RNA–Protein interactions for RNA: ENST00000553404.5

LIN52-201, Transcript of lin-52 DREAM MuvB core complex component, humanhuman

TSL 2

Gene LIN52, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN52-201ENST00000553404 CASZ1Q86V15 1759 aa12.27□□□□□ -0.45
LIN52-201ENST00000553404 IGHDP01880 384 aa12.26□□□□□ -0.45
LIN52-201ENST00000553404 TBC1D32Q96NH3 1257 aa12.26□□□□□ -0.45
LIN52-201ENST00000553404 ASAP1Q9ULH1 1129 aa12.26□□□□□ -0.45
LIN52-201ENST00000553404 PKD1L3Q7Z443 1732 aa12.26□□□□□ -0.45
LIN52-201ENST00000553404 PAPPAQ13219 1627 aa12.26□□□□□ -0.45
LIN52-201ENST00000553404 TOGARAM1Q9Y4F4 1720 aa12.26□□□□□ -0.45
LIN52-201ENST00000553404 HMOX1P09601 288 aa12.26□□□□□ -0.45
LIN52-201ENST00000553404 GOLGA2Q08379 1002 aa12.26□□□□□ -0.45
LIN52-201ENST00000553404 PALLDQ8WX93 1383 aa12.26□□□□□ -0.45
LIN52-201ENST00000553404 ITGB4P16144 1822 aa12.25□□□□□ -0.45
LIN52-201ENST00000553404 PLEKHO1Q53GL0 409 aaPredicted RBP12.25□□□□□ -0.45
LIN52-201ENST00000553404 ZNF530Q6P9A1 599 aaPredicted RBP12.25□□□□□ -0.45
LIN52-201ENST00000553404 SMIM5Q71RC9 77 aa12.25□□□□□ -0.45
LIN52-201ENST00000553404 PNPLA7Q6ZV29 1317 aa12.25□□□□□ -0.45
LIN52-201ENST00000553404 MTFR1LQ9H019 292 aa12.25□□□□□ -0.45
LIN52-201ENST00000553404 TMOD3Q9NYL9 352 aa12.25□□□□□ -0.45
LIN52-201ENST00000553404 LY75O60449 1722 aa12.25□□□□□ -0.45
LIN52-201ENST00000553404 FAM13BQ9NYF5 915 aa12.24□□□□□ -0.45
LIN52-201ENST00000553404 ADAMTS8Q9UP79 889 aa12.24□□□□□ -0.45
LIN52-201ENST00000553404 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.23□□□□□ -0.45
LIN52-201ENST00000553404 UTRNP46939 3433 aa12.23□□□□□ -0.45
LIN52-201ENST00000553404 MSNP26038 577 aaKnown RBP12.23□□□□□ -0.45
LIN52-201ENST00000553404 ANP32BQ92688 251 aaKnown RBP12.23□□□□□ -0.45
LIN52-201ENST00000553404 SGIP1Q9BQI5 828 aa12.23□□□□□ -0.45
LIN52-201ENST00000553404 DIAPH1O60610 1272 aaKnown RBP12.22□□□□□ -0.45
LIN52-201ENST00000553404 OFD1O75665 1012 aa12.22□□□□□ -0.45
LIN52-201ENST00000553404 WDR43Q15061 677 aaKnown RBP eCLIP12.22□□□□□ -0.45
LIN52-201ENST00000553404 COL23A1Q86Y22 540 aaPredicted RBP12.22□□□□□ -0.45
LIN52-201ENST00000553404 SMARCC1Q92922 1105 aaPredicted RBP12.22□□□□□ -0.45
LIN52-201ENST00000553404 ATG3Q9NT62 314 aa12.22□□□□□ -0.45
LIN52-201ENST00000553404 AMOTQ4VCS5 1084 aa12.22□□□□□ -0.45
LIN52-201ENST00000553404 AMIGO3Q86WK7 504 aa12.22□□□□□ -0.45
LIN52-201ENST00000553404 FHDC1Q9C0D6 1143 aaPredicted RBP12.22□□□□□ -0.45
LIN52-201ENST00000553404 VIRMAQ69YN4 1812 aaKnown RBP12.22□□□□□ -0.45
LIN52-201ENST00000553404 LOC102724428A0A0B4J2F2 783 aa12.21□□□□□ -0.45
LIN52-201ENST00000553404 TERF1P54274 439 aa12.21□□□□□ -0.45
LIN52-201ENST00000553404 SIK1P57059 783 aa12.21□□□□□ -0.45
LIN52-201ENST00000553404 SAMD1Q6SPF0 538 aaPredicted RBP12.21□□□□□ -0.45
LIN52-201ENST00000553404 ZSCAN30Q86W11 494 aa12.21□□□□□ -0.45
LIN52-201ENST00000553404 DCAF5Q96JK2 942 aa12.21□□□□□ -0.45
LIN52-201ENST00000553404 GOLGB1Q14789 3259 aaKnown RBP12.21□□□□□ -0.45
LIN52-201ENST00000553404 U2SURPO15042 1029 aaKnown RBP12.21□□□□□ -0.46
LIN52-201ENST00000553404 CCDC173Q0VFZ6 552 aa12.21□□□□□ -0.46
LIN52-201ENST00000553404 C1orf141Q5JVX7 400 aa12.21□□□□□ -0.46
LIN52-201ENST00000553404 TUBGCP6Q96RT7 1819 aa12.2□□□□□ -0.46
LIN52-201ENST00000553404 ITPK1Q13572 414 aa12.2□□□□□ -0.46
LIN52-201ENST00000553404 MSL1Q68DK7 614 aa12.2□□□□□ -0.46
LIN52-201ENST00000553404 IPO4Q8TEX9 1081 aaKnown RBP12.2□□□□□ -0.46
LIN52-201ENST00000553404 KDRP35968 1356 aa12.2□□□□□ -0.46
LIN52-201ENST00000553404 ERVV-2B6SEH9 535 aa12.2□□□□□ -0.46
LIN52-201ENST00000553404 CANXP27824 592 aaKnown RBP12.2□□□□□ -0.46
LIN52-201ENST00000553404 ATP6V1AP38606 617 aa12.2□□□□□ -0.46
LIN52-201ENST00000553404 RIPK4P57078 832 aa12.2□□□□□ -0.46
LIN52-201ENST00000553404 CABP4P57796 275 aa12.2□□□□□ -0.46
LIN52-201ENST00000553404 SMAP1Q8IYB5 467 aaPredicted RBP12.2□□□□□ -0.46
LIN52-201ENST00000553404 NFATC2IPQ8NCF5 419 aa12.2□□□□□ -0.46
LIN52-201ENST00000553404 LINC00116Q8NCU8 138 aa12.2□□□□□ -0.46
LIN52-201ENST00000553404 SYT17Q9BSW7 474 aa12.2□□□□□ -0.46
LIN52-201ENST00000553404 RBM42Q9BTD8 480 aaKnown RBP12.2□□□□□ -0.46
LIN52-201ENST00000553404 NPC1L1Q9UHC9 1359 aa12.19□□□□□ -0.46
LIN52-201ENST00000553404 KDM6AO15550 1401 aaPredicted RBP12.19□□□□□ -0.46
LIN52-201ENST00000553404 BCAR3O75815 825 aa12.19□□□□□ -0.46
LIN52-201ENST00000553404 PHF14O94880 888 aa12.19□□□□□ -0.46
LIN52-201ENST00000553404 HSP90AB1P08238 724 aaKnown RBP12.19□□□□□ -0.46
LIN52-201ENST00000553404 BBXQ8WY36 941 aaPredicted RBP12.19□□□□□ -0.46
LIN52-201ENST00000553404 CLUAP1Q96AJ1 413 aa12.19□□□□□ -0.46
LIN52-201ENST00000553404 SLC4A9Q96Q91 983 aa12.19□□□□□ -0.46
LIN52-201ENST00000553404 LGR6Q9HBX8 967 aa12.19□□□□□ -0.46
LIN52-201ENST00000553404 SLFN5Q08AF3 891 aa12.19□□□□□ -0.46
LIN52-201ENST00000553404 MTERF4Q7Z6M4 381 aaKnown RBP12.19□□□□□ -0.46
LIN52-201ENST00000553404 SLC16A10Q8TF71 515 aa12.19□□□□□ -0.46
LIN52-201ENST00000553404 AK7Q96M32 723 aa12.19□□□□□ -0.46
LIN52-201ENST00000553404 MTHFSDQ2M296 383 aaKnown RBP12.18□□□□□ -0.46
LIN52-201ENST00000553404 SKOR2Q2VWA4 1001 aaPredicted RBP12.18□□□□□ -0.46
LIN52-201ENST00000553404 GAS2L3Q86XJ1 694 aa12.18□□□□□ -0.46
LIN52-201ENST00000553404 HSCBQ8IWL3 235 aa12.18□□□□□ -0.46
LIN52-201ENST00000553404 R3HCC1Q9Y3T6 440 aaKnown RBP12.18□□□□□ -0.46
LIN52-201ENST00000553404 PTCD1O75127 700 aaKnown RBP12.17□□□□□ -0.46
LIN52-201ENST00000553404 TAF1LQ8IZX4 1826 aa12.17□□□□□ -0.46
LIN52-201ENST00000553404 GBP4Q96PP9 640 aa12.17□□□□□ -0.46
LIN52-201ENST00000553404 C5P01031 1676 aa12.17□□□□□ -0.46
LIN52-201ENST00000553404 ZNF521Q96K83 1311 aa12.16□□□□□ -0.46
LIN52-201ENST00000553404 POLD1P28340 1107 aa12.16□□□□□ -0.46
LIN52-201ENST00000553404 PPP2R1AP30153 589 aa12.16□□□□□ -0.46
LIN52-201ENST00000553404 NASPP49321 788 aaPredicted RBP12.16□□□□□ -0.46
LIN52-201ENST00000553404 AKAP4Q5JQC9 854 aa12.16□□□□□ -0.46
LIN52-201ENST00000553404 C22orf23Q9BZE7 217 aa12.16□□□□□ -0.46
LIN52-201ENST00000553404 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.16□□□□□ -0.46
LIN52-201ENST00000553404 PTMSP20962 102 aa12.16□□□□□ -0.46
LIN52-201ENST00000553404 PDE3AQ14432 1141 aa12.16□□□□□ -0.46
LIN52-201ENST00000553404 ARID3AQ99856 593 aa12.16□□□□□ -0.46
LIN52-201ENST00000553404 PLEKHG2Q9H7P9 1386 aa12.15□□□□□ -0.46
LIN52-201ENST00000553404 GNPATO15228 680 aa12.15□□□□□ -0.46
LIN52-201ENST00000553404 PPP1R9BQ96SB3 815 aa12.15□□□□□ -0.46
LIN52-201ENST00000553404 CHMP4BQ9H444 224 aaKnown RBP12.15□□□□□ -0.46
LIN52-201ENST00000553404 COG6Q9Y2V7 657 aa12.15□□□□□ -0.46
LIN52-201ENST00000553404 C4BP0C0L5 1744 aa12.15□□□□□ -0.46
LIN52-201ENST00000553404 COL3A1P02461 1466 aaPredicted RBP12.15□□□□□ -0.46
LIN52-201ENST00000553404 QSER1Q2KHR3 1735 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms