 BMP2P12643 396 aa8.93□□□□□ -0.98
SYNE2-210ENST00000553455 PLA2G4AP47712 749 aa8.93□□□□□ -0.98
SYNE2-210ENST00000553455 GNASQ5JWF2 1037 aa8.93□□□□□ -0.98
SYNE2-210ENST00000553455 C6orf118Q5T5N4 469 aa8.93□□□□□ -0.98
SYNE2-210ENST00000553455 STIM2Q9P246 746 aa8.93□□□□□ -0.98
SYNE2-210ENST00000553455 DCTN4Q9UJW0 460 aa8.93□□□□□ -0.98
SYNE2-210ENST00000553455 BMP1P13497 986 aa8.92□□□□□ -0.98
SYNE2-210ENST00000553455 ERCC3P19447 782 aa8.92□□□□□ -0.98
SYNE2-210ENST00000553455 MAPK1P28482 360 aa8.92□□□□□ -0.98
SYNE2-210ENST00000553455 GTF2E1P29083 439 aaPredicted RBP8.92□□□□□ -0.98
SYNE2-210ENST00000553455 C1orf53Q5VUE5 145 aa8.92□□□□□ -0.98
SYNE2-210ENST00000553455 NPAS4Q8IUM7 802 aa8.92□□□□□ -0.98
SYNE2-210ENST00000553455 C7orf43Q8WVR3 580 aa8.92□□□□□ -0.98
SYNE2-210ENST00000553455 ZBTB39O15060 712 aa8.91□□□□□ -0.98
SYNE2-210ENST00000553455 EIF1AXP47813 144 aaKnown RBP8.91□□□□□ -0.98
SYNE2-210ENST00000553455 DGKZQ13574 1117 aa8.91□□□□□ -0.98
SYNE2-210ENST00000553455 TRIM46Q7Z4K8 759 aa8.91□□□□□ -0.98
SYNE2-210ENST00000553455 KLK14Q9P0G3 267 aa8.91□□□□□ -0.98
SYNE2-210ENST00000553455 ANKRD33BA6NCL7 494 aa8.9□□□□□ -0.98
SYNE2-210ENST00000553455 FZD6O60353 706 aa8.9□□□□□ -0.98
SYNE2-210ENST00000553455 SMCPP49901 116 aaPredicted RBP8.9□□□□□ -0.98
SYNE2-210ENST00000553455 NBPF10Q6P3W6 841 aaKnown RBP8.9□□□□□ -0.98
SYNE2-210ENST00000553455 ETFBKMTQ8IXQ9 262 aa8.9□□□□□ -0.98
SYNE2-210ENST00000553455 KLRG1Q96E93 195 aa8.9□□□□□ -0.98
SYNE2-210ENST00000553455 ASB16Q96NS5 453 aa8.9□□□□□ -0.98
SYNE2-210ENST00000553455 BRD2P25440 801 aaKnown RBP8.89□□□□□ -0.99
SYNE2-210ENST00000553455 PHKA2P46019 1235 aa8.89□□□□□ -0.99
SYNE2-210ENST00000553455 POU4F2Q12837 409 aa8.89□□□□□ -0.99
SYNE2-210ENST00000553455 C11orf91Q3C1V1 193 aa8.89□□□□□ -0.99
SYNE2-210ENST00000553455 PRICKLE2Q7Z3G6 844 aa8.89□□□□□ -0.99
SYNE2-210ENST00000553455 ABTB2Q8N961 1025 aa8.89□□□□□ -0.99
SYNE2-210ENST00000553455 ZDHHC3Q9NYG2 299 aa8.89□□□□□ -0.99
SYNE2-210ENST00000553455 BCS1LQ9Y276 419 aa8.89□□□□□ -0.99
SYNE2-210ENST00000553455 SOS2Q07890 1332 aaPredicted RBP8.88□□□□□ -0.99
SYNE2-210ENST00000553455 ATP4AP20648 1035 aa8.88□□□□□ -0.99
SYNE2-210ENST00000553455 RBM25P49756 843 aaKnown RBP8.88□□□□□ -0.99
SYNE2-210ENST00000553455 CTC1Q2NKJ3 1217 aa8.88□□□□□ -0.99
SYNE2-210ENST00000553455 LYSMD3Q7Z3D4 306 aa8.88□□□□□ -0.99
SYNE2-210ENST00000553455 RGL4Q8IZJ4 473 aa8.88□□□□□ -0.99
SYNE2-210ENST00000553455 RBCK1Q9BYM8 510 aa8.88□□□□□ -0.99
SYNE2-210ENST00000553455 CCDC87Q9NVE4 849 aa8.88□□□□□ -0.99
SYNE2-210ENST00000553455 RBM47A0AV96 593 aaKnown RBP8.87□□□□□ -0.99
SYNE2-210ENST00000553455 TTLL8A6PVC2 850 aa8.87□□□□□ -0.99
SYNE2-210ENST00000553455 DGAT1O75907 488 aa8.87□□□□□ -0.99
SYNE2-210ENST00000553455 NBPF1Q3BBV0 1214 aa8.87□□□□□ -0.99
SYNE2-210ENST00000553455 WDR44Q5JSH3 913 aa8.87□□□□□ -0.99
SYNE2-210ENST00000553455 ALKBH2Q6NS38 261 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms